RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 MRPS36P82909 103 aaKnown RBP3.01□□□□□ -1.93
NCL-208ENST00000466274 MOBPQ13875 183 aa3.01□□□□□ -1.93
NCL-208ENST00000466274 Q6ZN92 141 aa3.01□□□□□ -1.93
NCL-208ENST00000466274 ALKBH7Q9BT30 221 aaPredicted RBP3.01□□□□□ -1.93
NCL-208ENST00000466274 SPANXA1Q9NS26 97 aa3.01□□□□□ -1.93
NCL-208ENST00000466274 A8MU10 97 aa3□□□□□ -1.93
NCL-208ENST00000466274 TMEM238C9JI98 176 aa3□□□□□ -1.93
NCL-208ENST00000466274 K7EN84 100 aa3□□□□□ -1.93
NCL-208ENST00000466274 MT1FP04733 61 aa3□□□□□ -1.93
NCL-208ENST00000466274 CXCL5P42830 114 aa3□□□□□ -1.93
NCL-208ENST00000466274 Q8IZM0 81 aa3□□□□□ -1.93
NCL-208ENST00000466274 MBD3L1Q8WWY6 194 aa3□□□□□ -1.93
NCL-208ENST00000466274 SMIM12Q96EX1 92 aa3□□□□□ -1.93
NCL-208ENST00000466274 LIMD2Q9BT23 127 aa3□□□□□ -1.93
NCL-208ENST00000466274 KMT2DO14686 5537 aa3□□□□□ -1.93
NCL-208ENST00000466274 BORCS7-ASMTA0A0B4J1R7 106 aa2.99□□□□□ -1.93
NCL-208ENST00000466274 SMKR1H3BMG3 65 aa2.99□□□□□ -1.93
NCL-208ENST00000466274 M0R378 163 aa2.99□□□□□ -1.93
NCL-208ENST00000466274 PPP1R2P9O14990 202 aa2.99□□□□□ -1.93
NCL-208ENST00000466274 RIGQ13278 110 aa2.99□□□□□ -1.93
NCL-208ENST00000466274 AKAP14Q86UN6 197 aa2.99□□□□□ -1.93
NCL-208ENST00000466274 BORCS7Q96B45 105 aa2.99□□□□□ -1.93
NCL-208ENST00000466274 FXYD6-FXYD2A0A087WZ82 144 aa2.98□□□□□ -1.93
NCL-208ENST00000466274 RPL39P62891 51 aaKnown RBP2.98□□□□□ -1.93
NCL-208ENST00000466274 LINC00483Q53H64 154 aa2.98□□□□□ -1.93
NCL-208ENST00000466274 FAM19A3Q7Z5A8 133 aa2.98□□□□□ -1.93
NCL-208ENST00000466274 FAM213BQ8TBF2 198 aa2.98□□□□□ -1.93
NCL-208ENST00000466274 SFT2D1Q8WV19 159 aa2.98□□□□□ -1.93
NCL-208ENST00000466274 TRBV20-1A0A075B6N2 111 aa2.97□□□□□ -1.93
NCL-208ENST00000466274 GNG4P50150 75 aa2.97□□□□□ -1.93
NCL-208ENST00000466274 PET117Q6UWS5 81 aa2.97□□□□□ -1.93
NCL-208ENST00000466274 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
NCL-208ENST00000466274 KCNRGQ8N5I3 272 aa2.97□□□□□ -1.93
NCL-208ENST00000466274 OCC1Q8TAD7 63 aa2.97□□□□□ -1.93
NCL-208ENST00000466274 TIMM17AQ99595 171 aa2.97□□□□□ -1.93
NCL-208ENST00000466274 C2orf88Q9BSF0 95 aa2.97□□□□□ -1.93
NCL-208ENST00000466274 SMLR1H3BR10 107 aa2.96□□□□□ -1.94
NCL-208ENST00000466274 SCO1O75880 301 aa2.96□□□□□ -1.94
NCL-208ENST00000466274 GIPP09681 153 aaPredicted RBP2.96□□□□□ -1.94
NCL-208ENST00000466274 IFI27P40305 119 aaPredicted RBP2.96□□□□□ -1.94
NCL-208ENST00000466274 AMN1Q8IY45 258 aa2.96□□□□□ -1.94
NCL-208ENST00000466274 FAM218AQ96MZ4 157 aa2.96□□□□□ -1.94
NCL-208ENST00000466274 GNG13Q9P2W3 67 aa2.96□□□□□ -1.94
NCL-208ENST00000466274 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
NCL-208ENST00000466274 RAB4AP20338 218 aa2.95□□□□□ -1.94
NCL-208ENST00000466274 TAGLN2P37802 199 aaKnown RBP2.95□□□□□ -1.94
NCL-208ENST00000466274 SEC11AP67812 179 aa2.95□□□□□ -1.94
NCL-208ENST00000466274 C9orf153Q5TBE3 101 aa2.95□□□□□ -1.94
NCL-208ENST00000466274 TEX43Q6ZNM6 134 aa2.95□□□□□ -1.94
NCL-208ENST00000466274 ATP11AUNQ6ZP68 121 aa2.95□□□□□ -1.94
NCL-208ENST00000466274 LINC00299Q6ZSB3 139 aa2.95□□□□□ -1.94
NCL-208ENST00000466274 SMCR5Q8TEV8 140 aa2.95□□□□□ -1.94
NCL-208ENST00000466274 TMEM191AQ9H0A3 160 aa2.95□□□□□ -1.94
NCL-208ENST00000466274 C5orf52A6NGY3 159 aa2.94□□□□□ -1.94
NCL-208ENST00000466274 ARPC5O15511 151 aa2.94□□□□□ -1.94
NCL-208ENST00000466274 RAB5BP61020 215 aa2.94□□□□□ -1.94
NCL-208ENST00000466274 C6orf99Q4VX62 202 aa2.94□□□□□ -1.94
NCL-208ENST00000466274 Q8NDZ9 215 aa2.94□□□□□ -1.94
NCL-208ENST00000466274 TMEM141Q96I45 108 aa2.94□□□□□ -1.94
NCL-208ENST00000466274 C20orf78Q9BR46 151 aa2.94□□□□□ -1.94
NCL-208ENST00000466274 A8MWL6 223 aa2.93□□□□□ -1.94
NCL-208ENST00000466274 S100ZQ8WXG8 99 aa2.93□□□□□ -1.94
NCL-208ENST00000466274 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 IGLV4-3A0A075B6K6 122 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 A0A1B0GUT8 65 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 ETDCA0A1B0GVM5 59 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 RAB5AP20339 215 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 HERVK_113P63121 156 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 C20orf166-AS1Q96NR2 134 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 EIF5A2Q9GZV4 153 aaKnown RBP2.92□□□□□ -1.94
NCL-208ENST00000466274 VCX2Q9H322 139 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 MANBALQ9NQG1 85 aa2.92□□□□□ -1.94
NCL-208ENST00000466274 LINC00862A6NCI5 91 aa2.91□□□□□ -1.94
NCL-208ENST00000466274 UMAD1C9J7I0 102 aa2.91□□□□□ -1.94
NCL-208ENST00000466274 PDE6DO43924 150 aa2.91□□□□□ -1.94
NCL-208ENST00000466274 ATP5LO75964 103 aa2.91□□□□□ -1.94
NCL-208ENST00000466274 RAB14P61106 215 aa2.91□□□□□ -1.94
NCL-208ENST00000466274 S100A12P80511 92 aa2.91□□□□□ -1.94
NCL-208ENST00000466274 MRPL51Q4U2R6 128 aaKnown RBP2.91□□□□□ -1.94
NCL-208ENST00000466274 C10orf91Q5T1B1 145 aa2.91□□□□□ -1.94
NCL-208ENST00000466274 MED9Q9NWA0 146 aa2.91□□□□□ -1.94
NCL-208ENST00000466274 TRAV9-1A0A075B6T8 112 aa2.9□□□□□ -1.95
NCL-208ENST00000466274 FAM236DA0A1B0GTK5 79 aa2.9□□□□□ -1.95
NCL-208ENST00000466274 HIGD1CA8MV81 97 aa2.9□□□□□ -1.95
NCL-208ENST00000466274 GATCO43716 136 aaKnown RBP2.9□□□□□ -1.95
NCL-208ENST00000466274 FAM236CP0DP71 79 aa2.9□□□□□ -1.95
NCL-208ENST00000466274 COX7B2Q8TF08 81 aa2.9□□□□□ -1.95
NCL-208ENST00000466274 TRBV24-1A0A075B6N3 115 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 NPYP01303 97 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 PFN2P35080 140 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 ZNF345Q14585 488 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 PDZD11Q5EBL8 140 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 HRCT1Q6UXD1 115 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 Q6ZVQ6 151 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 SMIM2Q9BVW6 85 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 SND1-IT1Q9HBX3 110 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 BATF3Q9NR55 127 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 CDKN2A-AS1Q9UH64 79 aa2.89□□□□□ -1.95
NCL-208ENST00000466274 TEX46H3BTG2 121 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms