RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663		A6NDN8	102 aa		7.82	□□□□□ -1.16
CTNS-205	ENST00000467663	SMIM13	P0DJ93	91 aa		7.82	□□□□□ -1.16
CTNS-205	ENST00000467663	CNBP	P62633	177 aa	Known RBP	7.82	□□□□□ -1.16
CTNS-205	ENST00000467663	BVES-AS1	Q5T3Y7	98 aa		7.82	□□□□□ -1.16
CTNS-205	ENST00000467663	ARL17A	Q8IVW1	177 aa		7.82	□□□□□ -1.16
CTNS-205	ENST00000467663	CARD19	Q96LW7	228 aa		7.82	□□□□□ -1.16
CTNS-205	ENST00000467663	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	7.81	□□□□□ -1.16
CTNS-205	ENST00000467663	SMR3B	P02814	79 aa	Predicted RBP	7.81	□□□□□ -1.16
CTNS-205	ENST00000467663	TLX1NB	P0CAT3	122 aa		7.81	□□□□□ -1.16
CTNS-205	ENST00000467663		Q6ZSA8	131 aa		7.81	□□□□□ -1.16
CTNS-205	ENST00000467663	C6orf48	Q9UBA6	75 aa		7.81	□□□□□ -1.16
CTNS-205	ENST00000467663	INAFM2	P0DMQ5	153 aa		7.8	□□□□□ -1.16
CTNS-205	ENST00000467663	PFN2	P35080	140 aa		7.8	□□□□□ -1.16
CTNS-205	ENST00000467663	HINT1	P49773	126 aa	Predicted RBP	7.8	□□□□□ -1.16
CTNS-205	ENST00000467663	HAMP	P81172	84 aa		7.8	□□□□□ -1.16
CTNS-205	ENST00000467663	ADAMTSL4-AS1	Q5T5F5	129 aa		7.8	□□□□□ -1.16
CTNS-205	ENST00000467663		Q6ZRU5	148 aa		7.8	□□□□□ -1.16
CTNS-205	ENST00000467663	MIR7-3HG	Q8N6C7	128 aa		7.8	□□□□□ -1.16
CTNS-205	ENST00000467663	LINC00308	Q8TCZ7	52 aa		7.8	□□□□□ -1.16
CTNS-205	ENST00000467663	NDUFC2-KCTD14	E9PQ53	114 aa		7.79	□□□□□ -1.16
CTNS-205	ENST00000467663	FAM229A	H3BQW9	127 aa		7.79	□□□□□ -1.16
CTNS-205	ENST00000467663	C10orf25	Q5T742	122 aa		7.79	□□□□□ -1.16
CTNS-205	ENST00000467663	MUSTN1	Q8IVN3	82 aa		7.79	□□□□□ -1.16
CTNS-205	ENST00000467663	LINC00526	Q96FQ7	95 aa		7.78	□□□□□ -1.16
CTNS-205	ENST00000467663	SNHG12	Q9BXW3	62 aa		7.78	□□□□□ -1.16
CTNS-205	ENST00000467663	NDUFC2	O95298	119 aa		7.77	□□□□□ -1.17
CTNS-205	ENST00000467663	COL5A1-AS1	Q5SY13	56 aa		7.77	□□□□□ -1.17
CTNS-205	ENST00000467663	FAT1	Q14517	4588 aa		7.77	□□□□□ -1.17
CTNS-205	ENST00000467663		A0A0B4J2C4	111 aa		7.76	□□□□□ -1.17
CTNS-205	ENST00000467663		A0A0U1RRA0	63 aa		7.76	□□□□□ -1.17
CTNS-205	ENST00000467663	LOC107984640	A0A0U1RRK4	108 aa		7.76	□□□□□ -1.17
CTNS-205	ENST00000467663		A0A1B0GWB2	263 aa		7.76	□□□□□ -1.17
CTNS-205	ENST00000467663	FXYD2	P54710	66 aa		7.76	□□□□□ -1.17
CTNS-205	ENST00000467663	LINC01620	Q4KN68	170 aa		7.76	□□□□□ -1.17
CTNS-205	ENST00000467663		A4D1N5	150 aa		7.75	□□□□□ -1.17
CTNS-205	ENST00000467663	BATF	Q16520	125 aa		7.75	□□□□□ -1.17
CTNS-205	ENST00000467663	C9orf116	Q5BN46	136 aa	Predicted RBP	7.75	□□□□□ -1.17
CTNS-205	ENST00000467663	SND1-IT1	Q9HBX3	110 aa		7.75	□□□□□ -1.17
CTNS-205	ENST00000467663	SLPI	P03973	132 aa		7.74	□□□□□ -1.17
CTNS-205	ENST00000467663	DAND5	Q8N907	189 aa		7.74	□□□□□ -1.17
CTNS-205	ENST00000467663	C9orf163	Q8N9P6	203 aa		7.74	□□□□□ -1.17
CTNS-205	ENST00000467663	TRAV13-2	A0A0B4J235	113 aa		7.73	□□□□□ -1.17
CTNS-205	ENST00000467663	RAB37	Q96AX2	223 aa		7.73	□□□□□ -1.17
CTNS-205	ENST00000467663	NHP2	Q9NX24	153 aa	Known RBP	7.73	□□□□□ -1.17
CTNS-205	ENST00000467663	PLA2G2D	Q9UNK4	145 aa		7.73	□□□□□ -1.17
CTNS-205	ENST00000467663	DNAH8	Q96JB1	4490 aa		7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	SRRM2	Q9UQ35	2752 aa	Known RBP	7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	VPS13B	Q7Z7G8	4022 aa		7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	CFC1B	P0CG36	223 aa		7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	CFC1	P0CG37	223 aa		7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	SOSTDC1	Q6X4U4	206 aa		7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	SCX	Q7RTU7	201 aa		7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	LINC00474	Q9P2X8	69 aa		7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	PRO1854	Q9UHT4	67 aa		7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	CBY1	Q9Y3M2	126 aa		7.72	□□□□□ -1.17
CTNS-205	ENST00000467663	TRBV10-2	A0A0K0K1G8	114 aa		7.71	□□□□□ -1.18
CTNS-205	ENST00000467663	PLA2G1B	P04054	148 aa	Known RBP	7.71	□□□□□ -1.18
CTNS-205	ENST00000467663	NPC2	P61916	151 aa		7.71	□□□□□ -1.18
CTNS-205	ENST00000467663		Q6ZRP5	223 aa		7.71	□□□□□ -1.18
CTNS-205	ENST00000467663	LINC00528	Q8N1L1	170 aa		7.71	□□□□□ -1.18
CTNS-205	ENST00000467663	CIRBP-AS1	Q8TBR5	109 aa		7.7	□□□□□ -1.18
CTNS-205	ENST00000467663	RPL18A	Q02543	176 aa	Known RBP	7.69	□□□□□ -1.18
CTNS-205	ENST00000467663	EIF4EBP3	O60516	100 aa	Predicted RBP	7.68	□□□□□ -1.18
CTNS-205	ENST00000467663	GAGE2E	Q4V326	116 aa		7.68	□□□□□ -1.18
CTNS-205	ENST00000467663	TMEM126A	Q9H061	195 aa		7.68	□□□□□ -1.18
CTNS-205	ENST00000467663	GAGE2D	Q9UEU5	116 aa		7.68	□□□□□ -1.18
CTNS-205	ENST00000467663	FLG2	Q5D862	2391 aa	Predicted RBP	7.68	□□□□□ -1.18
CTNS-205	ENST00000467663	DMBT1	Q9UGM3	2413 aa	Predicted RBP	7.67	□□□□□ -1.18
CTNS-205	ENST00000467663	IGLV5-37	A0A075B6J1	123 aa		7.67	□□□□□ -1.18
CTNS-205	ENST00000467663	XAGE1A	Q9HD64	81 aa		7.67	□□□□□ -1.18
CTNS-205	ENST00000467663	C9orf118	A6NHY6	69 aa		7.66	□□□□□ -1.18
CTNS-205	ENST00000467663	KRTAP10-4	P60372	401 aa	Predicted RBP	7.66	□□□□□ -1.18
CTNS-205	ENST00000467663	LYRM7	Q5U5X0	104 aa		7.66	□□□□□ -1.18
CTNS-205	ENST00000467663	SDIM1	Q6ZPB5	146 aa		7.66	□□□□□ -1.18
CTNS-205	ENST00000467663	IGKV2-28	A0A075B6P5	120 aa		7.65	□□□□□ -1.18
CTNS-205	ENST00000467663		M0R378	163 aa		7.65	□□□□□ -1.18
CTNS-205	ENST00000467663	TAX1BP3	O14907	124 aa		7.65	□□□□□ -1.18
CTNS-205	ENST00000467663	IGKV2D-28	P01615	120 aa		7.65	□□□□□ -1.18
CTNS-205	ENST00000467663	VPREB1	P12018	145 aa		7.65	□□□□□ -1.18
CTNS-205	ENST00000467663	GAGE2B	Q13066	116 aa		7.65	□□□□□ -1.18
CTNS-205	ENST00000467663	C9orf129	Q5T035	196 aa	Known RBP	7.65	□□□□□ -1.18
CTNS-205	ENST00000467663	MYCBP2	O75592	4640 aa		7.64	□□□□□ -1.19
CTNS-205	ENST00000467663	COX6C	P09669	75 aa		7.64	□□□□□ -1.19
CTNS-205	ENST00000467663	S100A7L2	Q5SY68	101 aa		7.64	□□□□□ -1.19
CTNS-205	ENST00000467663	NKAPP1	Q8N9T2	125 aa		7.64	□□□□□ -1.19
CTNS-205	ENST00000467663	HERC1	Q15751	4861 aa		7.63	□□□□□ -1.19
CTNS-205	ENST00000467663		K7ERJ3	54 aa		7.63	□□□□□ -1.19
CTNS-205	ENST00000467663	RPL13A	P40429	203 aa	Known RBP	7.63	□□□□□ -1.19
CTNS-205	ENST00000467663	LINC00337	Q8N6G1	96 aa		7.63	□□□□□ -1.19
CTNS-205	ENST00000467663	KRTAP3-3	Q9BYR6	98 aa		7.63	□□□□□ -1.19
CTNS-205	ENST00000467663	KRTAP3-2	Q9BYR7	98 aa		7.63	□□□□□ -1.19
CTNS-205	ENST00000467663	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.63	□□□□□ -1.19
CTNS-205	ENST00000467663		A0A096LNI7	61 aa		7.62	□□□□□ -1.19
CTNS-205	ENST00000467663	PANO1	I0J062	215 aa		7.62	□□□□□ -1.19
CTNS-205	ENST00000467663	TSPAN13	O95857	204 aa		7.62	□□□□□ -1.19
CTNS-205	ENST00000467663	RPL28	P46779	137 aa	Known RBP	7.62	□□□□□ -1.19
CTNS-205	ENST00000467663		Q1RN00	199 aa		7.62	□□□□□ -1.19
CTNS-205	ENST00000467663	OR13C6P	Q8NH95	151 aa		7.62	□□□□□ -1.19
CTNS-205	ENST00000467663	KRTAP29-1	A8MX34	341 aa	Predicted RBP	7.61	□□□□□ -1.19
CTNS-205	ENST00000467663	IGLV6-57	P01721	117 aa		7.61	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 196 ms