RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 SCXQ7RTU7 201 aa3.18□□□□□ -1.9
U2AF1-207ENST00000468039 C18orf32Q8TCD1 76 aa3.18□□□□□ -1.9
U2AF1-207ENST00000468039 TOMM6Q96B49 74 aa3.18□□□□□ -1.9
U2AF1-207ENST00000468039 TMEM141Q96I45 108 aa3.18□□□□□ -1.9
U2AF1-207ENST00000468039 IGLV4-69A0A075B6H9 119 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 LINC01546A6NGU7 62 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 IGIPA6NJ69 53 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 K7EMI3 77 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 TRGC2P03986 189 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 UBE2D1P51668 147 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 COX6A2Q02221 97 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 SPAG11BQ08648 103 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 TEX43Q6ZNM6 134 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 Q6ZSA8 131 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 MRPL55Q7Z7F7 128 aaKnown RBP3.17□□□□□ -1.9
U2AF1-207ENST00000468039 C9orf163Q8N9P6 203 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 SCGB3A1Q96QR1 104 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 AMELXQ99217 191 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 C2orf88Q9BSF0 95 aa3.17□□□□□ -1.9
U2AF1-207ENST00000468039 LRP1Q07954 4544 aaKnown RBP3.16□□□□□ -1.9
U2AF1-207ENST00000468039 A0A096LNJ9 63 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.16□□□□□ -1.9
U2AF1-207ENST00000468039 IGHV3OR16-9A0A0B4J2B5 98 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 A0A0J9YXV3 536 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 COLCA2A8K830 154 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 LINC00614P0C842 121 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 Q5VSD8 79 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 Q6ZRU5 148 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 Q6ZVH6 145 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 CIRBP-AS1Q8TBR5 109 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 CARD19Q96LW7 228 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 TIMM17AQ99595 171 aa3.16□□□□□ -1.9
U2AF1-207ENST00000468039 IGHV3-64A0A075B6Q5 118 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 IGKV2-24A0A0C4DH68 120 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 FAM240AA0A1B0GVK7 77 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 APOMO95445 188 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 HBDP02042 147 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 NDUFA6P56556 154 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 SYCNQ0VAF6 134 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 SDIM1Q6ZPB5 146 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 C7orf33Q8WU49 177 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 CAMK2N2Q96S95 79 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 CHAC1Q9BUX1 264 aa3.15□□□□□ -1.91
U2AF1-207ENST00000468039 HERC1Q15751 4861 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 A0A096LNI7 61 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 G0S2P27469 103 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 PMVKQ15126 192 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 PDZD11Q5EBL8 140 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 BAGE3Q86Y29 109 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 FAM19A2Q8N3H0 131 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 OR10D4PQ8NGN7 298 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 SPACA4Q8TDM5 124 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 CST9LQ9H4G1 147 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 TOMM7Q9P0U1 55 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 CDKN2A-AS1Q9UH64 79 aa3.14□□□□□ -1.91
U2AF1-207ENST00000468039 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.13□□□□□ -1.91
U2AF1-207ENST00000468039 NUPR1O60356 82 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 SERF1AO75920 110 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 SPINK8P0C7L1 97 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 RAB5BP61020 215 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 C2orf82Q6UX34 121 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 UNQ6190/PRO20217Q6UXQ8 127 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 FAM19A3Q7Z5A8 133 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 CHCHD1Q96BP2 118 aaKnown RBP3.13□□□□□ -1.91
U2AF1-207ENST00000468039 DPH3Q96FX2 82 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 PACRGQ96M98 296 aaPredicted RBP3.13□□□□□ -1.91
U2AF1-207ENST00000468039 C6orf48Q9UBA6 75 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 TNXBP22105 4242 aa3.13□□□□□ -1.91
U2AF1-207ENST00000468039 TINCRA0A1B0GVN0 87 aa3.12□□□□□ -1.91
U2AF1-207ENST00000468039 H0Y9J4 135 aa3.12□□□□□ -1.91
U2AF1-207ENST00000468039 NDUFA1O15239 70 aa3.12□□□□□ -1.91
U2AF1-207ENST00000468039 HERVK_113P63121 156 aa3.12□□□□□ -1.91
U2AF1-207ENST00000468039 CIRBPQ14011 172 aaKnown RBP3.12□□□□□ -1.91
U2AF1-207ENST00000468039 C9orf116Q5BN46 136 aaPredicted RBP3.12□□□□□ -1.91
U2AF1-207ENST00000468039 LOC107984640A0A0U1RRK4 108 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 FAM168BA1KXE4 195 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 LINC01549A6NIU2 74 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 C11orf86A6NJI1 115 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 INAFM2P0DMQ5 153 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 IGLC3P0DOY3 106 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 ZNF22P17026 224 aaPredicted RBP3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 SEC11AP67812 179 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
U2AF1-207ENST00000468039 MRPL35Q9NZE8 188 aaKnown RBP3.11□□□□□ -1.91
U2AF1-207ENST00000468039 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
U2AF1-207ENST00000468039 A0A1W2PNN7 141 aa3.1□□□□□ -1.91
U2AF1-207ENST00000468039 LEPROTL1O95214 131 aa3.1□□□□□ -1.91
U2AF1-207ENST00000468039 FABP4P15090 132 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms