RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 CFC1P0CG37 223 aa9.91□□□□□ -0.82
RPRD1B-203ENST00000462548 WWC2-AS2Q96NR7 200 aa9.9□□□□□ -0.83
RPRD1B-203ENST00000462548 SNCGO76070 127 aa9.89□□□□□ -0.83
RPRD1B-203ENST00000462548 ANKRD29Q8N6D5 301 aa9.89□□□□□ -0.83
RPRD1B-203ENST00000462548 RMI2Q96E14 147 aa9.89□□□□□ -0.83
RPRD1B-203ENST00000462548 GVQW2A0A096LPI5 108 aaPredicted RBP9.88□□□□□ -0.83
RPRD1B-203ENST00000462548 NBDYA0A0U1RRE5 68 aa9.88□□□□□ -0.83
RPRD1B-203ENST00000462548 ZNF561-AS1K7EIQ3 104 aa9.88□□□□□ -0.83
RPRD1B-203ENST00000462548 C5orf47Q569G3 176 aa9.88□□□□□ -0.83
RPRD1B-203ENST00000462548 C6orf48Q9UBA6 75 aa9.88□□□□□ -0.83
RPRD1B-203ENST00000462548 LOC107984156A0A0G2JMH3 177 aa9.88□□□□□ -0.83
RPRD1B-203ENST00000462548 ARL17AQ8IVW1 177 aa9.88□□□□□ -0.83
RPRD1B-203ENST00000462548 USP17L23D6RBM5 183 aa9.87□□□□□ -0.83
RPRD1B-203ENST00000462548 LECT2O14960 151 aa9.87□□□□□ -0.83
RPRD1B-203ENST00000462548 Q6ZRU5 148 aa9.87□□□□□ -0.83
RPRD1B-203ENST00000462548 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
RPRD1B-203ENST00000462548 C2orf48Q96LS8 159 aa9.85□□□□□ -0.83
RPRD1B-203ENST00000462548 A0A0B4J2C4 111 aa9.84□□□□□ -0.83
RPRD1B-203ENST00000462548 TCL1BO95988 128 aa9.84□□□□□ -0.83
RPRD1B-203ENST00000462548 SLPIP03973 132 aa9.84□□□□□ -0.83
RPRD1B-203ENST00000462548 Q6Q795 121 aa9.84□□□□□ -0.83
RPRD1B-203ENST00000462548 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.84□□□□□ -0.83
RPRD1B-203ENST00000462548 M0R2N4 97 aa9.84□□□□□ -0.83
RPRD1B-203ENST00000462548 COX17Q14061 63 aa9.84□□□□□ -0.83
RPRD1B-203ENST00000462548 KMT2AQ03164 3969 aa9.83□□□□□ -0.84
RPRD1B-203ENST00000462548 TMEM126AQ9H061 195 aa9.83□□□□□ -0.84
RPRD1B-203ENST00000462548 PRO1854Q9UHT4 67 aa9.83□□□□□ -0.84
RPRD1B-203ENST00000462548 TRBV30A0A0K0K1B3 111 aa9.82□□□□□ -0.84
RPRD1B-203ENST00000462548 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
RPRD1B-203ENST00000462548 ALMS1Q8TCU4 4167 aa9.81□□□□□ -0.84
RPRD1B-203ENST00000462548 SYCNQ0VAF6 134 aa9.81□□□□□ -0.84
RPRD1B-203ENST00000462548 COPS9Q8WXC6 57 aa9.81□□□□□ -0.84
RPRD1B-203ENST00000462548 Q6ZRN7 208 aaPredicted RBP9.81□□□□□ -0.84
RPRD1B-203ENST00000462548 DNAH2Q9P225 4427 aa9.8□□□□□ -0.84
RPRD1B-203ENST00000462548 LOC107984640A0A0U1RRK4 108 aa9.8□□□□□ -0.84
RPRD1B-203ENST00000462548 Q8NDZ9 215 aa9.8□□□□□ -0.84
RPRD1B-203ENST00000462548 DNAH6Q9C0G6 4158 aa9.8□□□□□ -0.84
RPRD1B-203ENST00000462548 IGKV2-28A0A075B6P5 120 aa9.8□□□□□ -0.84
RPRD1B-203ENST00000462548 PSCAO43653 123 aa9.8□□□□□ -0.84
RPRD1B-203ENST00000462548 IGKV2D-28P01615 120 aa9.8□□□□□ -0.84
RPRD1B-203ENST00000462548 H7C2G1 150 aa9.79□□□□□ -0.84
RPRD1B-203ENST00000462548 F8WDY8 70 aa9.78□□□□□ -0.84
RPRD1B-203ENST00000462548 LYRM7Q5U5X0 104 aa9.78□□□□□ -0.84
RPRD1B-203ENST00000462548 Q6ZR54 194 aa9.78□□□□□ -0.84
RPRD1B-203ENST00000462548 LY6G6CO95867 125 aa9.77□□□□□ -0.84
RPRD1B-203ENST00000462548 SCGB1C2P0DMR2 95 aa9.77□□□□□ -0.85
RPRD1B-203ENST00000462548 RPL13AP40429 203 aaKnown RBP9.77□□□□□ -0.85
RPRD1B-203ENST00000462548 LINC00337Q8N6G1 96 aa9.77□□□□□ -0.85
RPRD1B-203ENST00000462548 XAGE1AQ9HD64 81 aa9.77□□□□□ -0.85
RPRD1B-203ENST00000462548 SLC25A20O43772 301 aa9.76□□□□□ -0.85
RPRD1B-203ENST00000462548 PRR3P79522 188 aaKnown RBP9.76□□□□□ -0.85
RPRD1B-203ENST00000462548 LINC00476Q8WZB0 136 aa9.76□□□□□ -0.85
RPRD1B-203ENST00000462548 LRCOL1A6NCL2 159 aa9.76□□□□□ -0.85
RPRD1B-203ENST00000462548 C3orf84H3BNL1 204 aa9.76□□□□□ -0.85
RPRD1B-203ENST00000462548 Q6ZRP5 223 aa9.75□□□□□ -0.85
RPRD1B-203ENST00000462548 NDUFC2-KCTD14E9PQ53 114 aa9.75□□□□□ -0.85
RPRD1B-203ENST00000462548 C9JAW5 83 aa9.74□□□□□ -0.85
RPRD1B-203ENST00000462548 Q1RN00 199 aa9.73□□□□□ -0.85
RPRD1B-203ENST00000462548 FAM19A5Q7Z5A7 132 aaPredicted RBP9.73□□□□□ -0.85
RPRD1B-203ENST00000462548 NDUFC2O95298 119 aa9.72□□□□□ -0.85
RPRD1B-203ENST00000462548 TRIAP1O43715 76 aa9.71□□□□□ -0.85
RPRD1B-203ENST00000462548 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.71□□□□□ -0.86
RPRD1B-203ENST00000462548 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.86
RPRD1B-203ENST00000462548 NCR3O14931 201 aa9.71□□□□□ -0.86
RPRD1B-203ENST00000462548 TLX1NBP0CAT3 122 aa9.71□□□□□ -0.86
RPRD1B-203ENST00000462548 DNAH17Q9UFH2 4485 aa9.7□□□□□ -0.86
RPRD1B-203ENST00000462548 C9orf129Q5T035 196 aaKnown RBP9.7□□□□□ -0.86
RPRD1B-203ENST00000462548 HYDINQ4G0P3 5121 aa9.7□□□□□ -0.86
RPRD1B-203ENST00000462548 TEX49A0A1B0GTD5 131 aa9.7□□□□□ -0.86
RPRD1B-203ENST00000462548 CNBPP62633 177 aaKnown RBP9.7□□□□□ -0.86
RPRD1B-203ENST00000462548 RPL18AQ02543 176 aaKnown RBP9.7□□□□□ -0.86
RPRD1B-203ENST00000462548 J3KT08 172 aa9.68□□□□□ -0.86
RPRD1B-203ENST00000462548 C14orf177Q52M58 125 aa9.68□□□□□ -0.86
RPRD1B-203ENST00000462548 C9orf153Q5TBE3 101 aa9.68□□□□□ -0.86
RPRD1B-203ENST00000462548 OR13C6PQ8NH95 151 aa9.67□□□□□ -0.86
RPRD1B-203ENST00000462548 VPREB1P12018 145 aa9.67□□□□□ -0.86
RPRD1B-203ENST00000462548 SACSQ9NZJ4 4579 aa9.66□□□□□ -0.86
RPRD1B-203ENST00000462548 A0A087WTM6 91 aa9.66□□□□□ -0.86
RPRD1B-203ENST00000462548 SMIM11BQ8TCY0 68 aa9.66□□□□□ -0.86
RPRD1B-203ENST00000462548 C1orf134Q5TEV5 83 aa9.65□□□□□ -0.86
RPRD1B-203ENST00000462548 Q8N814 137 aa9.65□□□□□ -0.86
RPRD1B-203ENST00000462548 FAM236AA0A1B0GUQ0 79 aa9.64□□□□□ -0.87
RPRD1B-203ENST00000462548 FAM236BA0A1B0GV22 79 aa9.64□□□□□ -0.87
RPRD1B-203ENST00000462548 SERTAD4-AS1Q5TG53 156 aa9.64□□□□□ -0.87
RPRD1B-203ENST00000462548 C3orf22Q8N5N4 141 aa9.64□□□□□ -0.87
RPRD1B-203ENST00000462548 TRBV7-7A0A0K0K1E9 115 aa9.64□□□□□ -0.87
RPRD1B-203ENST00000462548 A0A1B0GX51 115 aa9.64□□□□□ -0.87
RPRD1B-203ENST00000462548 RPL28P46779 137 aaKnown RBP9.64□□□□□ -0.87
RPRD1B-203ENST00000462548 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
RPRD1B-203ENST00000462548 LINC01620Q4KN68 170 aa9.63□□□□□ -0.87
RPRD1B-203ENST00000462548 KRTAP7-1Q8IUC3 87 aa9.63□□□□□ -0.87
RPRD1B-203ENST00000462548 CLEC2BQ92478 149 aa9.63□□□□□ -0.87
RPRD1B-203ENST00000462548 TRBV10-2A0A0K0K1G8 114 aa9.62□□□□□ -0.87
RPRD1B-203ENST00000462548 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
RPRD1B-203ENST00000462548 FRAS1Q86XX4 4008 aa9.62□□□□□ -0.87
RPRD1B-203ENST00000462548 A0A096LNI7 61 aa9.62□□□□□ -0.87
RPRD1B-203ENST00000462548 IGLV6-57P01721 117 aa9.61□□□□□ -0.87
RPRD1B-203ENST00000462548 C9orf163Q8N9P6 203 aa9.61□□□□□ -0.87
RPRD1B-203ENST00000462548 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
RPRD1B-203ENST00000462548 HECTD4Q9Y4D8 3996 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms