RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 C20orf202A1L168 122 aa14.16□□□□□ -0.14
SSNA1-203ENST00000463511 C1orf137Q5JT78 98 aa14.16□□□□□ -0.14
SSNA1-203ENST00000463511 SFTA2Q6UW10 78 aa14.16□□□□□ -0.14
SSNA1-203ENST00000463511 PHF5AQ7RTV0 110 aaKnown RBP14.16□□□□□ -0.14
SSNA1-203ENST00000463511 E9PLD3 99 aa14.14□□□□□ -0.15
SSNA1-203ENST00000463511 J3QQQ9 107 aa14.14□□□□□ -0.15
SSNA1-203ENST00000463511 C9orf129Q5T035 196 aaKnown RBP14.13□□□□□ -0.15
SSNA1-203ENST00000463511 NDUFA12Q9UI09 145 aa14.13□□□□□ -0.15
SSNA1-203ENST00000463511 ERG28Q9UKR5 140 aa14.13□□□□□ -0.15
SSNA1-203ENST00000463511 PFN2P35080 140 aa14.12□□□□□ -0.15
SSNA1-203ENST00000463511 ATOH7Q8N100 152 aa14.11□□□□□ -0.15
SSNA1-203ENST00000463511 MYMXA0A1B0GTQ4 84 aa14.1□□□□□ -0.15
SSNA1-203ENST00000463511 FAM168BA1KXE4 195 aa14.1□□□□□ -0.15
SSNA1-203ENST00000463511 COX17Q14061 63 aa14.1□□□□□ -0.15
SSNA1-203ENST00000463511 PRR26Q8N8Z3 221 aa14.1□□□□□ -0.15
SSNA1-203ENST00000463511 XAGE1AQ9HD64 81 aa14.1□□□□□ -0.15
SSNA1-203ENST00000463511 TMA7Q9Y2S6 64 aaKnown RBP14.1□□□□□ -0.15
SSNA1-203ENST00000463511 LGALS3P17931 250 aaKnown RBP14.09□□□□□ -0.15
SSNA1-203ENST00000463511 HERV-K104P63124 156 aa14.09□□□□□ -0.15
SSNA1-203ENST00000463511 AKR1D1P51857 326 aa14.08□□□□□ -0.16
SSNA1-203ENST00000463511 KRTAP7-1Q8IUC3 87 aa14.08□□□□□ -0.16
SSNA1-203ENST00000463511 IGKV2D-26A0A0A0MRZ7 120 aa14.07□□□□□ -0.16
SSNA1-203ENST00000463511 IGLV7-43P04211 117 aa14.07□□□□□ -0.16
SSNA1-203ENST00000463511 NMUP48645 174 aa14.07□□□□□ -0.16
SSNA1-203ENST00000463511 DIRC1Q969H9 104 aa14.07□□□□□ -0.16
SSNA1-203ENST00000463511 SMIM13P0DJ93 91 aa14.05□□□□□ -0.16
SSNA1-203ENST00000463511 LINC00158P58513 81 aa14.05□□□□□ -0.16
SSNA1-203ENST00000463511 ANKRD39Q53RE8 183 aa14.05□□□□□ -0.16
SSNA1-203ENST00000463511 A0A0U1RRA0 63 aa14.04□□□□□ -0.16
SSNA1-203ENST00000463511 MEIG1Q5JSS6 88 aa14.04□□□□□ -0.16
SSNA1-203ENST00000463511 FAM19A5Q7Z5A7 132 aaPredicted RBP14.04□□□□□ -0.16
SSNA1-203ENST00000463511 KRTAP11-1Q8IUC1 163 aa14.04□□□□□ -0.16
SSNA1-203ENST00000463511 SND1-IT1Q9HBX3 110 aa14.04□□□□□ -0.16
SSNA1-203ENST00000463511 H0Y9J4 135 aa14.02□□□□□ -0.17
SSNA1-203ENST00000463511 SCGB1D1O95968 90 aa14.02□□□□□ -0.17
SSNA1-203ENST00000463511 LINC00587B1AMM8 73 aa14.01□□□□□ -0.17
SSNA1-203ENST00000463511 TTTY13Q9BZ97 58 aa14□□□□□ -0.17
SSNA1-203ENST00000463511 A0A0J9YXY3 114 aa13.99□□□□□ -0.17
SSNA1-203ENST00000463511 MIR7-3HGQ8N6C7 128 aa13.98□□□□□ -0.17
SSNA1-203ENST00000463511 M0QXV9 152 aa13.97□□□□□ -0.17
SSNA1-203ENST00000463511 ZNF815PA8K554 130 aa13.96□□□□□ -0.17
SSNA1-203ENST00000463511 C22orf24Q9Y442 160 aa13.96□□□□□ -0.17
SSNA1-203ENST00000463511 IGLV1-50A0A075B6I6 118 aa13.95□□□□□ -0.18
SSNA1-203ENST00000463511 KRTAP1-4P0C5Y4 121 aa13.95□□□□□ -0.18
SSNA1-203ENST00000463511 IGLV5-37A0A075B6J1 123 aa13.94□□□□□ -0.18
SSNA1-203ENST00000463511 JOSD1Q15040 202 aaPredicted RBP13.93□□□□□ -0.18
SSNA1-203ENST00000463511 PCP2Q8IVA1 136 aa13.93□□□□□ -0.18
SSNA1-203ENST00000463511 DAND5Q8N907 189 aa13.93□□□□□ -0.18
SSNA1-203ENST00000463511 Q8NDZ9 215 aa13.93□□□□□ -0.18
SSNA1-203ENST00000463511 HSBP1L1C9JCN9 74 aa13.92□□□□□ -0.18
SSNA1-203ENST00000463511 VPREB1P12018 145 aa13.92□□□□□ -0.18
SSNA1-203ENST00000463511 UBE2BP63146 152 aa13.92□□□□□ -0.18
SSNA1-203ENST00000463511 ADAMTSL4-AS1Q5T5F5 129 aa13.92□□□□□ -0.18
SSNA1-203ENST00000463511 TP73-AS1Q9UF72 201 aa13.92□□□□□ -0.18
SSNA1-203ENST00000463511 TIMM17BO60830 172 aa13.9□□□□□ -0.18
SSNA1-203ENST00000463511 LITAFQ99732 161 aa13.9□□□□□ -0.18
SSNA1-203ENST00000463511 LOC107984156A0A0G2JMH3 177 aa13.89□□□□□ -0.19
SSNA1-203ENST00000463511 RPL24P83731 157 aaKnown RBP13.89□□□□□ -0.19
SSNA1-203ENST00000463511 PRR4Q16378 134 aa13.89□□□□□ -0.19
SSNA1-203ENST00000463511 LBHQ53QV2 105 aaPredicted RBP13.89□□□□□ -0.19
SSNA1-203ENST00000463511 MRPL55Q7Z7F7 128 aaKnown RBP13.89□□□□□ -0.19
SSNA1-203ENST00000463511 ARL17AQ8IVW1 177 aa13.89□□□□□ -0.19
SSNA1-203ENST00000463511 MUC2Q02817 5179 aa13.88□□□□□ -0.19
SSNA1-203ENST00000463511 NKAPP1Q8N9T2 125 aa13.88□□□□□ -0.19
SSNA1-203ENST00000463511 LINC00167Q96N53 147 aa13.88□□□□□ -0.19
SSNA1-203ENST00000463511 BOD1L2Q8IYS8 172 aa13.87□□□□□ -0.19
SSNA1-203ENST00000463511 EIF4EBP3O60516 100 aaPredicted RBP13.85□□□□□ -0.19
SSNA1-203ENST00000463511 RPL13AP40429 203 aaKnown RBP13.85□□□□□ -0.19
SSNA1-203ENST00000463511 SOSTDC1Q6X4U4 206 aa13.85□□□□□ -0.19
SSNA1-203ENST00000463511 GAGE10A6NGK3 116 aa13.84□□□□□ -0.19
SSNA1-203ENST00000463511 PYY3Q5JQD4 70 aa13.84□□□□□ -0.19
SSNA1-203ENST00000463511 SCGB1D4Q6XE38 83 aa13.84□□□□□ -0.19
SSNA1-203ENST00000463511 RPL37AP8A6NKH3 93 aa13.82□□□□□ -0.2
SSNA1-203ENST00000463511 NPC2P61916 151 aa13.82□□□□□ -0.2
SSNA1-203ENST00000463511 LINC00308Q8TCZ7 52 aa13.8□□□□□ -0.2
SSNA1-203ENST00000463511 MIEN1Q9BRT3 115 aa13.8□□□□□ -0.2
SSNA1-203ENST00000463511 PAM16Q9Y3D7 125 aa13.8□□□□□ -0.2
SSNA1-203ENST00000463511 M0R378 163 aa13.79□□□□□ -0.2
SSNA1-203ENST00000463511 SPATA45Q537H7 98 aa13.79□□□□□ -0.2
SSNA1-203ENST00000463511 VAMP8Q9BV40 100 aa13.79□□□□□ -0.2
SSNA1-203ENST00000463511 SPANXDQ9BXN6 97 aa13.79□□□□□ -0.2
SSNA1-203ENST00000463511 SPANXCQ9NY87 97 aa13.79□□□□□ -0.2
SSNA1-203ENST00000463511 TMEM238C9JI98 176 aa13.78□□□□□ -0.2
SSNA1-203ENST00000463511 COX8AP10176 69 aa13.78□□□□□ -0.2
SSNA1-203ENST00000463511 NCR3O14931 201 aa13.77□□□□□ -0.21
SSNA1-203ENST00000463511 ZNF861PO60384 105 aa13.77□□□□□ -0.21
SSNA1-203ENST00000463511 NDUFC2O95298 119 aa13.76□□□□□ -0.21
SSNA1-203ENST00000463511 IGKV2-28A0A075B6P5 120 aa13.75□□□□□ -0.21
SSNA1-203ENST00000463511 IGKV2D-28P01615 120 aa13.75□□□□□ -0.21
SSNA1-203ENST00000463511 TSPAN13O95857 204 aa13.74□□□□□ -0.21
SSNA1-203ENST00000463511 C14orf144Q96I85 54 aa13.74□□□□□ -0.21
SSNA1-203ENST00000463511 DLEU1O43261 78 aa13.73□□□□□ -0.21
SSNA1-203ENST00000463511 Q6ZVH6 145 aa13.73□□□□□ -0.21
SSNA1-203ENST00000463511 TRBV10-2A0A0K0K1G8 114 aa13.72□□□□□ -0.21
SSNA1-203ENST00000463511 SPANXB1Q9NS25 103 aaPredicted RBP13.72□□□□□ -0.21
SSNA1-203ENST00000463511 A0A0U1RQV1 116 aa13.71□□□□□ -0.21
SSNA1-203ENST00000463511 IFITM1P13164 125 aa13.71□□□□□ -0.21
SSNA1-203ENST00000463511 MUSTN1Q8IVN3 82 aa13.7□□□□□ -0.22
SSNA1-203ENST00000463511 PPDPFQ9H3Y8 114 aa13.7□□□□□ -0.22
SSNA1-203ENST00000463511 BCE1O60756 84 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms