RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
COL4A6-204ENST00000461897 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
COL4A6-204ENST00000461897 NANOS2P60321 138 aaKnown RBP8.46□□□□□ -1.06
COL4A6-204ENST00000461897 Q6JHZ5 121 aa8.46□□□□□ -1.06
COL4A6-204ENST00000461897 MRAPQ8TCY5 172 aa8.46□□□□□ -1.06
COL4A6-204ENST00000461897 ORMDL1Q9P0S3 153 aa8.46□□□□□ -1.06
COL4A6-204ENST00000461897 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
COL4A6-204ENST00000461897 C14orf132Q9NPU4 83 aa8.45□□□□□ -1.06
COL4A6-204ENST00000461897 UQCRQO14949 82 aa8.45□□□□□ -1.06
COL4A6-204ENST00000461897 C3orf22Q8N5N4 141 aa8.45□□□□□ -1.06
COL4A6-204ENST00000461897 MUC7Q8TAX7 377 aa8.44□□□□□ -1.06
COL4A6-204ENST00000461897 C11orf45Q8TAV5 145 aa8.43□□□□□ -1.06
COL4A6-204ENST00000461897 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
COL4A6-204ENST00000461897 COL7A1Q02388 2944 aa8.42□□□□□ -1.06
COL4A6-204ENST00000461897 JMJD7-PLA2G4BH0Y9G9 81 aa8.42□□□□□ -1.06
COL4A6-204ENST00000461897 H3BNG1 76 aa8.42□□□□□ -1.06
COL4A6-204ENST00000461897 Q8N3U1 123 aa8.42□□□□□ -1.06
COL4A6-204ENST00000461897 CHCHD10Q8WYQ3 142 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-204ENST00000461897 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
COL4A6-204ENST00000461897 ATOX1O00244 68 aa8.41□□□□□ -1.06
COL4A6-204ENST00000461897 NCR3O14931 201 aa8.41□□□□□ -1.06
COL4A6-204ENST00000461897 CCKP06307 115 aa8.41□□□□□ -1.06
COL4A6-204ENST00000461897 LINC00269Q8N2A0 174 aa8.41□□□□□ -1.06
COL4A6-204ENST00000461897 Q8N814 137 aa8.41□□□□□ -1.06
COL4A6-204ENST00000461897 C2orf48Q96LS8 159 aa8.41□□□□□ -1.06
COL4A6-204ENST00000461897 COX7CP15954 63 aa8.4□□□□□ -1.06
COL4A6-204ENST00000461897 LELP1Q5T871 98 aa8.4□□□□□ -1.06
COL4A6-204ENST00000461897 CFAP161Q6P656 301 aa8.4□□□□□ -1.06
COL4A6-204ENST00000461897 SLPIP03973 132 aa8.4□□□□□ -1.07
COL4A6-204ENST00000461897 CLPSL2Q6UWE3 100 aa8.4□□□□□ -1.07
COL4A6-204ENST00000461897 DEFB131BA0A096LNP1 70 aa8.39□□□□□ -1.07
COL4A6-204ENST00000461897 TMEM256-PLSCR3K7ERE1 68 aa8.39□□□□□ -1.07
COL4A6-204ENST00000461897 REG3AQ06141 175 aa8.39□□□□□ -1.07
COL4A6-204ENST00000461897 LYPD5Q6UWN5 251 aa8.39□□□□□ -1.07
COL4A6-204ENST00000461897 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
COL4A6-204ENST00000461897 C9orf153Q5TBE3 101 aa8.38□□□□□ -1.07
COL4A6-204ENST00000461897 PRKDCP78527 4128 aaKnown RBP8.38□□□□□ -1.07
COL4A6-204ENST00000461897 CRYGAP11844 174 aa8.37□□□□□ -1.07
COL4A6-204ENST00000461897 S100A7L2Q5SY68 101 aa8.37□□□□□ -1.07
COL4A6-204ENST00000461897 ANGP03950 147 aaKnown RBP8.36□□□□□ -1.07
COL4A6-204ENST00000461897 PRR3P79522 188 aaKnown RBP8.36□□□□□ -1.07
COL4A6-204ENST00000461897 ATP5EP2Q5VTU8 51 aa8.36□□□□□ -1.07
COL4A6-204ENST00000461897 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
COL4A6-204ENST00000461897 SMIM20Q8N5G0 67 aa8.35□□□□□ -1.07
COL4A6-204ENST00000461897 Q8NDZ9 215 aa8.35□□□□□ -1.07
COL4A6-204ENST00000461897 PRR34Q9NV39 138 aa8.35□□□□□ -1.07
COL4A6-204ENST00000461897 GVQW2A0A096LPI5 108 aaPredicted RBP8.34□□□□□ -1.07
COL4A6-204ENST00000461897 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
COL4A6-204ENST00000461897 IGKV3D-7A0A0C4DH55 119 aa8.34□□□□□ -1.07
COL4A6-204ENST00000461897 ESRGQ1W209 222 aa8.34□□□□□ -1.07
COL4A6-204ENST00000461897 C9orf116Q5BN46 136 aaPredicted RBP8.34□□□□□ -1.07
COL4A6-204ENST00000461897 WFDC10BQ8IUB3 73 aa8.34□□□□□ -1.07
COL4A6-204ENST00000461897 B9D2Q9BPU9 175 aa8.34□□□□□ -1.07
COL4A6-204ENST00000461897 DYNC2H1Q8NCM8 4307 aaKnown RBP8.34□□□□□ -1.08
COL4A6-204ENST00000461897 IGLV10-54A0A075B6I4 117 aa8.33□□□□□ -1.08
COL4A6-204ENST00000461897 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
COL4A6-204ENST00000461897 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
COL4A6-204ENST00000461897 C6orf99Q4VX62 202 aa8.33□□□□□ -1.08
COL4A6-204ENST00000461897 STAB2Q8WWQ8 2551 aa8.33□□□□□ -1.08
COL4A6-204ENST00000461897 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
COL4A6-204ENST00000461897 H3BQ85 93 aa8.32□□□□□ -1.08
COL4A6-204ENST00000461897 C10orf25Q5T742 122 aa8.32□□□□□ -1.08
COL4A6-204ENST00000461897 SERP2Q8N6R1 65 aa8.32□□□□□ -1.08
COL4A6-204ENST00000461897 DNAH1Q9P2D7 4330 aa8.31□□□□□ -1.08
COL4A6-204ENST00000461897 LOC110117498A0A087WWA1 95 aa8.31□□□□□ -1.08
COL4A6-204ENST00000461897 KLK12Q9UKR0 248 aa8.31□□□□□ -1.08
COL4A6-204ENST00000461897 USP17L23D6RBM5 183 aa8.3□□□□□ -1.08
COL4A6-204ENST00000461897 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
COL4A6-204ENST00000461897 ZNF561-AS1K7EIQ3 104 aa8.3□□□□□ -1.08
COL4A6-204ENST00000461897 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
COL4A6-204ENST00000461897 C6orf223Q8N319 242 aa8.3□□□□□ -1.08
COL4A6-204ENST00000461897 MEGF8Q7Z7M0 2845 aa8.29□□□□□ -1.08
COL4A6-204ENST00000461897 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
COL4A6-204ENST00000461897 UPK3BQ9BT76 320 aa8.29□□□□□ -1.08
COL4A6-204ENST00000461897 A0A087WVE0 104 aa8.28□□□□□ -1.08
COL4A6-204ENST00000461897 Q6ZQT0 140 aa8.28□□□□□ -1.08
COL4A6-204ENST00000461897 LYSTQ99698 3801 aa8.27□□□□□ -1.09
COL4A6-204ENST00000461897 RBM3P98179 157 aaKnown RBP8.27□□□□□ -1.09
COL4A6-204ENST00000461897 DNAH7Q8WXX0 4024 aa8.27□□□□□ -1.09
COL4A6-204ENST00000461897 PDE6GP18545 87 aa8.26□□□□□ -1.09
COL4A6-204ENST00000461897 UBL5Q9BZL1 73 aa8.26□□□□□ -1.09
COL4A6-204ENST00000461897 PLECQ15149 4684 aaKnown RBP8.26□□□□□ -1.09
COL4A6-204ENST00000461897 LINC01556Q5JQF7 62 aa8.26□□□□□ -1.09
COL4A6-204ENST00000461897 CSMD3Q7Z407 3707 aa8.25□□□□□ -1.09
COL4A6-204ENST00000461897 TRBV7-6A0A0J9YX20 115 aa8.25□□□□□ -1.09
COL4A6-204ENST00000461897 RPS28P62857 69 aaKnown RBP8.25□□□□□ -1.09
COL4A6-204ENST00000461897 KRTAP21-3Q3LHN1 58 aa8.25□□□□□ -1.09
COL4A6-204ENST00000461897 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
COL4A6-204ENST00000461897 LINC00588Q9Y4M8 146 aa8.25□□□□□ -1.09
COL4A6-204ENST00000461897 BCE1O60756 84 aa8.24□□□□□ -1.09
COL4A6-204ENST00000461897 TMEM258P61165 79 aa8.23□□□□□ -1.09
COL4A6-204ENST00000461897 TRAV23DV6A0A075B6W5 121 aa8.23□□□□□ -1.09
COL4A6-204ENST00000461897 DNAH10OSP0CZ25 163 aa8.23□□□□□ -1.09
COL4A6-204ENST00000461897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.23□□□□□ -1.09
COL4A6-204ENST00000461897 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
COL4A6-204ENST00000461897 DIRC1Q969H9 104 aa8.22□□□□□ -1.09
COL4A6-204ENST00000461897 CYSTM1Q9H1C7 97 aa8.22□□□□□ -1.09
COL4A6-204ENST00000461897 J3KT08 172 aa8.21□□□□□ -1.09
COL4A6-204ENST00000461897 GHRHP01286 108 aa8.21□□□□□ -1.09
COL4A6-204ENST00000461897 KRTAP26-1Q6PEX3 210 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms