RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 LINC00483Q53H64 154 aa3.59□□□□□ -1.83
LRCH3-212ENST00000466845 RPS27LQ71UM5 84 aaKnown RBP3.59□□□□□ -1.83
LRCH3-212ENST00000466845 Q8NAQ8 132 aa3.59□□□□□ -1.83
LRCH3-212ENST00000466845 ITPR2Q14571 2701 aa3.59□□□□□ -1.83
LRCH3-212ENST00000466845 PCNX1Q96RV3 2341 aa3.58□□□□□ -1.84
LRCH3-212ENST00000466845 A0A096LNJ9 63 aa3.58□□□□□ -1.84
LRCH3-212ENST00000466845 TRAV10A0A0B4J240 114 aa3.58□□□□□ -1.84
LRCH3-212ENST00000466845 IGHV1-18A0A0C4DH31 117 aa3.58□□□□□ -1.84
LRCH3-212ENST00000466845 A0A1W2PNM2 257 aa3.58□□□□□ -1.84
LRCH3-212ENST00000466845 ZNRD1Q9P1U0 126 aa3.58□□□□□ -1.84
LRCH3-212ENST00000466845 PKDREJQ9NTG1 2253 aa3.58□□□□□ -1.84
LRCH3-212ENST00000466845 ANKRD17O75179 2603 aaKnown RBP3.57□□□□□ -1.84
LRCH3-212ENST00000466845 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
LRCH3-212ENST00000466845 WFDC6Q9BQY6 131 aa3.57□□□□□ -1.84
LRCH3-212ENST00000466845 CRYBG3Q68DQ2 2970 aa3.57□□□□□ -1.84
LRCH3-212ENST00000466845 CELSR2Q9HCU4 2923 aa3.57□□□□□ -1.84
LRCH3-212ENST00000466845 LRBAP50851 2863 aa3.57□□□□□ -1.84
LRCH3-212ENST00000466845 DNAJC13O75165 2243 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 IGLV7-46A0A075B6I9 117 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 ODF3BA8MYP8 253 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 IGHV3-30P01768 117 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 IGHV3-30-5P0DP03 117 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 FXYD6P3P58550 94 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 ELOF1P60002 83 aaKnown RBP3.56□□□□□ -1.84
LRCH3-212ENST00000466845 KRTAP10-3P60369 221 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 KRTAP26-1Q6PEX3 210 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 Q8N377 158 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 KLHL30-AS1Q8NEE0 82 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 LINC00167Q96N53 147 aa3.56□□□□□ -1.84
LRCH3-212ENST00000466845 INTS1Q8N201 2190 aaKnown RBP3.56□□□□□ -1.84
LRCH3-212ENST00000466845 CCDC168Q8NDH2 2452 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 FREM3P0C091 2139 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 APCP25054 2843 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 IGHV3-64DA0A0J9YX35 117 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 TRBV6-5A0A0K0K1A5 114 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 H3BQ85 93 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 SPINK4O60575 86 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 DNAL4O96015 105 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 RPL38P63173 70 aaKnown RBP3.55□□□□□ -1.84
LRCH3-212ENST00000466845 TFF3Q07654 80 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 HIGD2BQ4VC39 106 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 SPANXN5Q5MJ07 72 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 LINC00846Q9NV44 126 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 LENEPQ9Y5L5 61 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 ANKHD1Q8IWZ3 2542 aaKnown RBP3.55□□□□□ -1.84
LRCH3-212ENST00000466845 POLQO75417 2590 aa3.55□□□□□ -1.84
LRCH3-212ENST00000466845 A0A0J9YY99 117 aa3.54□□□□□ -1.84
LRCH3-212ENST00000466845 TRBV10-1A0A0K0K1A3 114 aa3.54□□□□□ -1.84
LRCH3-212ENST00000466845 LRCOL1A6NCL2 159 aa3.54□□□□□ -1.84
LRCH3-212ENST00000466845 HIGD1CA8MV81 97 aa3.54□□□□□ -1.84
LRCH3-212ENST00000466845 GIG44P09565 113 aaPredicted RBP3.54□□□□□ -1.84
LRCH3-212ENST00000466845 P0C879 139 aa3.54□□□□□ -1.84
LRCH3-212ENST00000466845 PLNP26678 52 aa3.54□□□□□ -1.84
LRCH3-212ENST00000466845 ORMDL1Q9P0S3 153 aa3.54□□□□□ -1.84
LRCH3-212ENST00000466845 LHFPL6Q9Y693 200 aa3.54□□□□□ -1.84
LRCH3-212ENST00000466845 ARHGAP32A7KAX9 2087 aa3.54□□□□□ -1.84
LRCH3-212ENST00000466845 F8P00451 2351 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 IGLV2-18A0A075B6J9 118 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 LINC01546A6NGU7 62 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 KPRPQ5T749 579 aaPredicted RBP3.53□□□□□ -1.84
LRCH3-212ENST00000466845 SPANXA2-OT1Q8N9U9 137 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 C16orf74Q96GX8 76 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 OBSCN-AS1Q96MR7 158 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 Q9BRP9 147 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 PRR34Q9NV39 138 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 PLAC8Q9NZF1 115 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 TMEM14AQ9Y6G1 99 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 MINOS1-NBL1R4GNA1 71 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 OTOGQ6ZRI0 2925 aa3.53□□□□□ -1.84
LRCH3-212ENST00000466845 TEP1Q99973 2627 aaKnown RBP3.53□□□□□ -1.84
LRCH3-212ENST00000466845 PIN1P1O15428 100 aa3.52□□□□□ -1.85
LRCH3-212ENST00000466845 NREPQ16612 68 aa3.52□□□□□ -1.85
LRCH3-212ENST00000466845 ZNF833PQ6ZTB9 187 aa3.52□□□□□ -1.85
LRCH3-212ENST00000466845 C14orf178Q8N769 122 aaPredicted RBP3.52□□□□□ -1.85
LRCH3-212ENST00000466845 CCL19Q99731 98 aa3.52□□□□□ -1.85
LRCH3-212ENST00000466845 FBN2P35556 2912 aa3.52□□□□□ -1.85
LRCH3-212ENST00000466845 C2CD3Q4AC94 2353 aa3.52□□□□□ -1.85
LRCH3-212ENST00000466845 TACC2O95359 2948 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 IGHV3-53P01767 116 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 Q1RN00 199 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 C1orf137Q5JT78 98 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 FAM74A4Q5TZK3 123 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 CSMD1Q96PZ7 3565 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 DCHS2Q6V1P9 2916 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 SPG11Q96JI7 2443 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 PDZD2O15018 2839 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 MED12Q93074 2177 aa3.51□□□□□ -1.85
LRCH3-212ENST00000466845 A0A1B0GUT8 65 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 PPP1R17O96001 155 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 DSCR10P59022 87 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 SPAG11BQ08648 103 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 SPAG11AQ6PDA7 123 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 ENHOQ6UWT2 76 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 Q86TA4 180 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 ADGRG4Q8IZF6 3080 aa3.5□□□□□ -1.85
LRCH3-212ENST00000466845 AKAP6Q13023 2319 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms