RNA–Protein interactions for RNA: ENST00000465902.1

USP19-210, Transcript of ubiquitin specific peptidase 19, human

TSL 3

Gene USP19, Length 617 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP19-210	ENST00000465902	MRPL55	Q7Z7F7	128 aa	Known RBP	10.93	□□□□□ -0.66
USP19-210	ENST00000465902	GAGE10	A6NGK3	116 aa		10.92	□□□□□ -0.66
USP19-210	ENST00000465902	KRTDAP	P60985	99 aa		10.92	□□□□□ -0.66
USP19-210	ENST00000465902	HERV-K104	P63124	156 aa		10.92	□□□□□ -0.66
USP19-210	ENST00000465902	TP73-AS1	Q9UF72	201 aa		10.92	□□□□□ -0.66
USP19-210	ENST00000465902	PLA2G2D	Q9UNK4	145 aa		10.92	□□□□□ -0.66
USP19-210	ENST00000465902		J3QQQ9	107 aa		10.91	□□□□□ -0.66
USP19-210	ENST00000465902	SMIM13	P0DJ93	91 aa		10.91	□□□□□ -0.66
USP19-210	ENST00000465902	LGALS3	P17931	250 aa	Known RBP	10.91	□□□□□ -0.66
USP19-210	ENST00000465902	TSPEAR-AS2	P59090	65 aa		10.91	□□□□□ -0.66
USP19-210	ENST00000465902	PET117	Q6UWS5	81 aa		10.91	□□□□□ -0.66
USP19-210	ENST00000465902	RPL37AP8	A6NKH3	93 aa		10.9	□□□□□ -0.66
USP19-210	ENST00000465902	C3orf79	P0CE67	100 aa		10.9	□□□□□ -0.66
USP19-210	ENST00000465902	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
USP19-210	ENST00000465902	LINC00587	B1AMM8	73 aa		10.89	□□□□□ -0.67
USP19-210	ENST00000465902	IGLV7-43	P04211	117 aa		10.89	□□□□□ -0.67
USP19-210	ENST00000465902	RPL24	P83731	157 aa	Known RBP	10.89	□□□□□ -0.67
USP19-210	ENST00000465902	LINC01545	Q5VT33	79 aa		10.89	□□□□□ -0.67
USP19-210	ENST00000465902	LINC00167	Q96N53	147 aa		10.89	□□□□□ -0.67
USP19-210	ENST00000465902	IGLV5-37	A0A075B6J1	123 aa		10.87	□□□□□ -0.67
USP19-210	ENST00000465902	REG3G	Q6UW15	175 aa		10.87	□□□□□ -0.67
USP19-210	ENST00000465902	MIR7-3HG	Q8N6C7	128 aa		10.86	□□□□□ -0.67
USP19-210	ENST00000465902	C20orf202	A1L168	122 aa		10.85	□□□□□ -0.67
USP19-210	ENST00000465902		E9PLD3	99 aa		10.85	□□□□□ -0.67
USP19-210	ENST00000465902	S100A6	P06703	90 aa		10.85	□□□□□ -0.67
USP19-210	ENST00000465902	VPREB1	P12018	145 aa		10.85	□□□□□ -0.67
USP19-210	ENST00000465902	NMU	P48645	174 aa		10.85	□□□□□ -0.67
USP19-210	ENST00000465902	S100A2	P29034	98 aa		10.84	□□□□□ -0.67
USP19-210	ENST00000465902	DIRC1	Q969H9	104 aa		10.84	□□□□□ -0.67
USP19-210	ENST00000465902	IGKV2-28	A0A075B6P5	120 aa		10.83	□□□□□ -0.68
USP19-210	ENST00000465902	IGKV2D-28	P01615	120 aa		10.83	□□□□□ -0.68
USP19-210	ENST00000465902	BOD1L2	Q8IYS8	172 aa		10.82	□□□□□ -0.68
USP19-210	ENST00000465902	DAND5	Q8N907	189 aa		10.82	□□□□□ -0.68
USP19-210	ENST00000465902	HMCN2	Q8NDA2	5059 aa		10.81	□□□□□ -0.68
USP19-210	ENST00000465902		Q8NDZ9	215 aa		10.81	□□□□□ -0.68
USP19-210	ENST00000465902	BCE1	O60756	84 aa		10.8	□□□□□ -0.68
USP19-210	ENST00000465902	HIST3H2BB	Q8N257	126 aa		10.8	□□□□□ -0.68
USP19-210	ENST00000465902		H0Y9J4	135 aa		10.79	□□□□□ -0.68
USP19-210	ENST00000465902	LINC01600	Q96MT4	127 aa		10.79	□□□□□ -0.68
USP19-210	ENST00000465902	ATOH7	Q8N100	152 aa		10.78	□□□□□ -0.68
USP19-210	ENST00000465902	MIEN1	Q9BRT3	115 aa		10.78	□□□□□ -0.68
USP19-210	ENST00000465902	IGLV1-50	A0A075B6I6	118 aa		10.77	□□□□□ -0.69
USP19-210	ENST00000465902		A0A0J9YXY3	114 aa		10.77	□□□□□ -0.69
USP19-210	ENST00000465902		M0R378	163 aa		10.77	□□□□□ -0.69
USP19-210	ENST00000465902	NCR3	O14931	201 aa		10.77	□□□□□ -0.69
USP19-210	ENST00000465902	ZNF861P	O60384	105 aa		10.77	□□□□□ -0.69
USP19-210	ENST00000465902	RPL28	P46779	137 aa	Known RBP	10.77	□□□□□ -0.69
USP19-210	ENST00000465902	HIST1H2BL	Q99880	126 aa		10.77	□□□□□ -0.69
USP19-210	ENST00000465902	IGKV2D-26	A0A0A0MRZ7	120 aa		10.76	□□□□□ -0.69
USP19-210	ENST00000465902	MT1HL1	P0DM35	61 aa		10.76	□□□□□ -0.69
USP19-210	ENST00000465902	UBE2A	P49459	152 aa		10.76	□□□□□ -0.69
USP19-210	ENST00000465902	ZNF815P	A8K554	130 aa		10.75	□□□□□ -0.69
USP19-210	ENST00000465902	TMEM238	C9JI98	176 aa		10.75	□□□□□ -0.69
USP19-210	ENST00000465902	SNRPE	P62304	92 aa	Known RBP	10.75	□□□□□ -0.69
USP19-210	ENST00000465902	AKR1D1	P51857	326 aa		10.74	□□□□□ -0.69
USP19-210	ENST00000465902	NPC2	P61916	151 aa		10.74	□□□□□ -0.69
USP19-210	ENST00000465902	TTTY13	Q9BZ97	58 aa		10.74	□□□□□ -0.69
USP19-210	ENST00000465902	TMEM126A	Q9H061	195 aa		10.73	□□□□□ -0.69
USP19-210	ENST00000465902	ADAMTSL4-AS1	Q5T5F5	129 aa		10.72	□□□□□ -0.69
USP19-210	ENST00000465902	FAM19A1	Q7Z5A9	133 aa		10.72	□□□□□ -0.69
USP19-210	ENST00000465902	ANKRD39	Q53RE8	183 aa		10.71	□□□□□ -0.69
USP19-210	ENST00000465902	TNXB	P22105	4242 aa		10.7	□□□□□ -0.7
USP19-210	ENST00000465902	PRLH	P81277	87 aa		10.7	□□□□□ -0.7
USP19-210	ENST00000465902	LOC107984156	A0A0G2JMH3	177 aa		10.69	□□□□□ -0.7
USP19-210	ENST00000465902	SCGB1D4	Q6XE38	83 aa		10.69	□□□□□ -0.7
USP19-210	ENST00000465902	ARL17A	Q8IVW1	177 aa		10.69	□□□□□ -0.7
USP19-210	ENST00000465902	TIMM17B	O60830	172 aa		10.68	□□□□□ -0.7
USP19-210	ENST00000465902	KRTAP10-8	P60410	259 aa		10.68	□□□□□ -0.7
USP19-210	ENST00000465902	S100A12	P80511	92 aa		10.68	□□□□□ -0.7
USP19-210	ENST00000465902	PRR26	Q8N8Z3	221 aa		10.68	□□□□□ -0.7
USP19-210	ENST00000465902	TRBV10-3	A0A0K0K1G6	114 aa		10.67	□□□□□ -0.7
USP19-210	ENST00000465902	SOSTDC1	Q6X4U4	206 aa		10.67	□□□□□ -0.7
USP19-210	ENST00000465902	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.67	□□□□□ -0.7
USP19-210	ENST00000465902	C5orf52	A6NGY3	159 aa		10.66	□□□□□ -0.7
USP19-210	ENST00000465902	HSBP1L1	C9JCN9	74 aa		10.66	□□□□□ -0.7
USP19-210	ENST00000465902	PRY	O14603	147 aa		10.66	□□□□□ -0.7
USP19-210	ENST00000465902	EIF4EBP3	O60516	100 aa	Predicted RBP	10.66	□□□□□ -0.7
USP19-210	ENST00000465902	S100A7L2	Q5SY68	101 aa		10.66	□□□□□ -0.7
USP19-210	ENST00000465902	KRTAP13-1	Q8IUC0	172 aa		10.66	□□□□□ -0.7
USP19-210	ENST00000465902	TRBV10-2	A0A0K0K1G8	114 aa		10.65	□□□□□ -0.7
USP19-210	ENST00000465902	NDUFC2	O95298	119 aa		10.65	□□□□□ -0.7
USP19-210	ENST00000465902	SCGB1D1	O95968	90 aa		10.65	□□□□□ -0.7
USP19-210	ENST00000465902	KRTAP1-4	P0C5Y4	121 aa		10.65	□□□□□ -0.7
USP19-210	ENST00000465902	DDT	P30046	118 aa		10.65	□□□□□ -0.7
USP19-210	ENST00000465902	PCP2	Q8IVA1	136 aa		10.65	□□□□□ -0.7
USP19-210	ENST00000465902	LINC00308	Q8TCZ7	52 aa		10.65	□□□□□ -0.7
USP19-210	ENST00000465902	LITAF	Q99732	161 aa		10.65	□□□□□ -0.7
USP19-210	ENST00000465902	ETDC	A0A1B0GVM5	59 aa		10.63	□□□□□ -0.71
USP19-210	ENST00000465902	HIGD2A	Q9BW72	106 aa		10.63	□□□□□ -0.71
USP19-210	ENST00000465902	KCNQ1DN	Q9H478	68 aa		10.63	□□□□□ -0.71
USP19-210	ENST00000465902	UBR4	Q5T4S7	5183 aa		10.61	□□□□□ -0.71
USP19-210	ENST00000465902	SPANXC	Q9NY87	97 aa		10.61	□□□□□ -0.71
USP19-210	ENST00000465902	RPL13A	P40429	203 aa	Known RBP	10.6	□□□□□ -0.71
USP19-210	ENST00000465902	LINC00337	Q8N6G1	96 aa		10.6	□□□□□ -0.71
USP19-210	ENST00000465902	OR13C6P	Q8NH95	151 aa		10.59	□□□□□ -0.71
USP19-210	ENST00000465902	SPANXD	Q9BXN6	97 aa		10.59	□□□□□ -0.71
USP19-210	ENST00000465902	ANAPC11	Q9NYG5	84 aa		10.59	□□□□□ -0.71
USP19-210	ENST00000465902	SPRR1A	P35321	89 aa		10.58	□□□□□ -0.72
USP19-210	ENST00000465902	IGLV6-57	P01721	117 aa		10.57	□□□□□ -0.72
USP19-210	ENST00000465902	CRYGA	P11844	174 aa		10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms