RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 RPL24P83731 157 aaKnown RBP14.11□□□□□ -0.15
HOXB3-202ENST00000460160 RPL13AP40429 203 aaKnown RBP14.1□□□□□ -0.15
HOXB3-202ENST00000460160 A0A0U1RRA0 63 aa14.09□□□□□ -0.15
HOXB3-202ENST00000460160 UBE2AP49459 152 aa14.07□□□□□ -0.16
HOXB3-202ENST00000460160 ATP6V1G1O75348 118 aa14.06□□□□□ -0.16
HOXB3-202ENST00000460160 SMIM13P0DJ93 91 aa14.06□□□□□ -0.16
HOXB3-202ENST00000460160 FABP4P15090 132 aa14.06□□□□□ -0.16
HOXB3-202ENST00000460160 HSPB8Q9UJY1 196 aa14.06□□□□□ -0.16
HOXB3-202ENST00000460160 TMEM238C9JI98 176 aa14.05□□□□□ -0.16
HOXB3-202ENST00000460160 TMEM126AQ9H061 195 aa14.05□□□□□ -0.16
HOXB3-202ENST00000460160 NDUFA12Q9UI09 145 aa14.05□□□□□ -0.16
HOXB3-202ENST00000460160 HERV-K104P63124 156 aa14.05□□□□□ -0.16
HOXB3-202ENST00000460160 A0A087X002 238 aa14.04□□□□□ -0.16
HOXB3-202ENST00000460160 PLNP26678 52 aa14.04□□□□□ -0.16
HOXB3-202ENST00000460160 MEIG1Q5JSS6 88 aa14.04□□□□□ -0.16
HOXB3-202ENST00000460160 TSPEAR-AS2P59090 65 aa14.03□□□□□ -0.16
HOXB3-202ENST00000460160 M0R378 163 aa14.02□□□□□ -0.16
HOXB3-202ENST00000460160 S100A1P23297 94 aa14.02□□□□□ -0.16
HOXB3-202ENST00000460160 PRLHP81277 87 aa14.01□□□□□ -0.17
HOXB3-202ENST00000460160 MIR7-3HGQ8N6C7 128 aa14.01□□□□□ -0.17
HOXB3-202ENST00000460160 PMCHL2Q9BQD1 86 aa14.01□□□□□ -0.17
HOXB3-202ENST00000460160 LPAP08519 4548 aa14.01□□□□□ -0.17
HOXB3-202ENST00000460160 MYMXA0A1B0GTQ4 84 aa14□□□□□ -0.17
HOXB3-202ENST00000460160 LEPROTO15243 131 aa14□□□□□ -0.17
HOXB3-202ENST00000460160 DPM2O94777 84 aa14□□□□□ -0.17
HOXB3-202ENST00000460160 RNF213Q63HN8 5207 aa14□□□□□ -0.17
HOXB3-202ENST00000460160 FAM19A1Q7Z5A9 133 aa14□□□□□ -0.17
HOXB3-202ENST00000460160 ANAPC11Q9NYG5 84 aa14□□□□□ -0.17
HOXB3-202ENST00000460160 BOD1L2Q8IYS8 172 aa13.99□□□□□ -0.17
HOXB3-202ENST00000460160 PLEKHB2Q96CS7 222 aa13.99□□□□□ -0.17
HOXB3-202ENST00000460160 CRYGAP11844 174 aa13.98□□□□□ -0.17
HOXB3-202ENST00000460160 LINC00587B1AMM8 73 aa13.97□□□□□ -0.17
HOXB3-202ENST00000460160 IGKCP01834 107 aa13.97□□□□□ -0.17
HOXB3-202ENST00000460160 HIST1H2BKO60814 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST1H2BJP06899 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST1H2BOP23527 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST1H2BBP33778 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST1H2BDP58876 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST1H2BCP62807 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST2H2BEQ16778 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST1H2BHQ93079 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST1H2BNQ99877 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 HIST1H2BMQ99879 126 aa13.96□□□□□ -0.17
HOXB3-202ENST00000460160 J3QQQ9 107 aa13.95□□□□□ -0.18
HOXB3-202ENST00000460160 MAP1LC3CQ9BXW4 147 aa13.95□□□□□ -0.18
HOXB3-202ENST00000460160 HERVK_113P61574 105 aa13.94□□□□□ -0.18
HOXB3-202ENST00000460160 NCR3O14931 201 aa13.93□□□□□ -0.18
HOXB3-202ENST00000460160 KRTAP13-2Q52LG2 175 aa13.93□□□□□ -0.18
HOXB3-202ENST00000460160 TYMSOSQ8TAI1 123 aa13.93□□□□□ -0.18
HOXB3-202ENST00000460160 FAM229BQ4G0N7 80 aa13.92□□□□□ -0.18
HOXB3-202ENST00000460160 DAND5Q8N907 189 aa13.92□□□□□ -0.18
HOXB3-202ENST00000460160 IGKV2D-26A0A0A0MRZ7 120 aa13.9□□□□□ -0.18
HOXB3-202ENST00000460160 NMUP48645 174 aa13.9□□□□□ -0.18
HOXB3-202ENST00000460160 LGALS3P17931 250 aaKnown RBP13.9□□□□□ -0.19
HOXB3-202ENST00000460160 LOC107984156A0A0G2JMH3 177 aa13.89□□□□□ -0.19
HOXB3-202ENST00000460160 PRYO14603 147 aa13.89□□□□□ -0.19
HOXB3-202ENST00000460160 ARL17AQ8IVW1 177 aa13.89□□□□□ -0.19
HOXB3-202ENST00000460160 SYS1-DBNDD2H3BUS1 97 aa13.88□□□□□ -0.19
HOXB3-202ENST00000460160 HIGD2AQ9BW72 106 aa13.88□□□□□ -0.19
HOXB3-202ENST00000460160 TSPAN13O95857 204 aa13.87□□□□□ -0.19
HOXB3-202ENST00000460160 KCNQ1DNQ9H478 68 aa13.87□□□□□ -0.19
HOXB3-202ENST00000460160 TRBV10-3A0A0K0K1G6 114 aa13.86□□□□□ -0.19
HOXB3-202ENST00000460160 SPRR1AP35321 89 aa13.85□□□□□ -0.19
HOXB3-202ENST00000460160 E9PLD3 99 aa13.85□□□□□ -0.19
HOXB3-202ENST00000460160 PRR4Q16378 134 aa13.84□□□□□ -0.19
HOXB3-202ENST00000460160 LINC00337Q8N6G1 96 aa13.84□□□□□ -0.19
HOXB3-202ENST00000460160 KRTAP4-16G5E9R7 235 aaPredicted RBP13.83□□□□□ -0.2
HOXB3-202ENST00000460160 LINC01545Q5VT33 79 aa13.81□□□□□ -0.2
HOXB3-202ENST00000460160 A0A0J9YXY3 114 aa13.8□□□□□ -0.2
HOXB3-202ENST00000460160 TRBV10-2A0A0K0K1G8 114 aa13.8□□□□□ -0.2
HOXB3-202ENST00000460160 SPRR4Q96PI1 79 aa13.8□□□□□ -0.2
HOXB3-202ENST00000460160 MIEN1Q9BRT3 115 aa13.8□□□□□ -0.2
HOXB3-202ENST00000460160 ETDCA0A1B0GVM5 59 aa13.79□□□□□ -0.2
HOXB3-202ENST00000460160 COA6Q5JTJ3 125 aaKnown RBP13.79□□□□□ -0.2
HOXB3-202ENST00000460160 ADAMTSL4-AS1Q5T5F5 129 aa13.79□□□□□ -0.2
HOXB3-202ENST00000460160 PET117Q6UWS5 81 aa13.79□□□□□ -0.2
HOXB3-202ENST00000460160 LINC00304Q8N9R0 145 aa13.79□□□□□ -0.2
HOXB3-202ENST00000460160 SPANXB1Q9NS25 103 aaPredicted RBP13.79□□□□□ -0.2
HOXB3-202ENST00000460160 EIF4EBP3O60516 100 aaPredicted RBP13.77□□□□□ -0.21
HOXB3-202ENST00000460160 DDTP30046 118 aa13.77□□□□□ -0.21
HOXB3-202ENST00000460160 SOSTDC1Q6X4U4 206 aa13.77□□□□□ -0.21
HOXB3-202ENST00000460160 C3orf22Q8N5N4 141 aa13.77□□□□□ -0.21
HOXB3-202ENST00000460160 NDUFC2O95298 119 aa13.76□□□□□ -0.21
HOXB3-202ENST00000460160 C3orf79P0CE67 100 aa13.75□□□□□ -0.21
HOXB3-202ENST00000460160 NPC2P61916 151 aa13.74□□□□□ -0.21
HOXB3-202ENST00000460160 S100A12P80511 92 aa13.74□□□□□ -0.21
HOXB3-202ENST00000460160 SMCR5Q8TEV8 140 aa13.74□□□□□ -0.21
HOXB3-202ENST00000460160 ZNF706Q9Y5V0 76 aaPredicted RBP13.74□□□□□ -0.21
HOXB3-202ENST00000460160 B5MCH6 92 aa13.73□□□□□ -0.21
HOXB3-202ENST00000460160 IGLV6-57P01721 117 aa13.73□□□□□ -0.21
HOXB3-202ENST00000460160 LITAFQ99732 161 aa13.72□□□□□ -0.21
HOXB3-202ENST00000460160 KRTDAPP60985 99 aa13.69□□□□□ -0.22
HOXB3-202ENST00000460160 S100A7L2Q5SY68 101 aa13.69□□□□□ -0.22
HOXB3-202ENST00000460160 TTTY13Q9BZ97 58 aa13.69□□□□□ -0.22
HOXB3-202ENST00000460160 PPDPFQ9H3Y8 114 aa13.68□□□□□ -0.22
HOXB3-202ENST00000460160 ZNF815PA8K554 130 aa13.67□□□□□ -0.22
HOXB3-202ENST00000460160 TIMM17BO60830 172 aa13.67□□□□□ -0.22
HOXB3-202ENST00000460160 Q6ZRX8 168 aa13.67□□□□□ -0.22
HOXB3-202ENST00000460160 RETNLBQ9BQ08 111 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms