RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 G0S2P27469 103 aa11.03□□□□□ -0.64
PTPN18-208ENST00000462996 RPS29P62273 56 aaKnown RBP11.03□□□□□ -0.64
PTPN18-208ENST00000462996 ERG28Q9UKR5 140 aa11.03□□□□□ -0.64
PTPN18-208ENST00000462996 PCOTHQ58A44 107 aa11.02□□□□□ -0.65
PTPN18-208ENST00000462996 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
PTPN18-208ENST00000462996 FLGP20930 4061 aaPredicted RBP11.02□□□□□ -0.65
PTPN18-208ENST00000462996 IGLV8-61A0A075B6I0 122 aa11.01□□□□□ -0.65
PTPN18-208ENST00000462996 SLC25A20O43772 301 aa11.01□□□□□ -0.65
PTPN18-208ENST00000462996 SMCR5Q8TEV8 140 aa11.01□□□□□ -0.65
PTPN18-208ENST00000462996 LINC00483Q53H64 154 aa11□□□□□ -0.65
PTPN18-208ENST00000462996 MRPL18Q9H0U6 180 aaKnown RBP11□□□□□ -0.65
PTPN18-208ENST00000462996 MOBPQ13875 183 aa10.99□□□□□ -0.65
PTPN18-208ENST00000462996 IGLV5-39A0A0G2JS06 123 aa10.98□□□□□ -0.65
PTPN18-208ENST00000462996 COX17Q14061 63 aa10.98□□□□□ -0.65
PTPN18-208ENST00000462996 ZNF625Q96I27 306 aaPredicted RBP10.98□□□□□ -0.65
PTPN18-208ENST00000462996 PEA15Q15121 130 aa10.97□□□□□ -0.65
PTPN18-208ENST00000462996 AKAP14Q86UN6 197 aa10.97□□□□□ -0.65
PTPN18-208ENST00000462996 IGLV9-49A0A0B4J1Y8 123 aa10.96□□□□□ -0.65
PTPN18-208ENST00000462996 H3BRM9 83 aa10.96□□□□□ -0.65
PTPN18-208ENST00000462996 M0R2T5 61 aa10.95□□□□□ -0.66
PTPN18-208ENST00000462996 GAGE2AQ6NT46 116 aa10.95□□□□□ -0.66
PTPN18-208ENST00000462996 SSBP3-AS1Q7Z2R9 100 aa10.95□□□□□ -0.66
PTPN18-208ENST00000462996 PMVKQ15126 192 aa10.94□□□□□ -0.66
PTPN18-208ENST00000462996 SPRR1AP35321 89 aa10.93□□□□□ -0.66
PTPN18-208ENST00000462996 KRTAP4-16G5E9R7 235 aaPredicted RBP10.92□□□□□ -0.66
PTPN18-208ENST00000462996 PRYO14603 147 aa10.92□□□□□ -0.66
PTPN18-208ENST00000462996 KIAA1644Q3SXP7 199 aa10.9□□□□□ -0.66
PTPN18-208ENST00000462996 ERC2-IT1O76042 136 aa10.89□□□□□ -0.67
PTPN18-208ENST00000462996 IGLC3P0DOY3 106 aa10.89□□□□□ -0.67
PTPN18-208ENST00000462996 KCNQ1DNQ9H478 68 aa10.89□□□□□ -0.67
PTPN18-208ENST00000462996 ZNF22P17026 224 aaPredicted RBP10.88□□□□□ -0.67
PTPN18-208ENST00000462996 ETDCA0A1B0GVM5 59 aa10.87□□□□□ -0.67
PTPN18-208ENST00000462996 LINC01549A6NIU2 74 aa10.87□□□□□ -0.67
PTPN18-208ENST00000462996 LINC01546A6NGU7 62 aa10.86□□□□□ -0.67
PTPN18-208ENST00000462996 LINC00158P58513 81 aa10.86□□□□□ -0.67
PTPN18-208ENST00000462996 C9orf92A6NGG3 77 aa10.85□□□□□ -0.67
PTPN18-208ENST00000462996 A0A0U1RRA0 63 aa10.84□□□□□ -0.67
PTPN18-208ENST00000462996 SSPOA2VEC9 5147 aa10.83□□□□□ -0.68
PTPN18-208ENST00000462996 NCR3O14931 201 aa10.83□□□□□ -0.68
PTPN18-208ENST00000462996 ANAPC16Q96DE5 110 aa10.83□□□□□ -0.68
PTPN18-208ENST00000462996 B5MCH6 92 aa10.81□□□□□ -0.68
PTPN18-208ENST00000462996 MT-ND4LP03901 98 aa10.81□□□□□ -0.68
PTPN18-208ENST00000462996 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
PTPN18-208ENST00000462996 USH2AO75445 5202 aa10.8□□□□□ -0.68
PTPN18-208ENST00000462996 TRBV10-3A0A0K0K1G6 114 aa10.8□□□□□ -0.68
PTPN18-208ENST00000462996 BOD1L2Q8IYS8 172 aa10.8□□□□□ -0.68
PTPN18-208ENST00000462996 Q9BRP9 147 aa10.8□□□□□ -0.68
PTPN18-208ENST00000462996 NDUFA6P56556 154 aa10.79□□□□□ -0.68
PTPN18-208ENST00000462996 COX6B2Q6YFQ2 88 aa10.79□□□□□ -0.68
PTPN18-208ENST00000462996 C9orf153Q5TBE3 101 aa10.78□□□□□ -0.68
PTPN18-208ENST00000462996 hCG_2014768A0A024R1R8 64 aa10.76□□□□□ -0.69
PTPN18-208ENST00000462996 C11orf86A6NJI1 115 aa10.76□□□□□ -0.69
PTPN18-208ENST00000462996 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
PTPN18-208ENST00000462996 TRAV9-1A0A075B6T8 112 aa10.74□□□□□ -0.69
PTPN18-208ENST00000462996 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
PTPN18-208ENST00000462996 FA2HQ7L5A8 372 aa10.73□□□□□ -0.69
PTPN18-208ENST00000462996 A0A096LNJ9 63 aa10.72□□□□□ -0.69
PTPN18-208ENST00000462996 MIR7-3HGQ8N6C7 128 aa10.72□□□□□ -0.69
PTPN18-208ENST00000462996 ATP6V1G1O75348 118 aa10.71□□□□□ -0.69
PTPN18-208ENST00000462996 Q6ZRX8 168 aa10.71□□□□□ -0.69
PTPN18-208ENST00000462996 SMCO4Q9NRQ5 59 aa10.71□□□□□ -0.69
PTPN18-208ENST00000462996 FCGBPQ9Y6R7 5405 aaPredicted RBP10.7□□□□□ -0.7
PTPN18-208ENST00000462996 IGLV6-57P01721 117 aa10.7□□□□□ -0.7
PTPN18-208ENST00000462996 HRCT1Q6UXD1 115 aa10.69□□□□□ -0.7
PTPN18-208ENST00000462996 S100A12P80511 92 aa10.68□□□□□ -0.7
PTPN18-208ENST00000462996 LIMD2Q9BT23 127 aa10.68□□□□□ -0.7
PTPN18-208ENST00000462996 BAGE3Q86Y29 109 aa10.67□□□□□ -0.7
PTPN18-208ENST00000462996 MEIG1Q5JSS6 88 aa10.66□□□□□ -0.7
PTPN18-208ENST00000462996 ST20-AS1Q8NBB2 130 aa10.66□□□□□ -0.7
PTPN18-208ENST00000462996 DDTP30046 118 aa10.65□□□□□ -0.7
PTPN18-208ENST00000462996 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
PTPN18-208ENST00000462996 RPL37P61927 97 aaKnown RBP10.63□□□□□ -0.71
PTPN18-208ENST00000462996 URB1-AS1Q96HZ7 61 aa10.63□□□□□ -0.71
PTPN18-208ENST00000462996 PMCHL1Q16048 86 aa10.61□□□□□ -0.71
PTPN18-208ENST00000462996 TRBV10-2A0A0K0K1G8 114 aa10.59□□□□□ -0.71
PTPN18-208ENST00000462996 HBDP02042 147 aa10.59□□□□□ -0.71
PTPN18-208ENST00000462996 HERV-K104P63124 156 aa10.59□□□□□ -0.71
PTPN18-208ENST00000462996 CHTOPQ9Y3Y2 248 aaKnown RBP10.59□□□□□ -0.71
PTPN18-208ENST00000462996 JOSD1Q15040 202 aaPredicted RBP10.58□□□□□ -0.72
PTPN18-208ENST00000462996 KRTAP9-8Q9BYQ0 159 aa10.58□□□□□ -0.72
PTPN18-208ENST00000462996 LOC107984156A0A0G2JMH3 177 aa10.57□□□□□ -0.72
PTPN18-208ENST00000462996 FABP9Q0Z7S8 132 aa10.57□□□□□ -0.72
PTPN18-208ENST00000462996 ARL17AQ8IVW1 177 aa10.57□□□□□ -0.72
PTPN18-208ENST00000462996 LINC00614P0C842 121 aa10.56□□□□□ -0.72
PTPN18-208ENST00000462996 LINC00587B1AMM8 73 aa10.55□□□□□ -0.72
PTPN18-208ENST00000462996 CFC1P0CG37 223 aa10.55□□□□□ -0.72
PTPN18-208ENST00000462996 SPRR1BP22528 89 aa10.54□□□□□ -0.72
PTPN18-208ENST00000462996 MAP1LC3CQ9BXW4 147 aa10.54□□□□□ -0.72
PTPN18-208ENST00000462996 C5orf52A6NGY3 159 aa10.53□□□□□ -0.72
PTPN18-208ENST00000462996 SPANXB1Q9NS25 103 aaPredicted RBP10.53□□□□□ -0.72
PTPN18-208ENST00000462996 TRAV23DV6A0A075B6W5 121 aa10.52□□□□□ -0.73
PTPN18-208ENST00000462996 S100A7L2Q5SY68 101 aa10.52□□□□□ -0.73
PTPN18-208ENST00000462996 C18orf32Q8TCD1 76 aa10.52□□□□□ -0.73
PTPN18-208ENST00000462996 C1orf195Q5TG92 126 aa10.51□□□□□ -0.73
PTPN18-208ENST00000462996 Q6Q795 121 aa10.51□□□□□ -0.73
PTPN18-208ENST00000462996 MYMXA0A1B0GTQ4 84 aa10.5□□□□□ -0.73
PTPN18-208ENST00000462996 H7C2G1 150 aa10.5□□□□□ -0.73
PTPN18-208ENST00000462996 ZNF73O43830 326 aaPredicted RBP10.5□□□□□ -0.73
PTPN18-208ENST00000462996 CD164Q04900 197 aa10.49□□□□□ -0.73
PTPN18-208ENST00000462996 COX19Q49B96 90 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms