RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
CMSS1-202ENST00000463526 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
CMSS1-202ENST00000463526 SPRR4Q96PI1 79 aa8.73□□□□□ -1.01
CMSS1-202ENST00000463526 LINC00158P58513 81 aa8.72□□□□□ -1.01
CMSS1-202ENST00000463526 TMEM170BQ5T4T1 132 aa8.72□□□□□ -1.01
CMSS1-202ENST00000463526 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
CMSS1-202ENST00000463526 DAND5Q8N907 189 aa8.72□□□□□ -1.01
CMSS1-202ENST00000463526 A0A096LNJ9 63 aa8.71□□□□□ -1.02
CMSS1-202ENST00000463526 TMEM218A2RU14 115 aa8.71□□□□□ -1.02
CMSS1-202ENST00000463526 C11orf86A6NJI1 115 aa8.71□□□□□ -1.02
CMSS1-202ENST00000463526 PMCHL1Q16048 86 aa8.71□□□□□ -1.02
CMSS1-202ENST00000463526 CLLU1Q5K131 121 aa8.7□□□□□ -1.02
CMSS1-202ENST00000463526 BAGE3Q86Y29 109 aa8.7□□□□□ -1.02
CMSS1-202ENST00000463526 COX19Q49B96 90 aa8.69□□□□□ -1.02
CMSS1-202ENST00000463526 Q8NBF4 154 aa8.69□□□□□ -1.02
CMSS1-202ENST00000463526 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
CMSS1-202ENST00000463526 URB1-AS1Q96HZ7 61 aa8.68□□□□□ -1.02
CMSS1-202ENST00000463526 ZNF706Q9Y5V0 76 aaPredicted RBP8.68□□□□□ -1.02
CMSS1-202ENST00000463526 HBDP02042 147 aa8.67□□□□□ -1.02
CMSS1-202ENST00000463526 LINC00614P0C842 121 aa8.67□□□□□ -1.02
CMSS1-202ENST00000463526 UQCC3Q6UW78 93 aa8.67□□□□□ -1.02
CMSS1-202ENST00000463526 ATP6V1G1O75348 118 aa8.66□□□□□ -1.02
CMSS1-202ENST00000463526 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
CMSS1-202ENST00000463526 SMCR5Q8TEV8 140 aa8.66□□□□□ -1.02
CMSS1-202ENST00000463526 SEC11CQ9BY50 192 aa8.66□□□□□ -1.02
CMSS1-202ENST00000463526 NCR3O14931 201 aa8.65□□□□□ -1.02
CMSS1-202ENST00000463526 SFTA2Q6UW10 78 aa8.65□□□□□ -1.02
CMSS1-202ENST00000463526 BOD1L2Q8IYS8 172 aa8.65□□□□□ -1.02
CMSS1-202ENST00000463526 C18orf32Q8TCD1 76 aa8.65□□□□□ -1.02
CMSS1-202ENST00000463526 SMIM13P0DJ93 91 aa8.64□□□□□ -1.03
CMSS1-202ENST00000463526 RPS10P5Q9NQ39 176 aa8.64□□□□□ -1.03
CMSS1-202ENST00000463526 CHTOPQ9Y3Y2 248 aaKnown RBP8.64□□□□□ -1.03
CMSS1-202ENST00000463526 TRAPPC1Q9Y5R8 145 aa8.64□□□□□ -1.03
CMSS1-202ENST00000463526 PRYO14603 147 aa8.63□□□□□ -1.03
CMSS1-202ENST00000463526 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
CMSS1-202ENST00000463526 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
CMSS1-202ENST00000463526 MEIG1Q5JSS6 88 aa8.63□□□□□ -1.03
CMSS1-202ENST00000463526 KRTAP4-1Q9BYQ7 146 aa8.63□□□□□ -1.03
CMSS1-202ENST00000463526 ETDCA0A1B0GVM5 59 aa8.62□□□□□ -1.03
CMSS1-202ENST00000463526 GAGE2AQ6NT46 116 aa8.62□□□□□ -1.03
CMSS1-202ENST00000463526 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
CMSS1-202ENST00000463526 SPINK1P00995 79 aa8.61□□□□□ -1.03
CMSS1-202ENST00000463526 MIR7-3HGQ8N6C7 128 aa8.6□□□□□ -1.03
CMSS1-202ENST00000463526 KCNQ1DNQ9H478 68 aa8.6□□□□□ -1.03
CMSS1-202ENST00000463526 IGLV9-49A0A0B4J1Y8 123 aa8.59□□□□□ -1.03
CMSS1-202ENST00000463526 TRBV10-3A0A0K0K1G6 114 aa8.59□□□□□ -1.03
CMSS1-202ENST00000463526 SPRR1AP35321 89 aa8.59□□□□□ -1.03
CMSS1-202ENST00000463526 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.03
CMSS1-202ENST00000463526 MOBPQ13875 183 aa8.58□□□□□ -1.04
CMSS1-202ENST00000463526 COMMD7Q86VX2 200 aa8.58□□□□□ -1.04
CMSS1-202ENST00000463526 KRTAP4-16G5E9R7 235 aaPredicted RBP8.57□□□□□ -1.04
CMSS1-202ENST00000463526 IFITM2Q01629 132 aa8.57□□□□□ -1.04
CMSS1-202ENST00000463526 RHEBQ15382 184 aa8.57□□□□□ -1.04
CMSS1-202ENST00000463526 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
CMSS1-202ENST00000463526 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
CMSS1-202ENST00000463526 LINC00483Q53H64 154 aa8.56□□□□□ -1.04
CMSS1-202ENST00000463526 IFI27L1Q96BM0 104 aa8.55□□□□□ -1.04
CMSS1-202ENST00000463526 TRAV12-1A0A0B4J245 112 aa8.54□□□□□ -1.04
CMSS1-202ENST00000463526 B5MCH6 92 aa8.54□□□□□ -1.04
CMSS1-202ENST00000463526 HERV-K104P63124 156 aa8.54□□□□□ -1.04
CMSS1-202ENST00000463526 S100A12P80511 92 aa8.54□□□□□ -1.04
CMSS1-202ENST00000463526 C10orf91Q5T1B1 145 aa8.53□□□□□ -1.04
CMSS1-202ENST00000463526 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
CMSS1-202ENST00000463526 Q8N377 158 aa8.53□□□□□ -1.04
CMSS1-202ENST00000463526 MAP1LC3CQ9BXW4 147 aa8.52□□□□□ -1.05
CMSS1-202ENST00000463526 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
CMSS1-202ENST00000463526 LINC00587B1AMM8 73 aa8.51□□□□□ -1.05
CMSS1-202ENST00000463526 SLC25A20O43772 301 aa8.51□□□□□ -1.05
CMSS1-202ENST00000463526 DDTP30046 118 aa8.51□□□□□ -1.05
CMSS1-202ENST00000463526 FAM19A2Q8N3H0 131 aa8.51□□□□□ -1.05
CMSS1-202ENST00000463526 H0Y8G0 127 aa8.5□□□□□ -1.05
CMSS1-202ENST00000463526 Q9BRP9 147 aa8.5□□□□□ -1.05
CMSS1-202ENST00000463526 C9orf153Q5TBE3 101 aa8.49□□□□□ -1.05
CMSS1-202ENST00000463526 CHCHD1Q96BP2 118 aaKnown RBP8.49□□□□□ -1.05
CMSS1-202ENST00000463526 TSPEAR-AS2P59090 65 aa8.48□□□□□ -1.05
CMSS1-202ENST00000463526 RPS29P62273 56 aaKnown RBP8.48□□□□□ -1.05
CMSS1-202ENST00000463526 APOC3P02656 99 aa8.47□□□□□ -1.05
CMSS1-202ENST00000463526 XP32Q5T750 250 aa8.47□□□□□ -1.05
CMSS1-202ENST00000463526 S100A7L2Q5SY68 101 aa8.46□□□□□ -1.06
CMSS1-202ENST00000463526 Q6ZRX8 168 aa8.46□□□□□ -1.06
CMSS1-202ENST00000463526 TRBV10-2A0A0K0K1G8 114 aa8.45□□□□□ -1.06
CMSS1-202ENST00000463526 FSIP2Q5CZC0 6907 aa8.44□□□□□ -1.06
CMSS1-202ENST00000463526 LEPROTO15243 131 aa8.44□□□□□ -1.06
CMSS1-202ENST00000463526 HSBP1O75506 76 aa8.44□□□□□ -1.06
CMSS1-202ENST00000463526 ST20-AS1Q8NBB2 130 aa8.44□□□□□ -1.06
CMSS1-202ENST00000463526 MIEN1Q9BRT3 115 aa8.44□□□□□ -1.06
CMSS1-202ENST00000463526 SPANXB1Q9NS25 103 aaPredicted RBP8.44□□□□□ -1.06
CMSS1-202ENST00000463526 CRCT1Q9UGL9 99 aa8.44□□□□□ -1.06
CMSS1-202ENST00000463526 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
CMSS1-202ENST00000463526 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
CMSS1-202ENST00000463526 NPC2P61916 151 aa8.42□□□□□ -1.06
CMSS1-202ENST00000463526 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
CMSS1-202ENST00000463526 TRAV23DV6A0A075B6W5 121 aa8.41□□□□□ -1.06
CMSS1-202ENST00000463526 J3QQQ9 107 aa8.41□□□□□ -1.06
CMSS1-202ENST00000463526 SNAPINO95295 136 aa8.41□□□□□ -1.06
CMSS1-202ENST00000463526 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
CMSS1-202ENST00000463526 JOSD1Q15040 202 aaPredicted RBP8.41□□□□□ -1.06
CMSS1-202ENST00000463526 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
CMSS1-202ENST00000463526 LGALS3P17931 250 aaKnown RBP8.4□□□□□ -1.06
CMSS1-202ENST00000463526 ZNF73O43830 326 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms