RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CBLN2Q8IUK8 224 aa8.45□□□□□ -1.06
SMPD4-216ENST00000461187 C3orf22Q8N5N4 141 aa8.45□□□□□ -1.06
SMPD4-216ENST00000461187 C18orf32Q8TCD1 76 aa8.45□□□□□ -1.06
SMPD4-216ENST00000461187 CDIP1Q9H305 208 aa8.45□□□□□ -1.06
SMPD4-216ENST00000461187 HBDP02042 147 aa8.44□□□□□ -1.06
SMPD4-216ENST00000461187 PMCHL1Q16048 86 aa8.44□□□□□ -1.06
SMPD4-216ENST00000461187 C10orf91Q5T1B1 145 aa8.43□□□□□ -1.06
SMPD4-216ENST00000461187 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
SMPD4-216ENST00000461187 SFTA2Q6UW10 78 aa8.43□□□□□ -1.06
SMPD4-216ENST00000461187 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
SMPD4-216ENST00000461187 HIGD2AQ9BW72 106 aa8.42□□□□□ -1.06
SMPD4-216ENST00000461187 RPS10P5Q9NQ39 176 aa8.42□□□□□ -1.06
SMPD4-216ENST00000461187 RHEBQ15382 184 aa8.41□□□□□ -1.06
SMPD4-216ENST00000461187 TRAPPC1Q9Y5R8 145 aa8.41□□□□□ -1.06
SMPD4-216ENST00000461187 LINC00158P58513 81 aa8.4□□□□□ -1.06
SMPD4-216ENST00000461187 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
SMPD4-216ENST00000461187 SPRR4Q96PI1 79 aa8.4□□□□□ -1.06
SMPD4-216ENST00000461187 PPDPFQ9H3Y8 114 aa8.4□□□□□ -1.06
SMPD4-216ENST00000461187 SPAG11AQ6PDA7 123 aa8.39□□□□□ -1.07
SMPD4-216ENST00000461187 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
SMPD4-216ENST00000461187 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
SMPD4-216ENST00000461187 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
SMPD4-216ENST00000461187 PRYO14603 147 aa8.35□□□□□ -1.07
SMPD4-216ENST00000461187 SMIM13P0DJ93 91 aa8.35□□□□□ -1.07
SMPD4-216ENST00000461187 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-216ENST00000461187 ZNF706Q9Y5V0 76 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-216ENST00000461187 SPRR1AP35321 89 aa8.34□□□□□ -1.07
SMPD4-216ENST00000461187 BOD1L2Q8IYS8 172 aa8.34□□□□□ -1.07
SMPD4-216ENST00000461187 LINC00337Q8N6G1 96 aa8.34□□□□□ -1.07
SMPD4-216ENST00000461187 KCNQ1DNQ9H478 68 aa8.34□□□□□ -1.07
SMPD4-216ENST00000461187 TRAV12-1A0A0B4J245 112 aa8.33□□□□□ -1.08
SMPD4-216ENST00000461187 KRTAP4-16G5E9R7 235 aaPredicted RBP8.33□□□□□ -1.08
SMPD4-216ENST00000461187 NCR3O14931 201 aa8.33□□□□□ -1.08
SMPD4-216ENST00000461187 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
SMPD4-216ENST00000461187 DAND5Q8N907 189 aa8.33□□□□□ -1.08
SMPD4-216ENST00000461187 Q8NBF4 154 aa8.33□□□□□ -1.08
SMPD4-216ENST00000461187 SMCR5Q8TEV8 140 aa8.33□□□□□ -1.08
SMPD4-216ENST00000461187 ATP6V1G1O75348 118 aa8.32□□□□□ -1.08
SMPD4-216ENST00000461187 MIR7-3HGQ8N6C7 128 aa8.32□□□□□ -1.08
SMPD4-216ENST00000461187 IFI27L1Q96BM0 104 aa8.32□□□□□ -1.08
SMPD4-216ENST00000461187 KRTAP13-3Q3SY46 172 aa8.31□□□□□ -1.08
SMPD4-216ENST00000461187 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
SMPD4-216ENST00000461187 HERV-K104P63124 156 aa8.3□□□□□ -1.08
SMPD4-216ENST00000461187 CHCHD1Q96BP2 118 aaKnown RBP8.3□□□□□ -1.08
SMPD4-216ENST00000461187 TRBV10-3A0A0K0K1G6 114 aa8.29□□□□□ -1.08
SMPD4-216ENST00000461187 ETDCA0A1B0GVM5 59 aa8.29□□□□□ -1.08
SMPD4-216ENST00000461187 SPINK1P00995 79 aa8.29□□□□□ -1.08
SMPD4-216ENST00000461187 LINC00483Q53H64 154 aa8.29□□□□□ -1.08
SMPD4-216ENST00000461187 APOC3P02656 99 aa8.28□□□□□ -1.08
SMPD4-216ENST00000461187 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.09
SMPD4-216ENST00000461187 NDUFA12Q9UI09 145 aa8.27□□□□□ -1.09
SMPD4-216ENST00000461187 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
SMPD4-216ENST00000461187 B5MCH6 92 aa8.26□□□□□ -1.09
SMPD4-216ENST00000461187 YPEL4Q96NS1 127 aa8.26□□□□□ -1.09
SMPD4-216ENST00000461187 KRTAP9-6A0A140TA67 174 aa8.25□□□□□ -1.09
SMPD4-216ENST00000461187 MYMXA0A1B0GTQ4 84 aa8.25□□□□□ -1.09
SMPD4-216ENST00000461187 ERC2-IT1O76042 136 aa8.25□□□□□ -1.09
SMPD4-216ENST00000461187 SNAPINO95295 136 aa8.25□□□□□ -1.09
SMPD4-216ENST00000461187 GAGE2AQ6NT46 116 aa8.25□□□□□ -1.09
SMPD4-216ENST00000461187 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
SMPD4-216ENST00000461187 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
SMPD4-216ENST00000461187 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
SMPD4-216ENST00000461187 SVBPQ8N300 66 aa8.24□□□□□ -1.09
SMPD4-216ENST00000461187 FAM19A2Q8N3H0 131 aa8.24□□□□□ -1.09
SMPD4-216ENST00000461187 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
SMPD4-216ENST00000461187 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
SMPD4-216ENST00000461187 MOBPQ13875 183 aa8.23□□□□□ -1.09
SMPD4-216ENST00000461187 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
SMPD4-216ENST00000461187 DDTP30046 118 aa8.22□□□□□ -1.09
SMPD4-216ENST00000461187 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
SMPD4-216ENST00000461187 S100A12P80511 92 aa8.22□□□□□ -1.09
SMPD4-216ENST00000461187 SSBP3-AS1Q7Z2R9 100 aa8.22□□□□□ -1.09
SMPD4-216ENST00000461187 Q8N377 158 aa8.22□□□□□ -1.09
SMPD4-216ENST00000461187 Q9BRP9 147 aa8.22□□□□□ -1.09
SMPD4-216ENST00000461187 TRBV10-2A0A0K0K1G8 114 aa8.21□□□□□ -1.1
SMPD4-216ENST00000461187 H0Y8G0 127 aa8.21□□□□□ -1.1
SMPD4-216ENST00000461187 LEPROTO15243 131 aa8.21□□□□□ -1.1
SMPD4-216ENST00000461187 HSBP1O75506 76 aa8.21□□□□□ -1.1
SMPD4-216ENST00000461187 NDUFA5Q16718 116 aa8.21□□□□□ -1.1
SMPD4-216ENST00000461187 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
SMPD4-216ENST00000461187 Q6ZRX8 168 aa8.2□□□□□ -1.1
SMPD4-216ENST00000461187 SPANXB1Q9NS25 103 aaPredicted RBP8.18□□□□□ -1.1
SMPD4-216ENST00000461187 J3QQQ9 107 aa8.17□□□□□ -1.1
SMPD4-216ENST00000461187 SLC25A20O43772 301 aa8.17□□□□□ -1.1
SMPD4-216ENST00000461187 IGLV6-57P01721 117 aa8.17□□□□□ -1.1
SMPD4-216ENST00000461187 LINC01547P58512 204 aaPredicted RBP8.17□□□□□ -1.1
SMPD4-216ENST00000461187 LEPROTL1O95214 131 aa8.16□□□□□ -1.1
SMPD4-216ENST00000461187 NDUFC2O95298 119 aa8.16□□□□□ -1.1
SMPD4-216ENST00000461187 PLNP26678 52 aa8.16□□□□□ -1.1
SMPD4-216ENST00000461187 LINC00310P59036 64 aa8.16□□□□□ -1.1
SMPD4-216ENST00000461187 MIEN1Q9BRT3 115 aa8.15□□□□□ -1.1
SMPD4-216ENST00000461187 SERF1AO75920 110 aa8.14□□□□□ -1.11
SMPD4-216ENST00000461187 NMUP48645 174 aa8.14□□□□□ -1.11
SMPD4-216ENST00000461187 S100A7L2Q5SY68 101 aa8.14□□□□□ -1.11
SMPD4-216ENST00000461187 XP32Q5T750 250 aa8.14□□□□□ -1.11
SMPD4-216ENST00000461187 TRAV23DV6A0A075B6W5 121 aa8.13□□□□□ -1.11
SMPD4-216ENST00000461187 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
SMPD4-216ENST00000461187 DPM2O94777 84 aa8.13□□□□□ -1.11
SMPD4-216ENST00000461187 TRGC2P03986 189 aa8.13□□□□□ -1.11
SMPD4-216ENST00000461187 LGALS3P17931 250 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms