RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 C9orf116Q5BN46 136 aaPredicted RBP8.76□□□□□ -1.01
PBRM1-219ENST00000462207 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
PBRM1-219ENST00000462207 C6orf48Q9UBA6 75 aa8.76□□□□□ -1.01
PBRM1-219ENST00000462207 CXCL5P42830 114 aa8.76□□□□□ -1.01
PBRM1-219ENST00000462207 CARD19Q96LW7 228 aa8.76□□□□□ -1.01
PBRM1-219ENST00000462207 CDIP1Q9H305 208 aa8.75□□□□□ -1.01
PBRM1-219ENST00000462207 KRTAP10-2P60368 255 aa8.74□□□□□ -1.01
PBRM1-219ENST00000462207 LINC01620Q4KN68 170 aa8.74□□□□□ -1.01
PBRM1-219ENST00000462207 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
PBRM1-219ENST00000462207 SMCPP49901 116 aaPredicted RBP8.74□□□□□ -1.01
PBRM1-219ENST00000462207 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
PBRM1-219ENST00000462207 FRAS1Q86XX4 4008 aa8.73□□□□□ -1.01
PBRM1-219ENST00000462207 RYR3Q15413 4870 aa8.73□□□□□ -1.01
PBRM1-219ENST00000462207 A0A0J9YXY3 114 aa8.72□□□□□ -1.01
PBRM1-219ENST00000462207 FAT2Q9NYQ8 4349 aa8.72□□□□□ -1.01
PBRM1-219ENST00000462207 A0A0U1RRA0 63 aa8.72□□□□□ -1.01
PBRM1-219ENST00000462207 TRBV30A0A0K0K1B3 111 aa8.71□□□□□ -1.02
PBRM1-219ENST00000462207 F8WDY8 70 aa8.71□□□□□ -1.02
PBRM1-219ENST00000462207 HERV-K104P63124 156 aa8.71□□□□□ -1.02
PBRM1-219ENST00000462207 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.02
PBRM1-219ENST00000462207 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
PBRM1-219ENST00000462207 IGLV5-52A0A0A0MRZ9 124 aa8.7□□□□□ -1.02
PBRM1-219ENST00000462207 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.7□□□□□ -1.02
PBRM1-219ENST00000462207 PFN2P35080 140 aa8.7□□□□□ -1.02
PBRM1-219ENST00000462207 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
PBRM1-219ENST00000462207 A0A1B0GVY2 172 aa8.7□□□□□ -1.02
PBRM1-219ENST00000462207 TCL1BO95988 128 aa8.7□□□□□ -1.02
PBRM1-219ENST00000462207 SFTA2Q6UW10 78 aa8.7□□□□□ -1.02
PBRM1-219ENST00000462207 MT-ATP8P03928 68 aa8.69□□□□□ -1.02
PBRM1-219ENST00000462207 SCGB1C2P0DMR2 95 aa8.69□□□□□ -1.02
PBRM1-219ENST00000462207 XGP55808 180 aa8.69□□□□□ -1.02
PBRM1-219ENST00000462207 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
PBRM1-219ENST00000462207 DAND5Q8N907 189 aa8.68□□□□□ -1.02
PBRM1-219ENST00000462207 A0A0B4J2C4 111 aa8.68□□□□□ -1.02
PBRM1-219ENST00000462207 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
PBRM1-219ENST00000462207 CFC1P0CG37 223 aa8.68□□□□□ -1.02
PBRM1-219ENST00000462207 ANKRD29Q8N6D5 301 aa8.68□□□□□ -1.02
PBRM1-219ENST00000462207 LITAFQ99732 161 aa8.68□□□□□ -1.02
PBRM1-219ENST00000462207 ANAPC13Q9BS18 74 aa8.68□□□□□ -1.02
PBRM1-219ENST00000462207 LINC00158P58513 81 aa8.67□□□□□ -1.02
PBRM1-219ENST00000462207 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
PBRM1-219ENST00000462207 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
PBRM1-219ENST00000462207 SLC25A20O43772 301 aa8.66□□□□□ -1.02
PBRM1-219ENST00000462207 Q6ZRP5 223 aa8.66□□□□□ -1.02
PBRM1-219ENST00000462207 NDUFC2-KCTD14E9PQ53 114 aa8.66□□□□□ -1.02
PBRM1-219ENST00000462207 LINC01600Q96MT4 127 aa8.66□□□□□ -1.02
PBRM1-219ENST00000462207 DNAH11Q96DT5 4516 aa8.65□□□□□ -1.02
PBRM1-219ENST00000462207 A0A096LNI7 61 aa8.65□□□□□ -1.02
PBRM1-219ENST00000462207 ATXN8Q156A1 80 aa8.65□□□□□ -1.02
PBRM1-219ENST00000462207 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
PBRM1-219ENST00000462207 SDIM1Q6ZPB5 146 aa8.65□□□□□ -1.02
PBRM1-219ENST00000462207 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
PBRM1-219ENST00000462207 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
PBRM1-219ENST00000462207 LOC107984640A0A0U1RRK4 108 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 CHTF8P0CG12 524 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 NPC2P61916 151 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 GAGE2BQ13066 116 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 XAGE1AQ9HD64 81 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 PKD1P98161 4303 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 SNCGO76070 127 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 TLX1NBP0CAT3 122 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 COX17Q14061 63 aa8.64□□□□□ -1.03
PBRM1-219ENST00000462207 C9JAW5 83 aa8.63□□□□□ -1.03
PBRM1-219ENST00000462207 PANO1I0J062 215 aa8.63□□□□□ -1.03
PBRM1-219ENST00000462207 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
PBRM1-219ENST00000462207 TIMM17BO60830 172 aa8.63□□□□□ -1.03
PBRM1-219ENST00000462207 Q6Q795 121 aa8.63□□□□□ -1.03
PBRM1-219ENST00000462207 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
PBRM1-219ENST00000462207 KRTAP10-1P60331 282 aa8.62□□□□□ -1.03
PBRM1-219ENST00000462207 CIRBPQ14011 172 aaKnown RBP8.62□□□□□ -1.03
PBRM1-219ENST00000462207 A4D1N5 150 aa8.62□□□□□ -1.03
PBRM1-219ENST00000462207 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
PBRM1-219ENST00000462207 SOSTDC1Q6X4U4 206 aa8.62□□□□□ -1.03
PBRM1-219ENST00000462207 Q1RN00 199 aa8.61□□□□□ -1.03
PBRM1-219ENST00000462207 C9orf129Q5T035 196 aaKnown RBP8.61□□□□□ -1.03
PBRM1-219ENST00000462207 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
PBRM1-219ENST00000462207 C16orf90A8MZG2 172 aa8.6□□□□□ -1.03
PBRM1-219ENST00000462207 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
PBRM1-219ENST00000462207 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
PBRM1-219ENST00000462207 TRBV10-2A0A0K0K1G8 114 aa8.59□□□□□ -1.03
PBRM1-219ENST00000462207 Q8NDZ9 215 aa8.59□□□□□ -1.03
PBRM1-219ENST00000462207 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
PBRM1-219ENST00000462207 LINC00308Q8TCZ7 52 aa8.58□□□□□ -1.04
PBRM1-219ENST00000462207 FAM30AQ9NZY2 134 aa8.58□□□□□ -1.04
PBRM1-219ENST00000462207 H3BT86 120 aa8.58□□□□□ -1.04
PBRM1-219ENST00000462207 COX6CP09669 75 aa8.58□□□□□ -1.04
PBRM1-219ENST00000462207 MUSTN1Q8IVN3 82 aa8.57□□□□□ -1.04
PBRM1-219ENST00000462207 SPACA4Q8TDM5 124 aa8.57□□□□□ -1.04
PBRM1-219ENST00000462207 IFITM1P13164 125 aa8.56□□□□□ -1.04
PBRM1-219ENST00000462207 NDUFV3P56181 108 aaKnown RBP8.56□□□□□ -1.04
PBRM1-219ENST00000462207 SERTAD4-AS1Q5TG53 156 aa8.56□□□□□ -1.04
PBRM1-219ENST00000462207 PKIGQ9Y2B9 76 aa8.56□□□□□ -1.04
PBRM1-219ENST00000462207 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
PBRM1-219ENST00000462207 HAMPP81172 84 aa8.56□□□□□ -1.04
PBRM1-219ENST00000462207 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
PBRM1-219ENST00000462207 FAM240AA0A1B0GVK7 77 aa8.55□□□□□ -1.04
PBRM1-219ENST00000462207 A0A1W2PNN7 141 aa8.55□□□□□ -1.04
PBRM1-219ENST00000462207 FAM19A5Q7Z5A7 132 aaPredicted RBP8.55□□□□□ -1.04
PBRM1-219ENST00000462207 HECTD4Q9Y4D8 3996 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms