RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 COX6B1P14854 86 aa2.43□□□□□ -2.02
U2AF1-205ENST00000463599 ZNF137PP52743 207 aa2.43□□□□□ -2.02
U2AF1-205ENST00000463599 FXYD3Q14802 87 aa2.43□□□□□ -2.02
U2AF1-205ENST00000463599 MED12Q93074 2177 aa2.43□□□□□ -2.02
U2AF1-205ENST00000463599 C4AP0C0L4 1744 aa2.42□□□□□ -2.02
U2AF1-205ENST00000463599 ZFHX2Q9C0A1 2572 aaPredicted RBP2.42□□□□□ -2.02
U2AF1-205ENST00000463599 TRBV6-4A0A1B0GX49 114 aa2.42□□□□□ -2.02
U2AF1-205ENST00000463599 IGIPA6NJ69 53 aa2.42□□□□□ -2.02
U2AF1-205ENST00000463599 NDUFA3O95167 84 aa2.42□□□□□ -2.02
U2AF1-205ENST00000463599 IL9P15248 144 aa2.42□□□□□ -2.02
U2AF1-205ENST00000463599 DEFB112Q30KQ8 113 aa2.42□□□□□ -2.02
U2AF1-205ENST00000463599 SPATA8Q6RVD6 105 aa2.42□□□□□ -2.02
U2AF1-205ENST00000463599 TET1Q8NFU7 2136 aa2.42□□□□□ -2.02
U2AF1-205ENST00000463599 CUL9Q8IWT3 2517 aa2.41□□□□□ -2.02
U2AF1-205ENST00000463599 IGKV3OR2-268A0A0C4DH90 116 aa2.41□□□□□ -2.02
U2AF1-205ENST00000463599 DEFB114Q30KQ6 69 aa2.41□□□□□ -2.02
U2AF1-205ENST00000463599 SPRR4Q96PI1 79 aa2.41□□□□□ -2.02
U2AF1-205ENST00000463599 INTS1Q8N201 2190 aaKnown RBP2.41□□□□□ -2.02
U2AF1-205ENST00000463599 SPAG17Q6Q759 2223 aa2.4□□□□□ -2.03
U2AF1-205ENST00000463599 IGKV2-40A0A087WW87 121 aaPredicted RBP2.4□□□□□ -2.03
U2AF1-205ENST00000463599 IGKV2D-40P01614 121 aaPredicted RBP2.4□□□□□ -2.03
U2AF1-205ENST00000463599 IGLV3-1P01715 115 aa2.4□□□□□ -2.03
U2AF1-205ENST00000463599 LINC00322Q6ZN03 302 aaPredicted RBP2.4□□□□□ -2.03
U2AF1-205ENST00000463599 ZNF831Q5JPB2 1677 aa2.4□□□□□ -2.03
U2AF1-205ENST00000463599 ARFGEF3Q5TH69 2177 aa2.4□□□□□ -2.03
U2AF1-205ENST00000463599 DNAJC13O75165 2243 aa2.4□□□□□ -2.03
U2AF1-205ENST00000463599 NDUFA4O00483 81 aa2.39□□□□□ -2.03
U2AF1-205ENST00000463599 PIN1P1O15428 100 aa2.39□□□□□ -2.03
U2AF1-205ENST00000463599 SPINK7P58062 85 aa2.39□□□□□ -2.03
U2AF1-205ENST00000463599 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
U2AF1-205ENST00000463599 HAMPP81172 84 aa2.39□□□□□ -2.03
U2AF1-205ENST00000463599 C4BP0C0L5 1744 aa2.38□□□□□ -2.03
U2AF1-205ENST00000463599 RPL38P63173 70 aaKnown RBP2.38□□□□□ -2.03
U2AF1-205ENST00000463599 PLXNB2O15031 1838 aa2.38□□□□□ -2.03
U2AF1-205ENST00000463599 PRRC2BQ5JSZ5 2229 aaKnown RBP2.37□□□□□ -2.03
U2AF1-205ENST00000463599 LOC110117498A0A087WWA1 95 aa2.37□□□□□ -2.03
U2AF1-205ENST00000463599 RPL37AP61513 92 aaKnown RBP2.37□□□□□ -2.03
U2AF1-205ENST00000463599 C10orf55Q5SWW7 151 aa2.37□□□□□ -2.03
U2AF1-205ENST00000463599 DEFB132Q7Z7B7 95 aa2.37□□□□□ -2.03
U2AF1-205ENST00000463599 ETDCA0A1B0GVM5 59 aa2.36□□□□□ -2.03
U2AF1-205ENST00000463599 TRGV1A0A0A0MS02 117 aa2.35□□□□□ -2.03
U2AF1-205ENST00000463599 A0A1B0GU69 56 aa2.35□□□□□ -2.03
U2AF1-205ENST00000463599 MRPL33O75394 65 aaKnown RBP2.35□□□□□ -2.03
U2AF1-205ENST00000463599 IGKV2-29A2NJV5 120 aaPredicted RBP2.34□□□□□ -2.03
U2AF1-205ENST00000463599 KCNQ1DNQ9H478 68 aa2.34□□□□□ -2.03
U2AF1-205ENST00000463599 RP1P56715 2156 aa2.34□□□□□ -2.04
U2AF1-205ENST00000463599 DOCK10Q96BY6 2186 aa2.34□□□□□ -2.04
U2AF1-205ENST00000463599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.33□□□□□ -2.04
U2AF1-205ENST00000463599 A0A087WTM6 91 aa2.33□□□□□ -2.04
U2AF1-205ENST00000463599 NBDYA0A0U1RRE5 68 aa2.33□□□□□ -2.04
U2AF1-205ENST00000463599 ACYP2P14621 99 aa2.33□□□□□ -2.04
U2AF1-205ENST00000463599 COX7BP24311 80 aa2.33□□□□□ -2.04
U2AF1-205ENST00000463599 COL4A5P29400 1685 aa2.33□□□□□ -2.04
U2AF1-205ENST00000463599 CEP192Q8TEP8 1941 aa2.32□□□□□ -2.04
U2AF1-205ENST00000463599 NCR3O14931 201 aa2.32□□□□□ -2.04
U2AF1-205ENST00000463599 C5orf56Q8N8D9 126 aa2.32□□□□□ -2.04
U2AF1-205ENST00000463599 FN1P02751 2386 aaKnown RBP2.31□□□□□ -2.04
U2AF1-205ENST00000463599 FXYD4P59646 89 aa2.31□□□□□ -2.04
U2AF1-205ENST00000463599 LINC00959A0A1B0GUT2 108 aa2.3□□□□□ -2.04
U2AF1-205ENST00000463599 DEFB119Q8N690 84 aa2.3□□□□□ -2.04
U2AF1-205ENST00000463599 Q96NJ1 140 aa2.3□□□□□ -2.04
U2AF1-205ENST00000463599 SMIM2Q9BVW6 85 aa2.3□□□□□ -2.04
U2AF1-205ENST00000463599 ABCA4P78363 2273 aa2.29□□□□□ -2.04
U2AF1-205ENST00000463599 UNC13CQ8NB66 2214 aa2.29□□□□□ -2.04
U2AF1-205ENST00000463599 CPSF4LA6NMK7 179 aaKnown RBP2.29□□□□□ -2.04
U2AF1-205ENST00000463599 LINC00472Q9H8W2 130 aa2.29□□□□□ -2.04
U2AF1-205ENST00000463599 TNCP24821 2201 aa2.28□□□□□ -2.04
U2AF1-205ENST00000463599 IAPPP10997 89 aa2.28□□□□□ -2.04
U2AF1-205ENST00000463599 TFF3Q07654 80 aa2.28□□□□□ -2.04
U2AF1-205ENST00000463599 UNQ6190/PRO20217Q6UXQ8 127 aa2.28□□□□□ -2.04
U2AF1-205ENST00000463599 Q6ZQY7 126 aa2.28□□□□□ -2.04
U2AF1-205ENST00000463599 BRWD1Q9NSI6 2320 aa2.27□□□□□ -2.05
U2AF1-205ENST00000463599 INE1O15225 51 aa2.27□□□□□ -2.05
U2AF1-205ENST00000463599 ARHGAP5-AS1Q96IT6 56 aa2.27□□□□□ -2.05
U2AF1-205ENST00000463599 SDK1Q7Z5N4 2213 aa2.27□□□□□ -2.05
U2AF1-205ENST00000463599 FREM1Q5H8C1 2179 aa2.27□□□□□ -2.05
U2AF1-205ENST00000463599 ZFHX3Q15911 3703 aa2.27□□□□□ -2.05
U2AF1-205ENST00000463599 GOLGA4Q13439 2230 aaKnown RBP2.26□□□□□ -2.05
U2AF1-205ENST00000463599 DEFB131BA0A096LNP1 70 aa2.26□□□□□ -2.05
U2AF1-205ENST00000463599 CNFNQ9BYD5 112 aa2.26□□□□□ -2.05
U2AF1-205ENST00000463599 ALPK2Q86TB3 2170 aa2.26□□□□□ -2.05
U2AF1-205ENST00000463599 KMT2BQ9UMN6 2715 aaPredicted RBP2.25□□□□□ -2.05
U2AF1-205ENST00000463599 M0R2N4 97 aa2.25□□□□□ -2.05
U2AF1-205ENST00000463599 RPS27LQ71UM5 84 aaKnown RBP2.25□□□□□ -2.05
U2AF1-205ENST00000463599 LINC00308Q8TCZ7 52 aa2.25□□□□□ -2.05
U2AF1-205ENST00000463599 SPTY2D1-AS1A0A0U1RR47 76 aa2.24□□□□□ -2.05
U2AF1-205ENST00000463599 NDUFA1O15239 70 aa2.24□□□□□ -2.05
U2AF1-205ENST00000463599 SSBP3-AS1Q7Z2R9 100 aa2.24□□□□□ -2.05
U2AF1-205ENST00000463599 FBN1P35555 2871 aaKnown RBP2.24□□□□□ -2.05
U2AF1-205ENST00000463599 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
U2AF1-205ENST00000463599 LINC00158P58513 81 aa2.23□□□□□ -2.05
U2AF1-205ENST00000463599 KRTAP21-3Q3LHN1 58 aa2.23□□□□□ -2.05
U2AF1-205ENST00000463599 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.23□□□□□ -2.05
U2AF1-205ENST00000463599 CCL19Q99731 98 aa2.23□□□□□ -2.05
U2AF1-205ENST00000463599 SMIM11BQ8TCY0 68 aa2.22□□□□□ -2.05
U2AF1-205ENST00000463599 TNRC6CQ9HCJ0 1690 aaKnown RBP2.22□□□□□ -2.05
U2AF1-205ENST00000463599 LY6G6CO95867 125 aa2.21□□□□□ -2.06
U2AF1-205ENST00000463599 PRB1P04280 392 aa2.21□□□□□ -2.06
U2AF1-205ENST00000463599 RTTNQ86VV8 2226 aa2.21□□□□□ -2.06
U2AF1-205ENST00000463599 Q6ZRX8 168 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms