RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 HIST1H2BDP58876 126 aa13.3□□□□□ -0.28
UBA3-206ENST00000464605 HIST1H2BCP62807 126 aa13.3□□□□□ -0.28
UBA3-206ENST00000464605 HIST2H2BEQ16778 126 aa13.3□□□□□ -0.28
UBA3-206ENST00000464605 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.3□□□□□ -0.28
UBA3-206ENST00000464605 HIST1H2BHQ93079 126 aa13.3□□□□□ -0.28
UBA3-206ENST00000464605 HIST1H2BNQ99877 126 aa13.3□□□□□ -0.28
UBA3-206ENST00000464605 HIST1H2BMQ99879 126 aa13.3□□□□□ -0.28
UBA3-206ENST00000464605 LINC00158P58513 81 aa13.28□□□□□ -0.28
UBA3-206ENST00000464605 LRP2P98164 4655 aa13.27□□□□□ -0.28
UBA3-206ENST00000464605 A0A0U1RRA0 63 aa13.27□□□□□ -0.29
UBA3-206ENST00000464605 TSPEAR-AS2P59090 65 aa13.27□□□□□ -0.29
UBA3-206ENST00000464605 IGLV1-50A0A075B6I6 118 aa13.26□□□□□ -0.29
UBA3-206ENST00000464605 SMIM13P0DJ93 91 aa13.26□□□□□ -0.29
UBA3-206ENST00000464605 KRTAP13-1Q8IUC0 172 aa13.26□□□□□ -0.29
UBA3-206ENST00000464605 PMCHL2Q9BQD1 86 aa13.26□□□□□ -0.29
UBA3-206ENST00000464605 IGKV2-28A0A075B6P5 120 aa13.25□□□□□ -0.29
UBA3-206ENST00000464605 IGKV2D-28P01615 120 aa13.25□□□□□ -0.29
UBA3-206ENST00000464605 PLNP26678 52 aa13.25□□□□□ -0.29
UBA3-206ENST00000464605 RPL24P83731 157 aaKnown RBP13.25□□□□□ -0.29
UBA3-206ENST00000464605 NDUFA12Q9UI09 145 aa13.25□□□□□ -0.29
UBA3-206ENST00000464605 DPM2O94777 84 aa13.24□□□□□ -0.29
UBA3-206ENST00000464605 HERV-K104P63124 156 aa13.24□□□□□ -0.29
UBA3-206ENST00000464605 LEPROTO15243 131 aa13.23□□□□□ -0.29
UBA3-206ENST00000464605 RPL28P46779 137 aaKnown RBP13.23□□□□□ -0.29
UBA3-206ENST00000464605 IGKCP01834 107 aa13.22□□□□□ -0.29
UBA3-206ENST00000464605 MAP1LC3CQ9BXW4 147 aa13.21□□□□□ -0.29
UBA3-206ENST00000464605 MYMXA0A1B0GTQ4 84 aa13.2□□□□□ -0.3
UBA3-206ENST00000464605 MEIG1Q5JSS6 88 aa13.2□□□□□ -0.3
UBA3-206ENST00000464605 MIR7-3HGQ8N6C7 128 aa13.2□□□□□ -0.3
UBA3-206ENST00000464605 PLEKHB2Q96CS7 222 aa13.2□□□□□ -0.3
UBA3-206ENST00000464605 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
UBA3-206ENST00000464605 TMEM126AQ9H061 195 aa13.19□□□□□ -0.3
UBA3-206ENST00000464605 J3QQQ9 107 aa13.18□□□□□ -0.3
UBA3-206ENST00000464605 M0R378 163 aa13.18□□□□□ -0.3
UBA3-206ENST00000464605 SYS1-DBNDD2H3BUS1 97 aa13.17□□□□□ -0.3
UBA3-206ENST00000464605 LINC00587B1AMM8 73 aa13.16□□□□□ -0.3
UBA3-206ENST00000464605 ATP6V1G1O75348 118 aa13.15□□□□□ -0.3
UBA3-206ENST00000464605 UBE2AP49459 152 aa13.15□□□□□ -0.3
UBA3-206ENST00000464605 HERVK_113P61574 105 aa13.15□□□□□ -0.3
UBA3-206ENST00000464605 COA6Q5JTJ3 125 aaKnown RBP13.15□□□□□ -0.3
UBA3-206ENST00000464605 BOD1L2Q8IYS8 172 aa13.15□□□□□ -0.3
UBA3-206ENST00000464605 A0A087X002 238 aa13.13□□□□□ -0.31
UBA3-206ENST00000464605 LOC107984156A0A0G2JMH3 177 aa13.13□□□□□ -0.31
UBA3-206ENST00000464605 RPL13AP40429 203 aaKnown RBP13.13□□□□□ -0.31
UBA3-206ENST00000464605 PRLHP81277 87 aa13.13□□□□□ -0.31
UBA3-206ENST00000464605 ARL17AQ8IVW1 177 aa13.13□□□□□ -0.31
UBA3-206ENST00000464605 NMUP48645 174 aa13.12□□□□□ -0.31
UBA3-206ENST00000464605 FAM19A1Q7Z5A9 133 aa13.12□□□□□ -0.31
UBA3-206ENST00000464605 DAND5Q8N907 189 aa13.12□□□□□ -0.31
UBA3-206ENST00000464605 RNF213Q63HN8 5207 aa13.12□□□□□ -0.31
UBA3-206ENST00000464605 E9PLD3 99 aa13.11□□□□□ -0.31
UBA3-206ENST00000464605 LGALS3P17931 250 aaKnown RBP13.11□□□□□ -0.31
UBA3-206ENST00000464605 LINC01545Q5VT33 79 aa13.11□□□□□ -0.31
UBA3-206ENST00000464605 ANAPC11Q9NYG5 84 aa13.1□□□□□ -0.31
UBA3-206ENST00000464605 LPAP08519 4548 aa13.1□□□□□ -0.31
UBA3-206ENST00000464605 NCR3O14931 201 aa13.09□□□□□ -0.31
UBA3-206ENST00000464605 PET117Q6UWS5 81 aa13.09□□□□□ -0.31
UBA3-206ENST00000464605 IGKV2D-26A0A0A0MRZ7 120 aa13.08□□□□□ -0.32
UBA3-206ENST00000464605 C3orf79P0CE67 100 aa13.07□□□□□ -0.32
UBA3-206ENST00000464605 KCNQ1DNQ9H478 68 aa13.06□□□□□ -0.32
UBA3-206ENST00000464605 A0A0J9YXY3 114 aa13.05□□□□□ -0.32
UBA3-206ENST00000464605 CRYGAP11844 174 aa13.05□□□□□ -0.32
UBA3-206ENST00000464605 SPRR1AP35321 89 aa13.05□□□□□ -0.32
UBA3-206ENST00000464605 TRBV10-3A0A0K0K1G6 114 aa13.04□□□□□ -0.32
UBA3-206ENST00000464605 PRYO14603 147 aa13.04□□□□□ -0.32
UBA3-206ENST00000464605 KRTAP13-2Q52LG2 175 aa13.04□□□□□ -0.32
UBA3-206ENST00000464605 ADAMTSL4-AS1Q5T5F5 129 aa13.04□□□□□ -0.32
UBA3-206ENST00000464605 KRTAP4-16G5E9R7 235 aaPredicted RBP13.03□□□□□ -0.32
UBA3-206ENST00000464605 EIF4EBP3O60516 100 aaPredicted RBP13.03□□□□□ -0.32
UBA3-206ENST00000464605 FAM229BQ4G0N7 80 aa13.02□□□□□ -0.33
UBA3-206ENST00000464605 SOSTDC1Q6X4U4 206 aa13.02□□□□□ -0.33
UBA3-206ENST00000464605 TRBV10-2A0A0K0K1G8 114 aa13□□□□□ -0.33
UBA3-206ENST00000464605 LINC00337Q8N6G1 96 aa13□□□□□ -0.33
UBA3-206ENST00000464605 TYMSOSQ8TAI1 123 aa12.99□□□□□ -0.33
UBA3-206ENST00000464605 LITAFQ99732 161 aa12.99□□□□□ -0.33
UBA3-206ENST00000464605 HIGD2AQ9BW72 106 aa12.99□□□□□ -0.33
UBA3-206ENST00000464605 NDUFC2O95298 119 aa12.98□□□□□ -0.33
UBA3-206ENST00000464605 KRTDAPP60985 99 aa12.98□□□□□ -0.33
UBA3-206ENST00000464605 TTTY13Q9BZ97 58 aa12.97□□□□□ -0.33
UBA3-206ENST00000464605 S100A1P23297 94 aa12.96□□□□□ -0.33
UBA3-206ENST00000464605 NPC2P61916 151 aa12.96□□□□□ -0.33
UBA3-206ENST00000464605 MIEN1Q9BRT3 115 aa12.96□□□□□ -0.33
UBA3-206ENST00000464605 SPANXB1Q9NS25 103 aaPredicted RBP12.96□□□□□ -0.33
UBA3-206ENST00000464605 DDTP30046 118 aa12.95□□□□□ -0.34
UBA3-206ENST00000464605 SPRR4Q96PI1 79 aa12.94□□□□□ -0.34
UBA3-206ENST00000464605 TIMM17BO60830 172 aa12.93□□□□□ -0.34
UBA3-206ENST00000464605 IGLV6-57P01721 117 aa12.93□□□□□ -0.34
UBA3-206ENST00000464605 SMCR5Q8TEV8 140 aa12.93□□□□□ -0.34
UBA3-206ENST00000464605 ETDCA0A1B0GVM5 59 aa12.92□□□□□ -0.34
UBA3-206ENST00000464605 ZNF815PA8K554 130 aa12.92□□□□□ -0.34
UBA3-206ENST00000464605 B5MCH6 92 aa12.92□□□□□ -0.34
UBA3-206ENST00000464605 TSPAN13O95857 204 aa12.92□□□□□ -0.34
UBA3-206ENST00000464605 LINC00308Q8TCZ7 52 aa12.91□□□□□ -0.34
UBA3-206ENST00000464605 ANKRD39Q53RE8 183 aa12.9□□□□□ -0.34
UBA3-206ENST00000464605 C3orf22Q8N5N4 141 aa12.89□□□□□ -0.35
UBA3-206ENST00000464605 C20orf202A1L168 122 aa12.87□□□□□ -0.35
UBA3-206ENST00000464605 S100A12P80511 92 aa12.87□□□□□ -0.35
UBA3-206ENST00000464605 S100A7L2Q5SY68 101 aa12.87□□□□□ -0.35
UBA3-206ENST00000464605 ATOH7Q8N100 152 aa12.87□□□□□ -0.35
UBA3-206ENST00000464605 HIST3H2BBQ8N257 126 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms