RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 HIVEP3Q5T1R4 2406 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 SORL1Q92673 2214 aa4.93□□□□□ -1.62
CLSTN1-204ENST00000464286 IGLV6-57P01721 117 aa4.93□□□□□ -1.62
CLSTN1-204ENST00000464286 COX7BP24311 80 aa4.93□□□□□ -1.62
CLSTN1-204ENST00000464286 C18orf65Q6ZTR6 163 aa4.93□□□□□ -1.62
CLSTN1-204ENST00000464286 CHCHD10Q8WYQ3 142 aaPredicted RBP4.93□□□□□ -1.62
CLSTN1-204ENST00000464286 IGF2RP11717 2491 aa4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 F8WDY8 70 aa4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 F8WEM9 126 aa4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 OXTP01178 125 aa4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 IGLV1-51P01701 117 aa4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 PLA2G2AP14555 144 aa4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 KIAA0087Q14695 138 aa4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 NREPQ16612 68 aa4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 CSNK1G2-AS1Q8NCQ2 148 aa4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 HRNRQ86YZ3 2850 aaPredicted RBP4.92□□□□□ -1.62
CLSTN1-204ENST00000464286 TACC2O95359 2948 aa4.91□□□□□ -1.62
CLSTN1-204ENST00000464286 TRBV7-4A0A0J9YYF1 115 aa4.91□□□□□ -1.62
CLSTN1-204ENST00000464286 RPL35AP18077 110 aaKnown RBP4.91□□□□□ -1.62
CLSTN1-204ENST00000464286 REG3AQ06141 175 aa4.91□□□□□ -1.62
CLSTN1-204ENST00000464286 SPAG11BQ08648 103 aa4.91□□□□□ -1.62
CLSTN1-204ENST00000464286 Q6ZQY7 126 aa4.91□□□□□ -1.62
CLSTN1-204ENST00000464286 AKAP6Q13023 2319 aa4.9□□□□□ -1.62
CLSTN1-204ENST00000464286 CREBBPQ92793 2442 aa4.9□□□□□ -1.62
CLSTN1-204ENST00000464286 BPY2O14599 106 aa4.9□□□□□ -1.63
CLSTN1-204ENST00000464286 ANGP03950 147 aaKnown RBP4.9□□□□□ -1.63
CLSTN1-204ENST00000464286 GIG44P09565 113 aaPredicted RBP4.9□□□□□ -1.63
CLSTN1-204ENST00000464286 LINC00269Q8N2A0 174 aa4.9□□□□□ -1.63
CLSTN1-204ENST00000464286 WFDC9Q8NEX5 89 aa4.9□□□□□ -1.63
CLSTN1-204ENST00000464286 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.63
CLSTN1-204ENST00000464286 BBC3Q96PG8 261 aaPredicted RBP4.9□□□□□ -1.63
CLSTN1-204ENST00000464286 C16orf95Q9H693 158 aa4.9□□□□□ -1.63
CLSTN1-204ENST00000464286 AKAP13Q12802 2813 aa4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 POLQO75417 2590 aa4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 DEFB130BP0DP73 79 aa4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 DEFB130AP0DP74 79 aa4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 SPATA3Q8NHX4 192 aa4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 C1orf43Q9BWL3 253 aa4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 UBR5O95071 2799 aaPredicted RBP4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 FBN2P35556 2912 aa4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 IGSF10Q6WRI0 2623 aa4.89□□□□□ -1.63
CLSTN1-204ENST00000464286 MGAQ8IWI9 3026 aa4.88□□□□□ -1.63
CLSTN1-204ENST00000464286 M0R378 163 aa4.88□□□□□ -1.63
CLSTN1-204ENST00000464286 PRYO14603 147 aa4.88□□□□□ -1.63
CLSTN1-204ENST00000464286 FUSP35637 526 aaKnown RBP eCLIP4.88□□□□□ -1.63
CLSTN1-204ENST00000464286 ELOF1P60002 83 aaKnown RBP4.88□□□□□ -1.63
CLSTN1-204ENST00000464286 DEFB113Q30KQ7 82 aa4.88□□□□□ -1.63
CLSTN1-204ENST00000464286 HIGD2BQ4VC39 106 aa4.88□□□□□ -1.63
CLSTN1-204ENST00000464286 DMXL2Q8TDJ6 3036 aa4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 ADGRG4Q8IZF6 3080 aa4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 TRAV10A0A0B4J240 114 aa4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 DNAJC9-AS1A6NH13 148 aa4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 APOC4P55056 127 aa4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 PRR3P79522 188 aaKnown RBP4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 LELP1Q5T871 98 aa4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 ZNF843Q8N446 348 aa4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 RMI2Q96E14 147 aa4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
CLSTN1-204ENST00000464286 LRBAP50851 2863 aa4.86□□□□□ -1.63
CLSTN1-204ENST00000464286 NOTCH2Q04721 2471 aa4.86□□□□□ -1.63
CLSTN1-204ENST00000464286 CEP295Q9C0D2 2601 aa4.86□□□□□ -1.63
CLSTN1-204ENST00000464286 PRB1P04280 392 aa4.86□□□□□ -1.63
CLSTN1-204ENST00000464286 EGFEM1PQ0D2K5 195 aa4.86□□□□□ -1.63
CLSTN1-204ENST00000464286 ESRGQ1W209 222 aa4.86□□□□□ -1.63
CLSTN1-204ENST00000464286 LINC00336Q6ZUF6 198 aa4.86□□□□□ -1.63
CLSTN1-204ENST00000464286 V9GYY9 64 aa4.86□□□□□ -1.63
CLSTN1-204ENST00000464286 NBPF19A0A087WUL8 3843 aa4.86□□□□□ -1.63
CLSTN1-204ENST00000464286 CSPG4Q6UVK1 2322 aa4.85□□□□□ -1.63
CLSTN1-204ENST00000464286 NBASA2RRP1 2371 aa4.85□□□□□ -1.63
CLSTN1-204ENST00000464286 NDUFB1O75438 58 aa4.85□□□□□ -1.63
CLSTN1-204ENST00000464286 CLPSL2Q6UWE3 100 aa4.85□□□□□ -1.63
CLSTN1-204ENST00000464286 BOD1L1Q8NFC6 3051 aa4.85□□□□□ -1.63
CLSTN1-204ENST00000464286 DNHD1Q96M86 4753 aa4.85□□□□□ -1.63
CLSTN1-204ENST00000464286 A0A0U1RQV1 116 aa4.84□□□□□ -1.63
CLSTN1-204ENST00000464286 DAD1P61803 113 aa4.84□□□□□ -1.63
CLSTN1-204ENST00000464286 UNQ6190/PRO20217Q6UXQ8 127 aa4.84□□□□□ -1.63
CLSTN1-204ENST00000464286 LINC01006Q8NI28 216 aa4.84□□□□□ -1.63
CLSTN1-204ENST00000464286 TM2D3Q9BRN9 247 aa4.84□□□□□ -1.63
CLSTN1-204ENST00000464286 ESM1Q9NQ30 184 aa4.84□□□□□ -1.63
CLSTN1-204ENST00000464286 PRR34Q9NV39 138 aa4.84□□□□□ -1.63
CLSTN1-204ENST00000464286 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
CLSTN1-204ENST00000464286 FP248Q71RG6 208 aaPredicted RBP4.83□□□□□ -1.64
CLSTN1-204ENST00000464286 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
CLSTN1-204ENST00000464286 DHRS4-AS1Q9P1J3 65 aa4.83□□□□□ -1.64
CLSTN1-204ENST00000464286 CELA1Q9UNI1 258 aa4.83□□□□□ -1.64
CLSTN1-204ENST00000464286 CR1P17927 2039 aa4.83□□□□□ -1.64
CLSTN1-204ENST00000464286 LAMA5O15230 3695 aa4.83□□□□□ -1.64
CLSTN1-204ENST00000464286 DCHS2Q6V1P9 2916 aa4.82□□□□□ -1.64
CLSTN1-204ENST00000464286 IGLV10-54A0A075B6I4 117 aa4.82□□□□□ -1.64
CLSTN1-204ENST00000464286 SPART-AS1P0CW21 52 aa4.82□□□□□ -1.64
CLSTN1-204ENST00000464286 C9orf116Q5BN46 136 aaPredicted RBP4.82□□□□□ -1.64
CLSTN1-204ENST00000464286 MAPK1IP1LQ8NDC0 245 aa4.82□□□□□ -1.64
CLSTN1-204ENST00000464286 CAMK2N2Q96S95 79 aa4.82□□□□□ -1.64
CLSTN1-204ENST00000464286 OCR1Q9BZK8 76 aa4.82□□□□□ -1.64
CLSTN1-204ENST00000464286 ZFHX3Q15911 3703 aa4.82□□□□□ -1.64
CLSTN1-204ENST00000464286 ITPR1Q14643 2758 aa4.82□□□□□ -1.64
CLSTN1-204ENST00000464286 SPG11Q96JI7 2443 aa4.81□□□□□ -1.64
CLSTN1-204ENST00000464286 IGKV4-1P06312 121 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms