RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 VAMP3Q15836 100 aa12.38□□□□□ -0.43
CCDC78-206ENST00000463539 KMT2AQ03164 3969 aa12.37□□□□□ -0.43
CCDC78-206ENST00000463539 TRAV13-2A0A0B4J235 113 aa12.37□□□□□ -0.43
CCDC78-206ENST00000463539 NDUFC2O95298 119 aa12.37□□□□□ -0.43
CCDC78-206ENST00000463539 FABP2P12104 132 aa12.37□□□□□ -0.43
CCDC78-206ENST00000463539 CNBPP62633 177 aaKnown RBP12.37□□□□□ -0.43
CCDC78-206ENST00000463539 GAGE2EQ4V326 116 aa12.37□□□□□ -0.43
CCDC78-206ENST00000463539 Q6ZRP5 223 aa12.37□□□□□ -0.43
CCDC78-206ENST00000463539 GAGE2DQ9UEU5 116 aa12.37□□□□□ -0.43
CCDC78-206ENST00000463539 TLX1NBP0CAT3 122 aa12.36□□□□□ -0.43
CCDC78-206ENST00000463539 LINC00337Q8N6G1 96 aa12.36□□□□□ -0.43
CCDC78-206ENST00000463539 RPL18AQ02543 176 aaKnown RBP12.35□□□□□ -0.43
CCDC78-206ENST00000463539 C1orf134Q5TEV5 83 aa12.35□□□□□ -0.43
CCDC78-206ENST00000463539 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.34□□□□□ -0.43
CCDC78-206ENST00000463539 PSMB2P49721 201 aa12.33□□□□□ -0.44
CCDC78-206ENST00000463539 Q8NDZ9 215 aa12.33□□□□□ -0.44
CCDC78-206ENST00000463539 PRR3P79522 188 aaKnown RBP12.32□□□□□ -0.44
CCDC78-206ENST00000463539 DNAH2Q9P225 4427 aa12.31□□□□□ -0.44
CCDC78-206ENST00000463539 SPCS1Q9Y6A9 102 aa12.31□□□□□ -0.44
CCDC78-206ENST00000463539 LOC107984640A0A0U1RRK4 108 aa12.3□□□□□ -0.44
CCDC78-206ENST00000463539 NCR3O14931 201 aa12.3□□□□□ -0.44
CCDC78-206ENST00000463539 LYRM7Q5U5X0 104 aa12.3□□□□□ -0.44
CCDC78-206ENST00000463539 Q8N814 137 aa12.3□□□□□ -0.44
CCDC78-206ENST00000463539 OR13C6PQ8NH95 151 aa12.3□□□□□ -0.44
CCDC78-206ENST00000463539 DNAH6Q9C0G6 4158 aa12.3□□□□□ -0.44
CCDC78-206ENST00000463539 A0A087WTM6 91 aa12.3□□□□□ -0.44
CCDC78-206ENST00000463539 C9orf129Q5T035 196 aaKnown RBP12.29□□□□□ -0.44
CCDC78-206ENST00000463539 GAGE10A6NGK3 116 aa12.28□□□□□ -0.44
CCDC78-206ENST00000463539 K7EP34 96 aa12.28□□□□□ -0.44
CCDC78-206ENST00000463539 TRIAP1O43715 76 aa12.28□□□□□ -0.44
CCDC78-206ENST00000463539 SCGB1C2P0DMR2 95 aa12.28□□□□□ -0.44
CCDC78-206ENST00000463539 GAGE2BQ13066 116 aa12.27□□□□□ -0.44
CCDC78-206ENST00000463539 GTF2H5Q6ZYL4 71 aa12.27□□□□□ -0.44
CCDC78-206ENST00000463539 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
CCDC78-206ENST00000463539 VPREB1P12018 145 aa12.26□□□□□ -0.45
CCDC78-206ENST00000463539 COX6CP09669 75 aa12.25□□□□□ -0.45
CCDC78-206ENST00000463539 UBE2V1Q13404 147 aa12.25□□□□□ -0.45
CCDC78-206ENST00000463539 S100A7L2Q5SY68 101 aa12.25□□□□□ -0.45
CCDC78-206ENST00000463539 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
CCDC78-206ENST00000463539 C9orf163Q8N9P6 203 aa12.23□□□□□ -0.45
CCDC78-206ENST00000463539 SMIM11BQ8TCY0 68 aa12.23□□□□□ -0.45
CCDC78-206ENST00000463539 RPL28P46779 137 aaKnown RBP12.23□□□□□ -0.45
CCDC78-206ENST00000463539 PKIGQ9Y2B9 76 aa12.22□□□□□ -0.45
CCDC78-206ENST00000463539 TRBV20-1A0A075B6N2 111 aa12.21□□□□□ -0.45
CCDC78-206ENST00000463539 C16orf90A8MZG2 172 aa12.21□□□□□ -0.45
CCDC78-206ENST00000463539 A0A096LNI7 61 aa12.21□□□□□ -0.46
CCDC78-206ENST00000463539 IGLV6-57P01721 117 aa12.21□□□□□ -0.46
CCDC78-206ENST00000463539 SERTAD4-AS1Q5TG53 156 aa12.21□□□□□ -0.46
CCDC78-206ENST00000463539 PLA2G2DQ9UNK4 145 aa12.21□□□□□ -0.46
CCDC78-206ENST00000463539 M0R378 163 aa12.2□□□□□ -0.46
CCDC78-206ENST00000463539 TCL1BO95988 128 aa12.2□□□□□ -0.46
CCDC78-206ENST00000463539 NKAPP1Q8N9T2 125 aa12.2□□□□□ -0.46
CCDC78-206ENST00000463539 IGKV2-24A0A0C4DH68 120 aa12.19□□□□□ -0.46
CCDC78-206ENST00000463539 FAM168BA1KXE4 195 aa12.18□□□□□ -0.46
CCDC78-206ENST00000463539 H3BMG7 143 aa12.18□□□□□ -0.46
CCDC78-206ENST00000463539 TRBV10-3A0A0K0K1G6 114 aa12.18□□□□□ -0.46
CCDC78-206ENST00000463539 LINC01620Q4KN68 170 aa12.18□□□□□ -0.46
CCDC78-206ENST00000463539 RTL8CO15255 209 aa12.17□□□□□ -0.46
CCDC78-206ENST00000463539 TNP2Q05952 138 aa12.17□□□□□ -0.46
CCDC78-206ENST00000463539 DNAH17Q9UFH2 4485 aa12.16□□□□□ -0.46
CCDC78-206ENST00000463539 LCE6AA0A183 80 aa12.16□□□□□ -0.46
CCDC78-206ENST00000463539 IGLV5-37A0A075B6J1 123 aa12.16□□□□□ -0.46
CCDC78-206ENST00000463539 ATXN8Q156A1 80 aa12.16□□□□□ -0.46
CCDC78-206ENST00000463539 FAM19A5Q7Z5A7 132 aaPredicted RBP12.16□□□□□ -0.46
CCDC78-206ENST00000463539 CLEC2BQ92478 149 aa12.16□□□□□ -0.46
CCDC78-206ENST00000463539 SDIM1Q6ZPB5 146 aa12.15□□□□□ -0.46
CCDC78-206ENST00000463539 HYDINQ4G0P3 5121 aa12.14□□□□□ -0.47
CCDC78-206ENST00000463539 TRAV23DV6A0A075B6W5 121 aa12.14□□□□□ -0.47
CCDC78-206ENST00000463539 C7orf33Q8WU49 177 aa12.14□□□□□ -0.47
CCDC78-206ENST00000463539 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
CCDC78-206ENST00000463539 CHTF8P0CG12 524 aa12.13□□□□□ -0.47
CCDC78-206ENST00000463539 KRTAP7-1Q8IUC3 87 aa12.13□□□□□ -0.47
CCDC78-206ENST00000463539 IGLV5-52A0A0A0MRZ9 124 aa12.12□□□□□ -0.47
CCDC78-206ENST00000463539 LST1O00453 97 aa12.12□□□□□ -0.47
CCDC78-206ENST00000463539 FUSP35637 526 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC78-206ENST00000463539 LINC00474Q9P2X8 69 aa12.12□□□□□ -0.47
CCDC78-206ENST00000463539 H0YGX0 51 aa12.11□□□□□ -0.47
CCDC78-206ENST00000463539 C6orf99Q4VX62 202 aa12.11□□□□□ -0.47
CCDC78-206ENST00000463539 C22orf24Q9Y442 160 aa12.11□□□□□ -0.47
CCDC78-206ENST00000463539 SACSQ9NZJ4 4579 aa12.11□□□□□ -0.47
CCDC78-206ENST00000463539 MRPL55Q7Z7F7 128 aaKnown RBP12.1□□□□□ -0.47
CCDC78-206ENST00000463539 HECTD4Q9Y4D8 3996 aa12.09□□□□□ -0.47
CCDC78-206ENST00000463539 FRAS1Q86XX4 4008 aa12.09□□□□□ -0.47
CCDC78-206ENST00000463539 A0A1W2PNN7 141 aa12.09□□□□□ -0.47
CCDC78-206ENST00000463539 ZNF73O43830 326 aaPredicted RBP12.09□□□□□ -0.47
CCDC78-206ENST00000463539 FAM218AQ96MZ4 157 aa12.09□□□□□ -0.47
CCDC78-206ENST00000463539 M0QXV9 152 aa12.08□□□□□ -0.48
CCDC78-206ENST00000463539 MTURNQ8N3F0 131 aa12.08□□□□□ -0.48
CCDC78-206ENST00000463539 DIRC1Q969H9 104 aa12.08□□□□□ -0.48
CCDC78-206ENST00000463539 LINC00167Q96N53 147 aa12.07□□□□□ -0.48
CCDC78-206ENST00000463539 F8W1H4 67 aa12.06□□□□□ -0.48
CCDC78-206ENST00000463539 KCNQ1DNQ9H478 68 aa12.06□□□□□ -0.48
CCDC78-206ENST00000463539 A0A087WYN8 130 aa12.05□□□□□ -0.48
CCDC78-206ENST00000463539 RPL37AP8A6NKH3 93 aa12.05□□□□□ -0.48
CCDC78-206ENST00000463539 C9JAW5 83 aa12.05□□□□□ -0.48
CCDC78-206ENST00000463539 PRO0461Q9UI25 63 aa12.05□□□□□ -0.48
CCDC78-206ENST00000463539 IGLV1-50A0A075B6I6 118 aa12.04□□□□□ -0.48
CCDC78-206ENST00000463539 PANO1I0J062 215 aa12.04□□□□□ -0.48
CCDC78-206ENST00000463539 TRACP01848 142 aa12.04□□□□□ -0.48
CCDC78-206ENST00000463539 SPACA4Q8TDM5 124 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms