RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ANKRD39Q53RE8 183 aa4□□□□□ -1.77
SF3B1-206ENST00000462613 BOD1L2Q8IYS8 172 aa4□□□□□ -1.77
SF3B1-206ENST00000462613 VAMP8Q9BV40 100 aa4□□□□□ -1.77
SF3B1-206ENST00000462613 CBY1Q9Y3M2 126 aa4□□□□□ -1.77
SF3B1-206ENST00000462613 DNAH11Q96DT5 4516 aa4□□□□□ -1.77
SF3B1-206ENST00000462613 IGLV5-37A0A075B6J1 123 aa3.99□□□□□ -1.77
SF3B1-206ENST00000462613 JOSD1Q15040 202 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-206ENST00000462613 C1orf137Q5JT78 98 aa3.99□□□□□ -1.77
SF3B1-206ENST00000462613 SERTAD4-AS1Q5TG53 156 aa3.99□□□□□ -1.77
SF3B1-206ENST00000462613 Q6ZVH6 145 aa3.99□□□□□ -1.77
SF3B1-206ENST00000462613 M0R378 163 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 NDUFC2O95298 119 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 INAFM2P0DMQ5 153 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 VPREB1P12018 145 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 IFITM1P13164 125 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 PRR3P79522 188 aaKnown RBP3.98□□□□□ -1.77
SF3B1-206ENST00000462613 SRSF9Q13242 221 aaKnown RBP eCLIP3.98□□□□□ -1.77
SF3B1-206ENST00000462613 S100A7L2Q5SY68 101 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 DAND5Q8N907 189 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 PSORS1C2Q9UIG4 136 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 PAM16Q9Y3D7 125 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 BIRC6Q9NR09 4857 aa3.98□□□□□ -1.77
SF3B1-206ENST00000462613 LOC107984156A0A0G2JMH3 177 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 TRBV10-2A0A0K0K1G8 114 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 GAGE10A6NGK3 116 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 RPL37AP8A6NKH3 93 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 NCR3O14931 201 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 NPC2P61916 151 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 SPATA45Q537H7 98 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 PCP2Q8IVA1 136 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 ARL17AQ8IVW1 177 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 LINC00518Q8N0U6 118 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 LINC00167Q96N53 147 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 SPANXDQ9BXN6 97 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 TTTY13Q9BZ97 58 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 SPANXB1Q9NS25 103 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-206ENST00000462613 SPANXCQ9NY87 97 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
SF3B1-206ENST00000462613 DYNC1H1Q14204 4646 aaKnown RBP3.97□□□□□ -1.77
SF3B1-206ENST00000462613 IGKV2-28A0A075B6P5 120 aa3.96□□□□□ -1.78
SF3B1-206ENST00000462613 IGKV2D-28P01615 120 aa3.96□□□□□ -1.78
SF3B1-206ENST00000462613 COX8AP10176 69 aa3.96□□□□□ -1.78
SF3B1-206ENST00000462613 UBE2AP49459 152 aa3.96□□□□□ -1.78
SF3B1-206ENST00000462613 REG3GQ6UW15 175 aa3.96□□□□□ -1.78
SF3B1-206ENST00000462613 SPINK6Q6UWN8 80 aa3.96□□□□□ -1.78
SF3B1-206ENST00000462613 LINC00308Q8TCZ7 52 aa3.96□□□□□ -1.78
SF3B1-206ENST00000462613 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 LRP1BQ9NZR2 4599 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 IGLV1-50A0A075B6I6 118 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 PRYO14603 147 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 DLEU1O43261 78 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 BCE1O60756 84 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 IGLV7-43P04211 117 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 DDTP30046 118 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 RPL28P46779 137 aaKnown RBP3.95□□□□□ -1.78
SF3B1-206ENST00000462613 HINT1P49773 126 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-206ENST00000462613 HNRNPA3P51991 378 aaKnown RBP3.95□□□□□ -1.78
SF3B1-206ENST00000462613 ADAMTSL4-AS1Q5T5F5 129 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 SLC25A34Q6PIV7 304 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 KRTAP7-1Q8IUC3 87 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 OR13C6PQ8NH95 151 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 DIRC1Q969H9 104 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 KRTAP17-1Q9BYP8 105 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 PPDPFQ9H3Y8 114 aa3.95□□□□□ -1.78
SF3B1-206ENST00000462613 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
SF3B1-206ENST00000462613 PYY3Q5JQD4 70 aa3.94□□□□□ -1.78
SF3B1-206ENST00000462613 FAM19A1Q7Z5A9 133 aa3.94□□□□□ -1.78
SF3B1-206ENST00000462613 C14orf144Q96I85 54 aa3.94□□□□□ -1.78
SF3B1-206ENST00000462613 HIST1H4GQ99525 98 aa3.94□□□□□ -1.78
SF3B1-206ENST00000462613 LITAFQ99732 161 aa3.94□□□□□ -1.78
SF3B1-206ENST00000462613 TMEM126AQ9H061 195 aa3.94□□□□□ -1.78
SF3B1-206ENST00000462613 ZNF861PO60384 105 aa3.93□□□□□ -1.78
SF3B1-206ENST00000462613 TRAV23DV6A0A075B6W5 121 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 TRAV13-2A0A0B4J235 113 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 TRBV10-3A0A0K0K1G6 114 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 TMEM238LA0A1B0GVL6 79 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 A6NDN8 102 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 A6NJY4 79 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 KRTAP10-4P60372 401 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-206ENST00000462613 SOSTDC1Q6X4U4 206 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 MUSTN1Q8IVN3 82 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 KRTAP4-5Q9BYR2 181 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 KCNQ1DNQ9H478 68 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 HIGD1BQ9P298 99 aa3.92□□□□□ -1.78
SF3B1-206ENST00000462613 APOBP04114 4563 aaKnown RBP3.92□□□□□ -1.78
SF3B1-206ENST00000462613 SRRM2Q9UQ35 2752 aaKnown RBP3.91□□□□□ -1.78
SF3B1-206ENST00000462613 H0Y9J4 135 aa3.91□□□□□ -1.78
SF3B1-206ENST00000462613 J3QL48 77 aa3.91□□□□□ -1.78
SF3B1-206ENST00000462613 OXTP01178 125 aa3.91□□□□□ -1.78
SF3B1-206ENST00000462613 SMIM6P0DI80 62 aa3.91□□□□□ -1.78
SF3B1-206ENST00000462613 TAL2Q16559 108 aa3.91□□□□□ -1.78
SF3B1-206ENST00000462613 LINC00337Q8N6G1 96 aa3.91□□□□□ -1.78
SF3B1-206ENST00000462613 Q8NDZ9 215 aa3.91□□□□□ -1.78
SF3B1-206ENST00000462613 HSPG2P98160 4391 aa3.91□□□□□ -1.78
SF3B1-206ENST00000462613 RYR1P21817 5038 aa3.9□□□□□ -1.78
SF3B1-206ENST00000462613 FLG2Q5D862 2391 aaPredicted RBP3.9□□□□□ -1.78
SF3B1-206ENST00000462613 ZNF73O43830 326 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-206ENST00000462613 IGLV6-57P01721 117 aa3.9□□□□□ -1.79
SF3B1-206ENST00000462613 PRLHP81277 87 aa3.9□□□□□ -1.79
SF3B1-206ENST00000462613 KRTAP11-1Q8IUC1 163 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms