RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 LINC01561Q8N1V8 128 aa12.25□□□□□ -0.45
HPS3-202ENST00000460120 TENM3Q9P273 2699 aa12.25□□□□□ -0.45
HPS3-202ENST00000460120 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
HPS3-202ENST00000460120 ANK2Q01484 3957 aa12.24□□□□□ -0.45
HPS3-202ENST00000460120 COX17Q14061 63 aa12.24□□□□□ -0.45
HPS3-202ENST00000460120 FBN1P35555 2871 aaKnown RBP12.24□□□□□ -0.45
HPS3-202ENST00000460120 KPRPQ5T749 579 aaPredicted RBP12.24□□□□□ -0.45
HPS3-202ENST00000460120 LINC00643Q86TS7 51 aa12.24□□□□□ -0.45
HPS3-202ENST00000460120 IGKV3D-7A0A0C4DH55 119 aa12.23□□□□□ -0.45
HPS3-202ENST00000460120 TRBV7-7A0A0K0K1E9 115 aa12.23□□□□□ -0.45
HPS3-202ENST00000460120 SDIM1Q6ZPB5 146 aa12.23□□□□□ -0.45
HPS3-202ENST00000460120 Q8N814 137 aa12.23□□□□□ -0.45
HPS3-202ENST00000460120 LINC00846Q9NV44 126 aa12.22□□□□□ -0.45
HPS3-202ENST00000460120 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
HPS3-202ENST00000460120 PRR34Q9NV39 138 aa12.21□□□□□ -0.46
HPS3-202ENST00000460120 NDUFC2O95298 119 aa12.2□□□□□ -0.46
HPS3-202ENST00000460120 MAST4O15021 2626 aa12.2□□□□□ -0.46
HPS3-202ENST00000460120 C6orf48Q9UBA6 75 aa12.2□□□□□ -0.46
HPS3-202ENST00000460120 NOTCH1P46531 2555 aa12.19□□□□□ -0.46
HPS3-202ENST00000460120 FAM19A5Q7Z5A7 132 aaPredicted RBP12.17□□□□□ -0.46
HPS3-202ENST00000460120 PRB2P02812 416 aaPredicted RBP12.17□□□□□ -0.46
HPS3-202ENST00000460120 A0A0J9YWU9 116 aa12.17□□□□□ -0.46
HPS3-202ENST00000460120 ZNF561-AS1K7EIQ3 104 aa12.16□□□□□ -0.46
HPS3-202ENST00000460120 OBSCN-AS1Q96MR7 158 aa12.15□□□□□ -0.46
HPS3-202ENST00000460120 CAMK2N2Q96S95 79 aa12.15□□□□□ -0.46
HPS3-202ENST00000460120 ESRGQ1W209 222 aa12.15□□□□□ -0.47
HPS3-202ENST00000460120 KRTAP24-1Q3LI83 254 aa12.15□□□□□ -0.47
HPS3-202ENST00000460120 TRBV10-3A0A0K0K1G6 114 aa12.14□□□□□ -0.47
HPS3-202ENST00000460120 A0A087WVE0 104 aa12.14□□□□□ -0.47
HPS3-202ENST00000460120 WIPF1O43516 503 aa12.12□□□□□ -0.47
HPS3-202ENST00000460120 LINC00575Q6W349 94 aa12.12□□□□□ -0.47
HPS3-202ENST00000460120 TMEM256-PLSCR3K7ERE1 68 aa12.11□□□□□ -0.47
HPS3-202ENST00000460120 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
HPS3-202ENST00000460120 hADV29S1A0JD25 119 aa12.11□□□□□ -0.47
HPS3-202ENST00000460120 C9orf153Q5TBE3 101 aa12.11□□□□□ -0.47
HPS3-202ENST00000460120 LAMTOR3Q9UHA4 124 aa12.11□□□□□ -0.47
HPS3-202ENST00000460120 Q6ZRU5 148 aa12.1□□□□□ -0.47
HPS3-202ENST00000460120 LINC00167Q96N53 147 aa12.1□□□□□ -0.47
HPS3-202ENST00000460120 IMUPQ9GZP8 106 aa12.1□□□□□ -0.47
HPS3-202ENST00000460120 DEFB131BA0A096LNP1 70 aa12.09□□□□□ -0.47
HPS3-202ENST00000460120 Q6ZQY7 126 aa12.09□□□□□ -0.47
HPS3-202ENST00000460120 CCKP06307 115 aa12.09□□□□□ -0.47
HPS3-202ENST00000460120 IGLV6-57P01721 117 aa12.08□□□□□ -0.48
HPS3-202ENST00000460120 HIST1H4AP62805 103 aaKnown RBP12.08□□□□□ -0.48
HPS3-202ENST00000460120 TRAV23DV6A0A075B6W5 121 aa12.07□□□□□ -0.48
HPS3-202ENST00000460120 C11orf45Q8TAV5 145 aa12.07□□□□□ -0.48
HPS3-202ENST00000460120 J3KT08 172 aa12.06□□□□□ -0.48
HPS3-202ENST00000460120 C15orf56Q8N910 161 aa12.06□□□□□ -0.48
HPS3-202ENST00000460120 JMJD7-PLA2G4BH0Y9G9 81 aa12.06□□□□□ -0.48
HPS3-202ENST00000460120 C1orf43Q9BWL3 253 aa12.06□□□□□ -0.48
HPS3-202ENST00000460120 A0A1B0GX51 115 aa12.05□□□□□ -0.48
HPS3-202ENST00000460120 MRAPQ8TCY5 172 aa12.05□□□□□ -0.48
HPS3-202ENST00000460120 M0R2N4 97 aa12.04□□□□□ -0.48
HPS3-202ENST00000460120 C3orf22Q8N5N4 141 aa12.04□□□□□ -0.48
HPS3-202ENST00000460120 KRTAP26-1Q6PEX3 210 aa12.04□□□□□ -0.48
HPS3-202ENST00000460120 DIRC1Q969H9 104 aa12.04□□□□□ -0.48
HPS3-202ENST00000460120 GVQW2A0A096LPI5 108 aaPredicted RBP12.02□□□□□ -0.48
HPS3-202ENST00000460120 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.48
HPS3-202ENST00000460120 COL6A5A8TX70 2615 aa12.02□□□□□ -0.48
HPS3-202ENST00000460120 CMYA5Q8N3K9 4069 aa12.02□□□□□ -0.49
HPS3-202ENST00000460120 RBM3P98179 157 aaKnown RBP12.02□□□□□ -0.49
HPS3-202ENST00000460120 Q6JHZ5 121 aa12.02□□□□□ -0.49
HPS3-202ENST00000460120 VPREB1P12018 145 aa12□□□□□ -0.49
HPS3-202ENST00000460120 Q6ZRP5 223 aa12□□□□□ -0.49
HPS3-202ENST00000460120 COX7BP24311 80 aa11.99□□□□□ -0.49
HPS3-202ENST00000460120 EGFEM1PQ0D2K5 195 aa11.99□□□□□ -0.49
HPS3-202ENST00000460120 H3BNG1 76 aa11.98□□□□□ -0.49
HPS3-202ENST00000460120 NBEAL1Q6ZS30 2694 aa11.98□□□□□ -0.49
HPS3-202ENST00000460120 FAM19A1Q7Z5A9 133 aa11.98□□□□□ -0.49
HPS3-202ENST00000460120 UQCRQO14949 82 aa11.97□□□□□ -0.49
HPS3-202ENST00000460120 MUC7Q8TAX7 377 aa11.97□□□□□ -0.49
HPS3-202ENST00000460120 NDUFC2-KCTD14E9PQ53 114 aa11.96□□□□□ -0.49
HPS3-202ENST00000460120 C4orf26Q17RF5 130 aa11.96□□□□□ -0.49
HPS3-202ENST00000460120 Q6ZQT0 140 aa11.95□□□□□ -0.5
HPS3-202ENST00000460120 CASC10Q5T4H9 136 aa11.95□□□□□ -0.5
HPS3-202ENST00000460120 DSCR8Q96T75 97 aa11.95□□□□□ -0.5
HPS3-202ENST00000460120 UBL5Q9BZL1 73 aa11.95□□□□□ -0.5
HPS3-202ENST00000460120 CYSTM1Q9H1C7 97 aa11.95□□□□□ -0.5
HPS3-202ENST00000460120 SYCNQ0VAF6 134 aa11.94□□□□□ -0.5
HPS3-202ENST00000460120 LINC01556Q5JQF7 62 aa11.94□□□□□ -0.5
HPS3-202ENST00000460120 M0R378 163 aa11.93□□□□□ -0.5
HPS3-202ENST00000460120 HRCT1Q6UXD1 115 aa11.93□□□□□ -0.5
HPS3-202ENST00000460120 USP17L23D6RBM5 183 aa11.92□□□□□ -0.5
HPS3-202ENST00000460120 HAMPP81172 84 aa11.92□□□□□ -0.5
HPS3-202ENST00000460120 ATOX1O00244 68 aa11.92□□□□□ -0.5
HPS3-202ENST00000460120 ELOF1P60002 83 aaKnown RBP11.92□□□□□ -0.5
HPS3-202ENST00000460120 C2orf48Q96LS8 159 aa11.92□□□□□ -0.5
HPS3-202ENST00000460120 OXTP01178 125 aa11.91□□□□□ -0.5
HPS3-202ENST00000460120 SERTAD4-AS1Q5TG53 156 aa11.91□□□□□ -0.5
HPS3-202ENST00000460120 COX7CP15954 63 aa11.9□□□□□ -0.5
HPS3-202ENST00000460120 RPS28P62857 69 aaKnown RBP11.9□□□□□ -0.5
HPS3-202ENST00000460120 DEFB105AQ8NG35 78 aa11.9□□□□□ -0.5
HPS3-202ENST00000460120 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.5
HPS3-202ENST00000460120 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.5
HPS3-202ENST00000460120 RPL37AP8A6NKH3 93 aa11.89□□□□□ -0.51
HPS3-202ENST00000460120 SCXQ7RTU7 201 aa11.89□□□□□ -0.51
HPS3-202ENST00000460120 FAM168BA1KXE4 195 aa11.88□□□□□ -0.51
HPS3-202ENST00000460120 NKAPP1Q8N9T2 125 aa11.88□□□□□ -0.51
HPS3-202ENST00000460120 UPK3BQ9BT76 320 aa11.88□□□□□ -0.51
HPS3-202ENST00000460120 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms