RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 URB1-AS1Q96HZ7 61 aa13.1□□□□□ -0.31
USP42-205ENST00000465073 C11orf86A6NJI1 115 aa13.09□□□□□ -0.31
USP42-205ENST00000465073 TMEM170BQ5T4T1 132 aa13.09□□□□□ -0.31
USP42-205ENST00000465073 BAGE3Q86Y29 109 aa13.09□□□□□ -0.31
USP42-205ENST00000465073 C3orf22Q8N5N4 141 aa13.09□□□□□ -0.31
USP42-205ENST00000465073 HIGD2AQ9BW72 106 aa13.09□□□□□ -0.31
USP42-205ENST00000465073 SPAG11AQ6PDA7 123 aa13.08□□□□□ -0.32
USP42-205ENST00000465073 C18orf32Q8TCD1 76 aa13.08□□□□□ -0.32
USP42-205ENST00000465073 RHEBQ15382 184 aa13.07□□□□□ -0.32
USP42-205ENST00000465073 PMCHL1Q16048 86 aa13.06□□□□□ -0.32
USP42-205ENST00000465073 RPS10P5Q9NQ39 176 aa13.06□□□□□ -0.32
USP42-205ENST00000465073 LINC00158P58513 81 aa13.05□□□□□ -0.32
USP42-205ENST00000465073 PPDPFQ9H3Y8 114 aa13.05□□□□□ -0.32
USP42-205ENST00000465073 TRAPPC1Q9Y5R8 145 aa13.05□□□□□ -0.32
USP42-205ENST00000465073 IFITM2Q01629 132 aa13.04□□□□□ -0.32
USP42-205ENST00000465073 SPRR4Q96PI1 79 aa13.04□□□□□ -0.32
USP42-205ENST00000465073 C10orf91Q5T1B1 145 aa13.04□□□□□ -0.32
USP42-205ENST00000465073 ZNF706Q9Y5V0 76 aaPredicted RBP13.03□□□□□ -0.32
USP42-205ENST00000465073 COMMD7Q86VX2 200 aa13.01□□□□□ -0.33
USP42-205ENST00000465073 CHTOPQ9Y3Y2 248 aaKnown RBP13.01□□□□□ -0.33
USP42-205ENST00000465073 C4orf48Q5BLP8 95 aa13□□□□□ -0.33
USP42-205ENST00000465073 FP248Q71RG6 208 aaPredicted RBP12.99□□□□□ -0.33
USP42-205ENST00000465073 A0A0U1RRA0 63 aa12.98□□□□□ -0.33
USP42-205ENST00000465073 TMEM223A0PJW6 202 aa12.97□□□□□ -0.33
USP42-205ENST00000465073 MUC17Q685J3 4493 aa12.97□□□□□ -0.33
USP42-205ENST00000465073 PRYO14603 147 aa12.97□□□□□ -0.33
USP42-205ENST00000465073 ATP6V1G1O75348 118 aa12.97□□□□□ -0.33
USP42-205ENST00000465073 BOD1L2Q8IYS8 172 aa12.95□□□□□ -0.34
USP42-205ENST00000465073 LINC00337Q8N6G1 96 aa12.95□□□□□ -0.34
USP42-205ENST00000465073 TRAV12-1A0A0B4J245 112 aa12.94□□□□□ -0.34
USP42-205ENST00000465073 SMIM13P0DJ93 91 aa12.94□□□□□ -0.34
USP42-205ENST00000465073 KCNQ1DNQ9H478 68 aa12.94□□□□□ -0.34
USP42-205ENST00000465073 SPRR1AP35321 89 aa12.93□□□□□ -0.34
USP42-205ENST00000465073 Q8NBF4 154 aa12.93□□□□□ -0.34
USP42-205ENST00000465073 SMCR5Q8TEV8 140 aa12.92□□□□□ -0.34
USP42-205ENST00000465073 DAND5Q8N907 189 aa12.91□□□□□ -0.34
USP42-205ENST00000465073 IFI27L1Q96BM0 104 aa12.91□□□□□ -0.34
USP42-205ENST00000465073 ETDCA0A1B0GVM5 59 aa12.91□□□□□ -0.34
USP42-205ENST00000465073 NCR3O14931 201 aa12.91□□□□□ -0.34
USP42-205ENST00000465073 SPINK1P00995 79 aa12.91□□□□□ -0.34
USP42-205ENST00000465073 HERV-K104P63124 156 aa12.91□□□□□ -0.34
USP42-205ENST00000465073 MEIG1Q5JSS6 88 aa12.91□□□□□ -0.34
USP42-205ENST00000465073 LINC00587B1AMM8 73 aa12.9□□□□□ -0.34
USP42-205ENST00000465073 KRTAP4-16G5E9R7 235 aaPredicted RBP12.9□□□□□ -0.34
USP42-205ENST00000465073 MIR7-3HGQ8N6C7 128 aa12.9□□□□□ -0.34
USP42-205ENST00000465073 KRTAP13-3Q3SY46 172 aa12.89□□□□□ -0.35
USP42-205ENST00000465073 CHCHD1Q96BP2 118 aaKnown RBP12.89□□□□□ -0.35
USP42-205ENST00000465073 LINC00483Q53H64 154 aa12.87□□□□□ -0.35
USP42-205ENST00000465073 TRBV10-3A0A0K0K1G6 114 aa12.85□□□□□ -0.35
USP42-205ENST00000465073 S100A12P80511 92 aa12.85□□□□□ -0.35
USP42-205ENST00000465073 MAP1LC3CQ9BXW4 147 aa12.85□□□□□ -0.35
USP42-205ENST00000465073 NDUFA12Q9UI09 145 aa12.85□□□□□ -0.35
USP42-205ENST00000465073 ASB16-AS1Q495Z4 193 aa12.85□□□□□ -0.35
USP42-205ENST00000465073 MYMXA0A1B0GTQ4 84 aa12.84□□□□□ -0.35
USP42-205ENST00000465073 APOC3P02656 99 aa12.83□□□□□ -0.36
USP42-205ENST00000465073 SNAPINO95295 136 aa12.82□□□□□ -0.36
USP42-205ENST00000465073 GAGE2AQ6NT46 116 aa12.82□□□□□ -0.36
USP42-205ENST00000465073 B5MCH6 92 aa12.81□□□□□ -0.36
USP42-205ENST00000465073 KRTAP9-6A0A140TA67 174 aa12.8□□□□□ -0.36
USP42-205ENST00000465073 RPS29P62273 56 aaKnown RBP12.79□□□□□ -0.36
USP42-205ENST00000465073 SSBP3-AS1Q7Z2R9 100 aa12.79□□□□□ -0.36
USP42-205ENST00000465073 SVBPQ8N300 66 aa12.79□□□□□ -0.36
USP42-205ENST00000465073 LOC107984156A0A0G2JMH3 177 aa12.78□□□□□ -0.36
USP42-205ENST00000465073 NDUFA5Q16718 116 aa12.78□□□□□ -0.36
USP42-205ENST00000465073 ARL17AQ8IVW1 177 aa12.78□□□□□ -0.36
USP42-205ENST00000465073 SEC61BP60468 96 aaKnown RBP12.78□□□□□ -0.36
USP42-205ENST00000465073 MOBPQ13875 183 aa12.78□□□□□ -0.36
USP42-205ENST00000465073 IGLV9-49A0A0B4J1Y8 123 aa12.77□□□□□ -0.37
USP42-205ENST00000465073 TRBV10-2A0A0K0K1G8 114 aa12.77□□□□□ -0.37
USP42-205ENST00000465073 HSBP1O75506 76 aa12.77□□□□□ -0.37
USP42-205ENST00000465073 ERC2-IT1O76042 136 aa12.77□□□□□ -0.37
USP42-205ENST00000465073 DDTP30046 118 aa12.77□□□□□ -0.37
USP42-205ENST00000465073 FAM19A2Q8N3H0 131 aa12.77□□□□□ -0.37
USP42-205ENST00000465073 YPEL4Q96NS1 127 aa12.77□□□□□ -0.37
USP42-205ENST00000465073 LEPROTO15243 131 aa12.74□□□□□ -0.37
USP42-205ENST00000465073 LINC01547P58512 204 aaPredicted RBP12.74□□□□□ -0.37
USP42-205ENST00000465073 Q8N377 158 aa12.74□□□□□ -0.37
USP42-205ENST00000465073 SLC25A20O43772 301 aa12.73□□□□□ -0.37
USP42-205ENST00000465073 TSPEAR-AS2P59090 65 aa12.73□□□□□ -0.37
USP42-205ENST00000465073 Q6ZRX8 168 aa12.73□□□□□ -0.37
USP42-205ENST00000465073 Q9BRP9 147 aa12.73□□□□□ -0.37
USP42-205ENST00000465073 H0Y8G0 127 aa12.72□□□□□ -0.37
USP42-205ENST00000465073 SPANXB1Q9NS25 103 aaPredicted RBP12.72□□□□□ -0.37
USP42-205ENST00000465073 KRTAP4-1Q9BYQ7 146 aa12.71□□□□□ -0.38
USP42-205ENST00000465073 PLNP26678 52 aa12.7□□□□□ -0.38
USP42-205ENST00000465073 MIEN1Q9BRT3 115 aa12.7□□□□□ -0.38
USP42-205ENST00000465073 J3QQQ9 107 aa12.69□□□□□ -0.38
USP42-205ENST00000465073 LEPROTL1O95214 131 aa12.68□□□□□ -0.38
USP42-205ENST00000465073 IGLV6-57P01721 117 aa12.68□□□□□ -0.38
USP42-205ENST00000465073 S100A7L2Q5SY68 101 aa12.68□□□□□ -0.38
USP42-205ENST00000465073 NDUFC2O95298 119 aa12.67□□□□□ -0.38
USP42-205ENST00000465073 NMUP48645 174 aa12.67□□□□□ -0.38
USP42-205ENST00000465073 JOSD1Q15040 202 aaPredicted RBP12.67□□□□□ -0.38
USP42-205ENST00000465073 HERVK_113P61574 105 aa12.65□□□□□ -0.38
USP42-205ENST00000465073 DPM2O94777 84 aa12.64□□□□□ -0.39
USP42-205ENST00000465073 LGALS3P17931 250 aaKnown RBP12.64□□□□□ -0.39
USP42-205ENST00000465073 XP32Q5T750 250 aa12.64□□□□□ -0.39
USP42-205ENST00000465073 TRAV23DV6A0A075B6W5 121 aa12.63□□□□□ -0.39
USP42-205ENST00000465073 C9orf153Q5TBE3 101 aa12.63□□□□□ -0.39
USP42-205ENST00000465073 HSPB8Q9UJY1 196 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms