RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 MT1XP80297 61 aa-0.99□□□□□ -2.57
LRCH3-211ENST00000466054 C9orf153Q5TBE3 101 aa-0.99□□□□□ -2.57
LRCH3-211ENST00000466054 FAM223AQ8IWN6 122 aa-0.99□□□□□ -2.57
LRCH3-211ENST00000466054 ARL2-SNX15V9GYD0 113 aa-0.99□□□□□ -2.57
LRCH3-211ENST00000466054 EHBP1L1Q8N3D4 1523 aa-0.99□□□□□ -2.57
LRCH3-211ENST00000466054 SETBP1Q9Y6X0 1596 aa-1□□□□□ -2.57
LRCH3-211ENST00000466054 KIAA0556O60303 1618 aa-1□□□□□ -2.57
LRCH3-211ENST00000466054 CUL7Q14999 1698 aa-1□□□□□ -2.57
LRCH3-211ENST00000466054 KNDC1Q76NI1 1749 aa-1□□□□□ -2.57
LRCH3-211ENST00000466054 LINC00959A0A1B0GUT2 108 aa-1□□□□□ -2.57
LRCH3-211ENST00000466054 C9orf62Q8N4C0 152 aa-1□□□□□ -2.57
LRCH3-211ENST00000466054 RANBP2P49792 3224 aaKnown RBP-1.01□□□□□ -2.57
LRCH3-211ENST00000466054 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.01□□□□□ -2.57
LRCH3-211ENST00000466054 C9orf92A6NGG3 77 aa-1.01□□□□□ -2.57
LRCH3-211ENST00000466054 F6UZH7 168 aa-1.01□□□□□ -2.57
LRCH3-211ENST00000466054 KRTAP20-1Q3LI63 56 aa-1.01□□□□□ -2.57
LRCH3-211ENST00000466054 DPH3P1Q9H4G8 78 aa-1.01□□□□□ -2.57
LRCH3-211ENST00000466054 NALCNQ8IZF0 1738 aa-1.02□□□□□ -2.57
LRCH3-211ENST00000466054 LINC01600Q96MT4 127 aa-1.02□□□□□ -2.57
LRCH3-211ENST00000466054 PRO1933Q9H354 126 aa-1.02□□□□□ -2.57
LRCH3-211ENST00000466054 LRBAP50851 2863 aa-1.02□□□□□ -2.57
LRCH3-211ENST00000466054 MYO9AB2RTY4 2548 aa-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 TLN1Q9Y490 2541 aaKnown RBP-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 DIP2CQ9Y2E4 1556 aa-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 ROCK2O75116 1388 aaKnown RBP-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 FAM24AA6NFZ4 105 aa-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 COX8AP10176 69 aa-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 GNG11P61952 73 aa-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 H1FX-AS1Q4G0G2 97 aa-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 USMG5Q96IX5 58 aa-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 CEP290O15078 2479 aa-1.03□□□□□ -2.57
LRCH3-211ENST00000466054 SYS1-DBNDD2H3BUS1 97 aa-1.04□□□□□ -2.58
LRCH3-211ENST00000466054 FDCSPQ8NFU4 85 aa-1.04□□□□□ -2.58
LRCH3-211ENST00000466054 ACACBO00763 2458 aa-1.04□□□□□ -2.58
LRCH3-211ENST00000466054 FAM186AA6NE01 2351 aa-1.04□□□□□ -2.58
LRCH3-211ENST00000466054 SPTBN5Q9NRC6 3674 aaKnown RBP-1.04□□□□□ -2.58
LRCH3-211ENST00000466054 MYOM2P54296 1465 aa-1.05□□□□□ -2.58
LRCH3-211ENST00000466054 DMXL2Q8TDJ6 3036 aa-1.05□□□□□ -2.58
LRCH3-211ENST00000466054 A0A0G2JMZ2 1700 aa-1.05□□□□□ -2.58
LRCH3-211ENST00000466054 COX6CP09669 75 aa-1.05□□□□□ -2.58
LRCH3-211ENST00000466054 BPTFQ12830 3046 aa-1.05□□□□□ -2.58
LRCH3-211ENST00000466054 C1orf167Q5SNV9 1468 aa-1.05□□□□□ -2.58
LRCH3-211ENST00000466054 SCAPERQ9BY12 1400 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 PAPPA2Q9BXP8 1791 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 UBE2D3P61077 147 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 UBE2D2P62837 147 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 Q0VG73 95 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 KRTAP19-5Q3LI72 72 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 APLNQ9ULZ1 77 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 IER3IP1Q9Y5U9 82 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 BOD1L1Q8NFC6 3051 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 COL14A1Q05707 1796 aaKnown RBP-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 ADGRL2O95490 1459 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 FMN2Q9NZ56 1722 aa-1.06□□□□□ -2.58
LRCH3-211ENST00000466054 ADGRG4Q8IZF6 3080 aa-1.07□□□□□ -2.58
LRCH3-211ENST00000466054 SCN7AQ01118 1682 aa-1.07□□□□□ -2.58
LRCH3-211ENST00000466054 SNAPC5O75971 98 aa-1.07□□□□□ -2.58
LRCH3-211ENST00000466054 MANBALQ9NQG1 85 aa-1.07□□□□□ -2.58
LRCH3-211ENST00000466054 BCORQ6W2J9 1755 aa-1.07□□□□□ -2.58
LRCH3-211ENST00000466054 MRC2Q9UBG0 1479 aa-1.07□□□□□ -2.58
LRCH3-211ENST00000466054 CICQ96RK0 1608 aaPredicted RBP-1.07□□□□□ -2.58
LRCH3-211ENST00000466054 ATMQ13315 3056 aa-1.08□□□□□ -2.58
LRCH3-211ENST00000466054 NUP188Q5SRE5 1749 aa-1.08□□□□□ -2.58
LRCH3-211ENST00000466054 XRN1Q8IZH2 1706 aaKnown RBP-1.08□□□□□ -2.58
LRCH3-211ENST00000466054 A0A1B0GWA3 101 aa-1.08□□□□□ -2.58
LRCH3-211ENST00000466054 MT1BP07438 61 aa-1.08□□□□□ -2.58
LRCH3-211ENST00000466054 RPL13AP3Q6NVV1 102 aa-1.08□□□□□ -2.58
LRCH3-211ENST00000466054 PRO1854Q9UHT4 67 aa-1.08□□□□□ -2.58
LRCH3-211ENST00000466054 TLN2Q9Y4G6 2542 aa-1.08□□□□□ -2.58
LRCH3-211ENST00000466054 MAP3K1Q13233 1512 aa-1.09□□□□□ -2.58
LRCH3-211ENST00000466054 NAP1L6A6NFF2 107 aa-1.09□□□□□ -2.58
LRCH3-211ENST00000466054 CPSF4LA6NMK7 179 aaKnown RBP-1.09□□□□□ -2.58
LRCH3-211ENST00000466054 TRAPPC2P0DI81 140 aa-1.09□□□□□ -2.58
LRCH3-211ENST00000466054 TRAPPC2BP0DI82 140 aa-1.09□□□□□ -2.58
LRCH3-211ENST00000466054 DEFB110Q30KQ9 67 aa-1.09□□□□□ -2.58
LRCH3-211ENST00000466054 MT1MQ8N339 61 aa-1.09□□□□□ -2.58
LRCH3-211ENST00000466054 MT2AP02795 61 aa-1.1□□□□□ -2.59
LRCH3-211ENST00000466054 MT1EP04732 61 aa-1.1□□□□□ -2.59
LRCH3-211ENST00000466054 MT1GP13640 62 aa-1.1□□□□□ -2.59
LRCH3-211ENST00000466054 S4R3F8 94 aa-1.1□□□□□ -2.59
LRCH3-211ENST00000466054 MARF1Q9Y4F3 1742 aaKnown RBP-1.1□□□□□ -2.59
LRCH3-211ENST00000466054 CSMD2Q7Z408 3487 aa-1.11□□□□□ -2.59
LRCH3-211ENST00000466054 FAM223BA6NKX1 122 aa-1.11□□□□□ -2.59
LRCH3-211ENST00000466054 SVBPQ8N300 66 aa-1.11□□□□□ -2.59
LRCH3-211ENST00000466054 MT1LQ93083 61 aa-1.11□□□□□ -2.59
LRCH3-211ENST00000466054 LINC00846Q9NV44 126 aa-1.11□□□□□ -2.59
LRCH3-211ENST00000466054 TOP2BQ02880 1626 aa-1.11□□□□□ -2.59
LRCH3-211ENST00000466054 ALKQ9UM73 1620 aa-1.11□□□□□ -2.59
LRCH3-211ENST00000466054 CCDC141Q6ZP82 1450 aa-1.12□□□□□ -2.59
LRCH3-211ENST00000466054 PDE4DIPQ5VU43 2346 aa-1.12□□□□□ -2.59
LRCH3-211ENST00000466054 PRUNE2Q8WUY3 3088 aa-1.12□□□□□ -2.59
LRCH3-211ENST00000466054 ZFHX4Q86UP3 3567 aa-1.12□□□□□ -2.59
LRCH3-211ENST00000466054 GNG4P50150 75 aa-1.12□□□□□ -2.59
LRCH3-211ENST00000466054 LCN9Q8WX39 176 aa-1.12□□□□□ -2.59
LRCH3-211ENST00000466054 C12orf57Q99622 126 aa-1.12□□□□□ -2.59
LRCH3-211ENST00000466054 EFCAB10A6NFE3 127 aa-1.13□□□□□ -2.59
LRCH3-211ENST00000466054 SAA2P0DJI9 122 aaPredicted RBP-1.13□□□□□ -2.59
LRCH3-211ENST00000466054 NKTRP30414 1462 aaKnown RBP-1.13□□□□□ -2.59
LRCH3-211ENST00000466054 SPTAN1Q13813 2472 aaKnown RBP-1.13□□□□□ -2.59
LRCH3-211ENST00000466054 MGAQ8IWI9 3026 aa-1.13□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms