RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TRAV10A0A0B4J240 114 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 TRAV26-2A0A0B4J265 109 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 TRBV7-6A0A0J9YX20 115 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 TEX49A0A1B0GTD5 131 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 LOC389332A0A1B0GUA5 103 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 ZNF815PA8K554 130 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 IGHV3-33P01772 117 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 SPART-AS1P0CW21 52 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 CKS2P33552 79 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 ZNF80P51504 273 aaPredicted RBP4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 FAM222AQ5U5X8 452 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 CD164L2Q6UWJ8 174 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 Q6ZRU5 148 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 MRPL55Q7Z7F7 128 aaKnown RBP4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 LINC00467Q9BRT7 94 aa4.17□□□□□ -1.74
SMARCC1-204ENST00000462198 GNRH2O43555 120 aa4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 DEFB130BP0DP73 79 aa4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 DEFB130AP0DP74 79 aa4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 ATP5EP2Q5VTU8 51 aa4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 Q6JHZ5 121 aa4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 NRACQ8N912 160 aa4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 TMEM243Q9BU79 118 aa4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 NOP10Q9NPE3 64 aaKnown RBP4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 MRPL35Q9NZE8 188 aaKnown RBP4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 CELA1Q9UNI1 258 aa4.16□□□□□ -1.74
SMARCC1-204ENST00000462198 PLAC8L1A1L4L8 177 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 LYRM9A8MSI8 78 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 IGHV3-30P01768 117 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 IGHV3-30-5P0DP03 117 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 DAD1P61803 113 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 DAZ2Q13117 558 aaKnown RBP4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 S100A7L2Q5SY68 101 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 Q6ZTC4 211 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 UBE2DNLQ8IWF7 75 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 SLC25A29Q8N8R3 303 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 C11orf72Q8NBR9 251 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 TTTY13Q9BZ97 58 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 C11orf21Q9P2W6 132 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 HMCN2Q8NDA2 5059 aa4.15□□□□□ -1.75
SMARCC1-204ENST00000462198 TRGV2A0A075B6R0 118 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 TRGV1A0A0A0MS02 117 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 IGKV3D-20A0A0C4DH25 116 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 IGHV3-16A0A0C4DH30 117 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 A0A0J9YY99 117 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 SMKR1H3BMG3 65 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 GAS8-AS1O95177 125 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 HTN3P15516 51 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 S100A4P26447 101 aaKnown RBP4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 Q1RN00 199 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 ORMDL2Q53FV1 153 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 Q6ZTI0 123 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 LINC01561Q8N1V8 128 aa4.14□□□□□ -1.75
SMARCC1-204ENST00000462198 FAT1Q14517 4588 aa4.13□□□□□ -1.75
SMARCC1-204ENST00000462198 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
SMARCC1-204ENST00000462198 DEFB131BA0A096LNP1 70 aa4.13□□□□□ -1.75
SMARCC1-204ENST00000462198 H7C423 109 aa4.13□□□□□ -1.75
SMARCC1-204ENST00000462198 LST1O00453 97 aa4.13□□□□□ -1.75
SMARCC1-204ENST00000462198 SMR3BP02814 79 aaPredicted RBP4.13□□□□□ -1.75
SMARCC1-204ENST00000462198 GATA1P15976 413 aaPredicted RBP4.13□□□□□ -1.75
SMARCC1-204ENST00000462198 LAGE3Q14657 143 aa4.13□□□□□ -1.75
SMARCC1-204ENST00000462198 TOMM6Q96B49 74 aa4.13□□□□□ -1.75
SMARCC1-204ENST00000462198 SDHAF1A6NFY7 115 aa4.12□□□□□ -1.75
SMARCC1-204ENST00000462198 KRTAP29-1A8MX34 341 aaPredicted RBP4.12□□□□□ -1.75
SMARCC1-204ENST00000462198 ZNF876PQ49A33 203 aa4.12□□□□□ -1.75
SMARCC1-204ENST00000462198 C6orf223Q8N319 242 aa4.12□□□□□ -1.75
SMARCC1-204ENST00000462198 LINC00612Q8N6U2 182 aa4.12□□□□□ -1.75
SMARCC1-204ENST00000462198 MPLKIPQ8TAP9 179 aa4.12□□□□□ -1.75
SMARCC1-204ENST00000462198 PHLDA3Q9Y5J5 127 aa4.12□□□□□ -1.75
SMARCC1-204ENST00000462198 TMEM223A0PJW6 202 aa4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 M0R381 172 aa4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 IGHV3-53P01767 116 aa4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 SLPIP03973 132 aa4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 RNASE3P12724 160 aaKnown RBP4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 LGALS3P17931 250 aaKnown RBP4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 C10orf25Q5T742 122 aa4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 SFTA2Q6UW10 78 aa4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 TIMM21Q9BVV7 248 aa4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 SMIM2Q9BVW6 85 aa4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 ICOSQ9Y6W8 199 aa4.11□□□□□ -1.75
SMARCC1-204ENST00000462198 TRGV4A0A0C4DH28 118 aa4.1□□□□□ -1.75
SMARCC1-204ENST00000462198 IGHV1-58A0A0C4DH39 117 aa4.1□□□□□ -1.75
SMARCC1-204ENST00000462198 TRBV10-3A0A0K0K1G6 114 aa4.1□□□□□ -1.75
SMARCC1-204ENST00000462198 C11orf86A6NJI1 115 aa4.1□□□□□ -1.75
SMARCC1-204ENST00000462198 PPP1R17O96001 155 aa4.1□□□□□ -1.75
SMARCC1-204ENST00000462198 ZNF22P17026 224 aaPredicted RBP4.1□□□□□ -1.75
SMARCC1-204ENST00000462198 KLKP1Q107X0 134 aa4.1□□□□□ -1.75
SMARCC1-204ENST00000462198 SPANXN1Q5VSR9 72 aa4.1□□□□□ -1.75
SMARCC1-204ENST00000462198 IGHV3-73A0A0B4J1V6 119 aa4.09□□□□□ -1.75
SMARCC1-204ENST00000462198 FP248Q71RG6 208 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-204ENST00000462198 SCGB3A1Q96QR1 104 aa4.09□□□□□ -1.75
SMARCC1-204ENST00000462198 AMELXQ99217 191 aa4.09□□□□□ -1.75
SMARCC1-204ENST00000462198 IGLV4-69A0A075B6H9 119 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 TRAV7A0A075B6U4 112 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 NBDYA0A0U1RRE5 68 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 IGIPA6NJ69 53 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 TIMM17BO60830 172 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 NXPH4O95158 308 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 DNAL4O96015 105 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 XCL1P47992 114 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms