RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 HIST1H2BJP06899 126 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 HIST1H2BOP23527 126 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 HIST1H2BBP33778 126 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 HIST1H2BDP58876 126 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 HIST1H2BCP62807 126 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 HIST2H2BEQ16778 126 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.32□□□□□ -0.92
VARS-219ENST00000461328 HIST1H2BHQ93079 126 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 HIST1H2BNQ99877 126 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 HIST1H2BMQ99879 126 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 NDUFA12Q9UI09 145 aa9.32□□□□□ -0.92
VARS-219ENST00000461328 IGKV2-28A0A075B6P5 120 aa9.31□□□□□ -0.92
VARS-219ENST00000461328 ZNF861PO60384 105 aa9.31□□□□□ -0.92
VARS-219ENST00000461328 BCE1O60756 84 aa9.31□□□□□ -0.92
VARS-219ENST00000461328 IGKV2D-28P01615 120 aa9.31□□□□□ -0.92
VARS-219ENST00000461328 IGKCP01834 107 aa9.31□□□□□ -0.92
VARS-219ENST00000461328 VPREB1P12018 145 aa9.31□□□□□ -0.92
VARS-219ENST00000461328 HERV-K104P63124 156 aa9.31□□□□□ -0.92
VARS-219ENST00000461328 MYMXA0A1B0GTQ4 84 aa9.3□□□□□ -0.92
VARS-219ENST00000461328 SMIM13P0DJ93 91 aa9.3□□□□□ -0.92
VARS-219ENST00000461328 RPL28P46779 137 aaKnown RBP9.3□□□□□ -0.92
VARS-219ENST00000461328 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
VARS-219ENST00000461328 UBE2AP49459 152 aa9.29□□□□□ -0.92
VARS-219ENST00000461328 LINC00587B1AMM8 73 aa9.28□□□□□ -0.92
VARS-219ENST00000461328 LEPROTO15243 131 aa9.28□□□□□ -0.92
VARS-219ENST00000461328 PRR26Q8N8Z3 221 aa9.28□□□□□ -0.92
VARS-219ENST00000461328 LGALS3P17931 250 aaKnown RBP9.27□□□□□ -0.93
VARS-219ENST00000461328 TSPEAR-AS2P59090 65 aa9.27□□□□□ -0.93
VARS-219ENST00000461328 J3QQQ9 107 aa9.26□□□□□ -0.93
VARS-219ENST00000461328 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
VARS-219ENST00000461328 IGLV1-50A0A075B6I6 118 aa9.25□□□□□ -0.93
VARS-219ENST00000461328 BOD1L2Q8IYS8 172 aa9.25□□□□□ -0.93
VARS-219ENST00000461328 Q8NDZ9 215 aa9.25□□□□□ -0.93
VARS-219ENST00000461328 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
VARS-219ENST00000461328 KRTAP1-4P0C5Y4 121 aa9.24□□□□□ -0.93
VARS-219ENST00000461328 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
VARS-219ENST00000461328 NMUP48645 174 aa9.23□□□□□ -0.93
VARS-219ENST00000461328 FAM19A1Q7Z5A9 133 aa9.23□□□□□ -0.93
VARS-219ENST00000461328 M0R378 163 aa9.22□□□□□ -0.93
VARS-219ENST00000461328 NCR3O14931 201 aa9.22□□□□□ -0.93
VARS-219ENST00000461328 RPL13AP40429 203 aaKnown RBP9.22□□□□□ -0.93
VARS-219ENST00000461328 TMEM126AQ9H061 195 aa9.22□□□□□ -0.93
VARS-219ENST00000461328 PRLHP81277 87 aa9.21□□□□□ -0.94
VARS-219ENST00000461328 DAND5Q8N907 189 aa9.21□□□□□ -0.94
VARS-219ENST00000461328 PET117Q6UWS5 81 aa9.2□□□□□ -0.94
VARS-219ENST00000461328 MIEN1Q9BRT3 115 aa9.2□□□□□ -0.94
VARS-219ENST00000461328 UBR4Q5T4S7 5183 aa9.2□□□□□ -0.94
VARS-219ENST00000461328 E9PLD3 99 aa9.19□□□□□ -0.94
VARS-219ENST00000461328 KRTDAPP60985 99 aa9.19□□□□□ -0.94
VARS-219ENST00000461328 COA6Q5JTJ3 125 aaKnown RBP9.18□□□□□ -0.94
VARS-219ENST00000461328 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
VARS-219ENST00000461328 KRTAP13-1Q8IUC0 172 aa9.18□□□□□ -0.94
VARS-219ENST00000461328 IGKV2D-26A0A0A0MRZ7 120 aa9.17□□□□□ -0.94
VARS-219ENST00000461328 C3orf79P0CE67 100 aa9.17□□□□□ -0.94
VARS-219ENST00000461328 C20orf202A1L168 122 aa9.16□□□□□ -0.94
VARS-219ENST00000461328 PRYO14603 147 aa9.16□□□□□ -0.94
VARS-219ENST00000461328 S100A1P23297 94 aa9.16□□□□□ -0.94
VARS-219ENST00000461328 S100A12P80511 92 aa9.16□□□□□ -0.94
VARS-219ENST00000461328 CRYGAP11844 174 aa9.15□□□□□ -0.94
VARS-219ENST00000461328 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
VARS-219ENST00000461328 A0A0J9YXY3 114 aa9.14□□□□□ -0.95
VARS-219ENST00000461328 NPC2P61916 151 aa9.14□□□□□ -0.95
VARS-219ENST00000461328 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
VARS-219ENST00000461328 A0A087X002 238 aa9.13□□□□□ -0.95
VARS-219ENST00000461328 TRBV10-3A0A0K0K1G6 114 aa9.13□□□□□ -0.95
VARS-219ENST00000461328 ETDCA0A1B0GVM5 59 aa9.12□□□□□ -0.95
VARS-219ENST00000461328 TYMSOSQ8TAI1 123 aa9.12□□□□□ -0.95
VARS-219ENST00000461328 SPANXB1Q9NS25 103 aaPredicted RBP9.12□□□□□ -0.95
VARS-219ENST00000461328 LOC107984156A0A0G2JMH3 177 aa9.11□□□□□ -0.95
VARS-219ENST00000461328 TRBV10-2A0A0K0K1G8 114 aa9.11□□□□□ -0.95
VARS-219ENST00000461328 ZNF815PA8K554 130 aa9.11□□□□□ -0.95
VARS-219ENST00000461328 DDTP30046 118 aa9.11□□□□□ -0.95
VARS-219ENST00000461328 S100A7L2Q5SY68 101 aa9.11□□□□□ -0.95
VARS-219ENST00000461328 ARL17AQ8IVW1 177 aa9.11□□□□□ -0.95
VARS-219ENST00000461328 LRP2P98164 4655 aa9.11□□□□□ -0.95
VARS-219ENST00000461328 KCNQ1DNQ9H478 68 aa9.1□□□□□ -0.95
VARS-219ENST00000461328 NDUFC2O95298 119 aa9.09□□□□□ -0.95
VARS-219ENST00000461328 FAM229BQ4G0N7 80 aa9.09□□□□□ -0.95
VARS-219ENST00000461328 ADAMTSL4-AS1Q5T5F5 129 aa9.09□□□□□ -0.95
VARS-219ENST00000461328 LINC00337Q8N6G1 96 aa9.09□□□□□ -0.95
VARS-219ENST00000461328 S100A2P29034 98 aa9.08□□□□□ -0.96
VARS-219ENST00000461328 SOSTDC1Q6X4U4 206 aa9.08□□□□□ -0.96
VARS-219ENST00000461328 ATOH7Q8N100 152 aa9.08□□□□□ -0.96
VARS-219ENST00000461328 TTTY13Q9BZ97 58 aa9.08□□□□□ -0.96
VARS-219ENST00000461328 TIMM17BO60830 172 aa9.07□□□□□ -0.96
VARS-219ENST00000461328 SPRR1AP35321 89 aa9.07□□□□□ -0.96
VARS-219ENST00000461328 ZNF706Q9Y5V0 76 aaPredicted RBP9.07□□□□□ -0.96
VARS-219ENST00000461328 TSPAN13O95857 204 aa9.06□□□□□ -0.96
VARS-219ENST00000461328 AKR1D1P51857 326 aa9.06□□□□□ -0.96
VARS-219ENST00000461328 SCGB1D4Q6XE38 83 aa9.06□□□□□ -0.96
VARS-219ENST00000461328 S100A6P06703 90 aa9.05□□□□□ -0.96
VARS-219ENST00000461328 PRR4Q16378 134 aa9.05□□□□□ -0.96
VARS-219ENST00000461328 KRTAP13-2Q52LG2 175 aa9.05□□□□□ -0.96
VARS-219ENST00000461328 TRAV23DV6A0A075B6W5 121 aa9.04□□□□□ -0.96
VARS-219ENST00000461328 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
VARS-219ENST00000461328 HIST3H2BBQ8N257 126 aa9.04□□□□□ -0.96
VARS-219ENST00000461328 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
VARS-219ENST00000461328 SPRR4Q96PI1 79 aa9.04□□□□□ -0.96
VARS-219ENST00000461328 LITAFQ99732 161 aa9.04□□□□□ -0.96
VARS-219ENST00000461328 KRTAP4-16G5E9R7 235 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms