RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ZNF22P17026 224 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-209ENST00000463244 DAND5Q8N907 189 aa11.68□□□□□ -0.54
CPSF7-209ENST00000463244 Q8NBF4 154 aa11.68□□□□□ -0.54
CPSF7-209ENST00000463244 ZNF706Q9Y5V0 76 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-209ENST00000463244 TRAV9-1A0A075B6T8 112 aa11.67□□□□□ -0.54
CPSF7-209ENST00000463244 FA2HQ7L5A8 372 aa11.66□□□□□ -0.54
CPSF7-209ENST00000463244 SEC61BP60468 96 aaKnown RBP11.65□□□□□ -0.54
CPSF7-209ENST00000463244 SMCO4Q9NRQ5 59 aa11.65□□□□□ -0.54
CPSF7-209ENST00000463244 SPINK1P00995 79 aa11.64□□□□□ -0.55
CPSF7-209ENST00000463244 SFTA2Q6UW10 78 aa11.64□□□□□ -0.55
CPSF7-209ENST00000463244 NDUFA6P56556 154 aa11.63□□□□□ -0.55
CPSF7-209ENST00000463244 CRCT1Q9UGL9 99 aa11.63□□□□□ -0.55
CPSF7-209ENST00000463244 A0A096LNJ9 63 aa11.61□□□□□ -0.55
CPSF7-209ENST00000463244 PRYO14603 147 aa11.6□□□□□ -0.55
CPSF7-209ENST00000463244 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
CPSF7-209ENST00000463244 LINC00158P58513 81 aa11.59□□□□□ -0.55
CPSF7-209ENST00000463244 SPRR1AP35321 89 aa11.58□□□□□ -0.56
CPSF7-209ENST00000463244 SMCR5Q8TEV8 140 aa11.58□□□□□ -0.56
CPSF7-209ENST00000463244 LINC00483Q53H64 154 aa11.57□□□□□ -0.56
CPSF7-209ENST00000463244 NDUFA12Q9UI09 145 aa11.57□□□□□ -0.56
CPSF7-209ENST00000463244 KRTAP4-16G5E9R7 235 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-209ENST00000463244 S100PP25815 95 aa11.56□□□□□ -0.56
CPSF7-209ENST00000463244 FABP9Q0Z7S8 132 aa11.56□□□□□ -0.56
CPSF7-209ENST00000463244 TMEM170BQ5T4T1 132 aa11.56□□□□□ -0.56
CPSF7-209ENST00000463244 KCNQ1DNQ9H478 68 aa11.56□□□□□ -0.56
CPSF7-209ENST00000463244 A0A0U1RRA0 63 aa11.55□□□□□ -0.56
CPSF7-209ENST00000463244 RPS29P62273 56 aaKnown RBP11.55□□□□□ -0.56
CPSF7-209ENST00000463244 COX19Q49B96 90 aa11.55□□□□□ -0.56
CPSF7-209ENST00000463244 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
CPSF7-209ENST00000463244 HBDP02042 147 aa11.54□□□□□ -0.56
CPSF7-209ENST00000463244 Q8N377 158 aa11.54□□□□□ -0.56
CPSF7-209ENST00000463244 URB1-AS1Q96HZ7 61 aa11.54□□□□□ -0.56
CPSF7-209ENST00000463244 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
CPSF7-209ENST00000463244 BOD1L2Q8IYS8 172 aa11.53□□□□□ -0.56
CPSF7-209ENST00000463244 ETDCA0A1B0GVM5 59 aa11.52□□□□□ -0.57
CPSF7-209ENST00000463244 XP32Q5T750 250 aa11.52□□□□□ -0.57
CPSF7-209ENST00000463244 NCR3O14931 201 aa11.51□□□□□ -0.57
CPSF7-209ENST00000463244 MOBPQ13875 183 aa11.51□□□□□ -0.57
CPSF7-209ENST00000463244 LCE2CQ5TA81 110 aa11.51□□□□□ -0.57
CPSF7-209ENST00000463244 GAGE2AQ6NT46 116 aa11.51□□□□□ -0.57
CPSF7-209ENST00000463244 TMEM218A2RU14 115 aa11.5□□□□□ -0.57
CPSF7-209ENST00000463244 LINC00614P0C842 121 aa11.5□□□□□ -0.57
CPSF7-209ENST00000463244 SMIM13P0DJ93 91 aa11.5□□□□□ -0.57
CPSF7-209ENST00000463244 PMCHL1Q16048 86 aa11.5□□□□□ -0.57
CPSF7-209ENST00000463244 IGLV9-49A0A0B4J1Y8 123 aa11.49□□□□□ -0.57
CPSF7-209ENST00000463244 SSBP3-AS1Q7Z2R9 100 aa11.49□□□□□ -0.57
CPSF7-209ENST00000463244 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
CPSF7-209ENST00000463244 TRBV10-3A0A0K0K1G6 114 aa11.48□□□□□ -0.57
CPSF7-209ENST00000463244 SLC25A20O43772 301 aa11.48□□□□□ -0.57
CPSF7-209ENST00000463244 ATP6V1G1O75348 118 aa11.48□□□□□ -0.57
CPSF7-209ENST00000463244 CLLU1Q5K131 121 aa11.48□□□□□ -0.57
CPSF7-209ENST00000463244 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
CPSF7-209ENST00000463244 UQCC3Q6UW78 93 aa11.47□□□□□ -0.57
CPSF7-209ENST00000463244 MIR7-3HGQ8N6C7 128 aa11.47□□□□□ -0.57
CPSF7-209ENST00000463244 SEC11CQ9BY50 192 aa11.47□□□□□ -0.57
CPSF7-209ENST00000463244 CHTOPQ9Y3Y2 248 aaKnown RBP11.47□□□□□ -0.57
CPSF7-209ENST00000463244 ERC2-IT1O76042 136 aa11.46□□□□□ -0.57
CPSF7-209ENST00000463244 B5MCH6 92 aa11.45□□□□□ -0.58
CPSF7-209ENST00000463244 MEIG1Q5JSS6 88 aa11.45□□□□□ -0.58
CPSF7-209ENST00000463244 KRTAP19-2Q3LHN2 52 aa11.44□□□□□ -0.58
CPSF7-209ENST00000463244 S100A12P80511 92 aa11.42□□□□□ -0.58
CPSF7-209ENST00000463244 HERV-K104P63124 156 aa11.41□□□□□ -0.58
CPSF7-209ENST00000463244 Q9BRP9 147 aa11.41□□□□□ -0.58
CPSF7-209ENST00000463244 TRAPPC1Q9Y5R8 145 aa11.4□□□□□ -0.58
CPSF7-209ENST00000463244 TRAV12-1A0A0B4J245 112 aa11.39□□□□□ -0.59
CPSF7-209ENST00000463244 LINC00587B1AMM8 73 aa11.39□□□□□ -0.59
CPSF7-209ENST00000463244 MT1HP80294 61 aa11.39□□□□□ -0.59
CPSF7-209ENST00000463244 Q6ZRX8 168 aa11.38□□□□□ -0.59
CPSF7-209ENST00000463244 DDTP30046 118 aa11.37□□□□□ -0.59
CPSF7-209ENST00000463244 RHEBQ15382 184 aa11.35□□□□□ -0.59
CPSF7-209ENST00000463244 MAP1LC3CQ9BXW4 147 aa11.35□□□□□ -0.59
CPSF7-209ENST00000463244 RPS10P5Q9NQ39 176 aa11.35□□□□□ -0.59
CPSF7-209ENST00000463244 LOC107984156A0A0G2JMH3 177 aa11.34□□□□□ -0.59
CPSF7-209ENST00000463244 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
CPSF7-209ENST00000463244 CFC1BP0CG36 223 aa11.34□□□□□ -0.59
CPSF7-209ENST00000463244 C9orf153Q5TBE3 101 aa11.34□□□□□ -0.59
CPSF7-209ENST00000463244 ARL17AQ8IVW1 177 aa11.34□□□□□ -0.59
CPSF7-209ENST00000463244 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
CPSF7-209ENST00000463244 MYMXA0A1B0GTQ4 84 aa11.33□□□□□ -0.6
CPSF7-209ENST00000463244 C10orf91Q5T1B1 145 aa11.32□□□□□ -0.6
CPSF7-209ENST00000463244 PCOTHQ58A44 107 aa11.31□□□□□ -0.6
CPSF7-209ENST00000463244 IGLV8-61A0A075B6I0 122 aa11.29□□□□□ -0.6
CPSF7-209ENST00000463244 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-209ENST00000463244 IGLV6-57P01721 117 aa11.28□□□□□ -0.6
CPSF7-209ENST00000463244 LORP23490 312 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-209ENST00000463244 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-209ENST00000463244 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
CPSF7-209ENST00000463244 TSPEAR-AS2P59090 65 aa11.27□□□□□ -0.61
CPSF7-209ENST00000463244 S100A7L2Q5SY68 101 aa11.25□□□□□ -0.61
CPSF7-209ENST00000463244 ST20-AS1Q8NBB2 130 aa11.25□□□□□ -0.61
CPSF7-209ENST00000463244 TRAV23DV6A0A075B6W5 121 aa11.24□□□□□ -0.61
CPSF7-209ENST00000463244 KRTAP10-6P60371 365 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-209ENST00000463244 IFITM2Q01629 132 aa11.24□□□□□ -0.61
CPSF7-209ENST00000463244 COMMD7Q86VX2 200 aa11.24□□□□□ -0.61
CPSF7-209ENST00000463244 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
CPSF7-209ENST00000463244 LEPROTO15243 131 aa11.23□□□□□ -0.61
CPSF7-209ENST00000463244 NDUFC2O95298 119 aa11.23□□□□□ -0.61
CPSF7-209ENST00000463244 MIEN1Q9BRT3 115 aa11.23□□□□□ -0.61
CPSF7-209ENST00000463244 LIMD2Q9BT23 127 aa11.23□□□□□ -0.61
CPSF7-209ENST00000463244 C5orf52A6NGY3 159 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms