RNA–Protein interactions for RNA: ENST00000463727.1

PTPRE-205, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best)

Gene PTPRE, Length 3,944 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-205ENST00000463727 Q8N3U1 123 aa7.18□□□□□ -1.26
PTPRE-205ENST00000463727 C20orf197Q8N268 126 aa7.17□□□□□ -1.26
PTPRE-205ENST00000463727 APCP25054 2843 aa7.17□□□□□ -1.26
PTPRE-205ENST00000463727 LINC00575Q6W349 94 aa7.17□□□□□ -1.26
PTPRE-205ENST00000463727 DEFB105AQ8NG35 78 aa7.17□□□□□ -1.26
PTPRE-205ENST00000463727 IGHV4-30-4P0DP06 118 aa7.16□□□□□ -1.26
PTPRE-205ENST00000463727 TENM4Q6N022 2769 aa7.16□□□□□ -1.26
PTPRE-205ENST00000463727 NBPF19A0A087WUL8 3843 aa7.16□□□□□ -1.26
PTPRE-205ENST00000463727 MXRA5Q9NR99 2828 aa7.16□□□□□ -1.26
PTPRE-205ENST00000463727 TRBV10-3A0A0K0K1G6 114 aa7.16□□□□□ -1.26
PTPRE-205ENST00000463727 ZNF73O43830 326 aaPredicted RBP7.15□□□□□ -1.26
PTPRE-205ENST00000463727 C9orf129Q5T035 196 aaKnown RBP7.15□□□□□ -1.26
PTPRE-205ENST00000463727 CELA1Q9UNI1 258 aa7.15□□□□□ -1.26
PTPRE-205ENST00000463727 C10orf25Q5T742 122 aa7.15□□□□□ -1.27
PTPRE-205ENST00000463727 KPRPQ5T749 579 aaPredicted RBP7.15□□□□□ -1.27
PTPRE-205ENST00000463727 TMEM258P61165 79 aa7.14□□□□□ -1.27
PTPRE-205ENST00000463727 FAM19A1Q7Z5A9 133 aa7.14□□□□□ -1.27
PTPRE-205ENST00000463727 LINC00612Q8N6U2 182 aa7.14□□□□□ -1.27
PTPRE-205ENST00000463727 NREPQ16612 68 aa7.13□□□□□ -1.27
PTPRE-205ENST00000463727 KIAA0087Q14695 138 aa7.13□□□□□ -1.27
PTPRE-205ENST00000463727 SCXQ7RTU7 201 aa7.13□□□□□ -1.27
PTPRE-205ENST00000463727 GCN1Q92616 2671 aaKnown RBP7.13□□□□□ -1.27
PTPRE-205ENST00000463727 C5orf47Q569G3 176 aa7.12□□□□□ -1.27
PTPRE-205ENST00000463727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.12□□□□□ -1.27
PTPRE-205ENST00000463727 M0R378 163 aa7.12□□□□□ -1.27
PTPRE-205ENST00000463727 CRYGAP11844 174 aa7.12□□□□□ -1.27
PTPRE-205ENST00000463727 ZNF469Q96JG9 3925 aaPredicted RBP7.11□□□□□ -1.27
PTPRE-205ENST00000463727 LYPD5Q6UWN5 251 aa7.11□□□□□ -1.27
PTPRE-205ENST00000463727 NBEAL2Q6ZNJ1 2754 aa7.11□□□□□ -1.27
PTPRE-205ENST00000463727 ETDCA0A1B0GVM5 59 aa7.1□□□□□ -1.27
PTPRE-205ENST00000463727 KRTAP1-1Q07627 177 aa7.1□□□□□ -1.27
PTPRE-205ENST00000463727 EGFEM1PQ0D2K5 195 aa7.1□□□□□ -1.27
PTPRE-205ENST00000463727 SETXQ7Z333 2677 aaKnown RBP7.1□□□□□ -1.27
PTPRE-205ENST00000463727 FUSP35637 526 aaKnown RBP eCLIP7.1□□□□□ -1.27
PTPRE-205ENST00000463727 SYCNQ0VAF6 134 aa7.1□□□□□ -1.27
PTPRE-205ENST00000463727 DEFB131BA0A096LNP1 70 aa7.09□□□□□ -1.27
PTPRE-205ENST00000463727 F8P00451 2351 aa7.09□□□□□ -1.27
PTPRE-205ENST00000463727 A0A0J9YWU9 116 aa7.09□□□□□ -1.27
PTPRE-205ENST00000463727 WFDC10BQ8IUB3 73 aa7.09□□□□□ -1.27
PTPRE-205ENST00000463727 MAST4O15021 2626 aa7.09□□□□□ -1.27
PTPRE-205ENST00000463727 OXLD1Q5BKU9 147 aa7.09□□□□□ -1.27
PTPRE-205ENST00000463727 Q8NAQ8 132 aa7.09□□□□□ -1.27
PTPRE-205ENST00000463727 C11orf45Q8TAV5 145 aa7.08□□□□□ -1.28
PTPRE-205ENST00000463727 NF1P21359 2839 aa7.08□□□□□ -1.28
PTPRE-205ENST00000463727 LOC107984640A0A0U1RRK4 108 aa7.08□□□□□ -1.28
PTPRE-205ENST00000463727 F8WEM9 126 aa7.08□□□□□ -1.28
PTPRE-205ENST00000463727 Q6ZVQ6 151 aa7.08□□□□□ -1.28
PTPRE-205ENST00000463727 C6orf48Q9UBA6 75 aa7.08□□□□□ -1.28
PTPRE-205ENST00000463727 KRTAP10-3P60369 221 aa7.08□□□□□ -1.28
PTPRE-205ENST00000463727 RMI2Q96E14 147 aa7.08□□□□□ -1.28
PTPRE-205ENST00000463727 RETNQ9HD89 108 aa7.08□□□□□ -1.28
PTPRE-205ENST00000463727 Q6ZTC4 211 aa7.07□□□□□ -1.28
PTPRE-205ENST00000463727 OBSCN-AS1Q96MR7 158 aa7.07□□□□□ -1.28
PTPRE-205ENST00000463727 C22orf24Q9Y442 160 aa7.07□□□□□ -1.28
PTPRE-205ENST00000463727 ATRQ13535 2644 aa7.07□□□□□ -1.28
PTPRE-205ENST00000463727 ITPR2Q14571 2701 aa7.07□□□□□ -1.28
PTPRE-205ENST00000463727 KMT2BQ9UMN6 2715 aaPredicted RBP7.07□□□□□ -1.28
PTPRE-205ENST00000463727 LINC01547P58512 204 aaPredicted RBP7.07□□□□□ -1.28
PTPRE-205ENST00000463727 UBE2BP63146 152 aa7.07□□□□□ -1.28
PTPRE-205ENST00000463727 FAM236DA0A1B0GTK5 79 aa7.06□□□□□ -1.28
PTPRE-205ENST00000463727 NDUFC2-KCTD14E9PQ53 114 aa7.06□□□□□ -1.28
PTPRE-205ENST00000463727 BPY2O14599 106 aa7.06□□□□□ -1.28
PTPRE-205ENST00000463727 FAM236CP0DP71 79 aa7.06□□□□□ -1.28
PTPRE-205ENST00000463727 Q6ZQT0 140 aa7.06□□□□□ -1.28
PTPRE-205ENST00000463727 NANOS2P60321 138 aaKnown RBP7.06□□□□□ -1.28
PTPRE-205ENST00000463727 Q6ZRU5 148 aa7.06□□□□□ -1.28
PTPRE-205ENST00000463727 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
PTPRE-205ENST00000463727 DPH3Q96FX2 82 aa7.05□□□□□ -1.28
PTPRE-205ENST00000463727 WIPF1O43516 503 aa7.05□□□□□ -1.28
PTPRE-205ENST00000463727 PSCAO43653 123 aa7.05□□□□□ -1.28
PTPRE-205ENST00000463727 IGLV6-57P01721 117 aa7.05□□□□□ -1.28
PTPRE-205ENST00000463727 SNURFQ9Y675 71 aa7.05□□□□□ -1.28
PTPRE-205ENST00000463727 C3orf84H3BNL1 204 aa7.04□□□□□ -1.28
PTPRE-205ENST00000463727 FAM19A5Q7Z5A7 132 aaPredicted RBP7.04□□□□□ -1.28
PTPRE-205ENST00000463727 SPATA3Q8NHX4 192 aa7.04□□□□□ -1.28
PTPRE-205ENST00000463727 LINC00167Q96N53 147 aa7.04□□□□□ -1.28
PTPRE-205ENST00000463727 LOC110117498A0A087WWA1 95 aa7.03□□□□□ -1.28
PTPRE-205ENST00000463727 MRAPQ8TCY5 172 aa7.03□□□□□ -1.28
PTPRE-205ENST00000463727 C2orf48Q96LS8 159 aa7.03□□□□□ -1.28
PTPRE-205ENST00000463727 PRR34Q9NV39 138 aa7.03□□□□□ -1.28
PTPRE-205ENST00000463727 GVQW2A0A096LPI5 108 aaPredicted RBP7.03□□□□□ -1.28
PTPRE-205ENST00000463727 PDZD2O15018 2839 aa7.03□□□□□ -1.28
PTPRE-205ENST00000463727 UNC79Q9P2D8 2635 aa7.02□□□□□ -1.29
PTPRE-205ENST00000463727 CXCL6P80162 114 aa7.01□□□□□ -1.29
PTPRE-205ENST00000463727 UBE2DNLQ8IWF7 75 aa7.01□□□□□ -1.29
PTPRE-205ENST00000463727 RPL37AP8A6NKH3 93 aa7.01□□□□□ -1.29
PTPRE-205ENST00000463727 ELOF1P60002 83 aaKnown RBP7□□□□□ -1.29
PTPRE-205ENST00000463727 RPS28P62857 69 aaKnown RBP7□□□□□ -1.29
PTPRE-205ENST00000463727 ESRGQ1W209 222 aa6.99□□□□□ -1.29
PTPRE-205ENST00000463727 CUBNO60494 3623 aa6.99□□□□□ -1.29
PTPRE-205ENST00000463727 DHRS4-AS1Q9P1J3 65 aa6.99□□□□□ -1.29
PTPRE-205ENST00000463727 TEP1Q99973 2627 aaKnown RBP6.99□□□□□ -1.29
PTPRE-205ENST00000463727 TRBV7-6A0A0J9YX20 115 aa6.98□□□□□ -1.29
PTPRE-205ENST00000463727 H3BNG1 76 aa6.98□□□□□ -1.29
PTPRE-205ENST00000463727 VPREB1P12018 145 aa6.98□□□□□ -1.29
PTPRE-205ENST00000463727 F8WDY8 70 aa6.98□□□□□ -1.29
PTPRE-205ENST00000463727 NDUFC1O43677 76 aa6.98□□□□□ -1.29
PTPRE-205ENST00000463727 AKAP9Q99996 3911 aa6.97□□□□□ -1.29
PTPRE-205ENST00000463727 BCE1O60756 84 aa6.97□□□□□ -1.29
PTPRE-205ENST00000463727 Q8NDZ9 215 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms