RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 RBP4P02753 201 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 AKAIN1P0CW23 69 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 HIST1H1DP16402 221 aaKnown RBP0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 IQCJQ1A5X6 159 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 DEFB110Q30KQ9 67 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 PYY3Q5JQD4 70 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 Q6ZUT4 128 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 ZNF720Q7Z2F6 126 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 ACBD7Q8N6N7 88 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 LCN9Q8WX39 176 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 DSCR8Q96T75 97 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 PDCD10Q9BUL8 212 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 AGPAT4-IT1Q9H0P7 198 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 LINC00312Q9Y6C7 94 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 TANC2Q9HCD6 1990 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 DYNC2H1Q8NCM8 4307 aaKnown RBP0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 ABCA4P78363 2273 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 PKDREJQ9NTG1 2253 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 VPS13CQ709C8 3753 aa0.66□□□□□ -2.3
GAPVD1-211ENST00000467707 KNL1Q8NG31 2342 aa0.65□□□□□ -2.3
GAPVD1-211ENST00000467707 ABCA13Q86UQ4 5058 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 TRBV20-1A0A075B6N2 111 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 TRAV12-2A0A075B6T6 113 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 LCE6AA0A183 80 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 TMEM218A2RU14 115 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 DEFB108AA8MXU0 73 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 MT-ATP8P03928 68 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 S100A10P60903 97 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 GNGT1P63211 74 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 MRPS10P82664 201 aaKnown RBP0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 CLLU1Q5K131 121 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 SLC25A26Q70HW3 274 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 C8orf59Q8N0T1 100 aaPredicted RBP0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 DEFB106AQ8N104 65 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 PPP1R1CQ8WVI7 109 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 SEC11CQ9BY50 192 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 PRO1933Q9H354 126 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 RPRMQ9NS64 109 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 IER3IP1Q9Y5U9 82 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 ZANQ9Y493 2812 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 MYO7BQ6PIF6 2116 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 NINQ8N4C6 2090 aa0.65□□□□□ -2.31
GAPVD1-211ENST00000467707 HERC1Q15751 4861 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 TENM2Q9NT68 2774 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 DNAH1Q9P2D7 4330 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 TEX49A0A1B0GTD5 131 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 J3QR89 54 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 M0R2P5 195 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 SPINK8P0C7L1 97 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 TRAPPC2P0DI81 140 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 TRAPPC2BP0DI82 140 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 PYYP10082 97 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 TPPP2P59282 170 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 UBA52P62987 128 aaKnown RBP0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 INSL4Q14641 139 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 COL5A1-AS1Q5SY13 56 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 Q6AWC8 147 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 TTC9CQ8N5M4 171 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 Q8N8P6 123 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 ATP6V0E2Q8NHE4 81 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 COX14Q96I36 57 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 RERGLQ9H628 205 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 TMEM14BQ9NUH8 114 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 SERP1Q9Y6X1 66 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 ANK2Q01484 3957 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 SONP18583 2426 aaKnown RBP0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 AKAP6Q13023 2319 aa0.64□□□□□ -2.31
GAPVD1-211ENST00000467707 RNF213Q63HN8 5207 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 A0A087WXM4 84 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 A0A096LNT2 108 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 CXorf51AA0A1B0GTR3 108 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 TCRBV3S1A0A5B6 114 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 CLPSL1A2RUU4 121 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 RBAKDNA6NC62 111 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 MCRIP1C9JLW8 97 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 H0YGG7 62 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 PIRTP0C851 137 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 IGLC1P0CG04 106 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 TDRG1Q3Y452 100 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 C9orf153Q5TBE3 101 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 MRPL54Q6P161 138 aaKnown RBP0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 KCNRGQ8N5I3 272 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 TSKUQ8WUA8 353 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 C10orf82Q8WW14 230 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 S100ZQ8WXG8 99 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 TSLPQ969D9 159 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 BPESC1Q9GZL8 116 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 CCDC167Q9P0B6 97 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 LINC00474Q9P2X8 69 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 AP4S1Q9Y587 144 aa0.63□□□□□ -2.31
GAPVD1-211ENST00000467707 HRNRQ86YZ3 2850 aaPredicted RBP0.62□□□□□ -2.31
GAPVD1-211ENST00000467707 TMEM262E9PQX1 116 aa0.62□□□□□ -2.31
GAPVD1-211ENST00000467707 TFF1P04155 84 aa0.62□□□□□ -2.31
GAPVD1-211ENST00000467707 IFITM1P13164 125 aa0.62□□□□□ -2.31
GAPVD1-211ENST00000467707 GUCA1AP43080 201 aaPredicted RBP0.62□□□□□ -2.31
GAPVD1-211ENST00000467707 Q56UQ5 140 aa0.62□□□□□ -2.31
GAPVD1-211ENST00000467707 LINC01545Q5VT33 79 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms