RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 FABP9Q0Z7S8 132 aa12.26□□□□□ -0.45
PDE6B-203ENST00000460119 COX17Q14061 63 aa12.26□□□□□ -0.45
PDE6B-203ENST00000460119 C4orf48Q5BLP8 95 aa12.26□□□□□ -0.45
PDE6B-203ENST00000460119 Q8NBF4 154 aa12.26□□□□□ -0.45
PDE6B-203ENST00000460119 TRAV9-1A0A075B6T8 112 aa12.25□□□□□ -0.45
PDE6B-203ENST00000460119 LINC00158P58513 81 aa12.24□□□□□ -0.45
PDE6B-203ENST00000460119 FP248Q71RG6 208 aaPredicted RBP12.24□□□□□ -0.45
PDE6B-203ENST00000460119 URB1-AS1Q96HZ7 61 aa12.24□□□□□ -0.45
PDE6B-203ENST00000460119 C11orf86A6NJI1 115 aa12.23□□□□□ -0.45
PDE6B-203ENST00000460119 PMCHL1Q16048 86 aa12.23□□□□□ -0.45
PDE6B-203ENST00000460119 ASB16-AS1Q495Z4 193 aa12.23□□□□□ -0.45
PDE6B-203ENST00000460119 TMEM170BQ5T4T1 132 aa12.22□□□□□ -0.45
PDE6B-203ENST00000460119 TMEM218A2RU14 115 aa12.21□□□□□ -0.45
PDE6B-203ENST00000460119 BAGE3Q86Y29 109 aa12.21□□□□□ -0.45
PDE6B-203ENST00000460119 SMCR5Q8TEV8 140 aa12.21□□□□□ -0.45
PDE6B-203ENST00000460119 S100PP25815 95 aa12.2□□□□□ -0.46
PDE6B-203ENST00000460119 LINC01547P58512 204 aaPredicted RBP12.2□□□□□ -0.46
PDE6B-203ENST00000460119 CLLU1Q5K131 121 aa12.17□□□□□ -0.46
PDE6B-203ENST00000460119 ZNF706Q9Y5V0 76 aaPredicted RBP12.17□□□□□ -0.46
PDE6B-203ENST00000460119 LINC00614P0C842 121 aa12.16□□□□□ -0.46
PDE6B-203ENST00000460119 NCR3O14931 201 aa12.15□□□□□ -0.46
PDE6B-203ENST00000460119 SMIM13P0DJ93 91 aa12.15□□□□□ -0.46
PDE6B-203ENST00000460119 HBDP02042 147 aa12.14□□□□□ -0.47
PDE6B-203ENST00000460119 COX19Q49B96 90 aa12.14□□□□□ -0.47
PDE6B-203ENST00000460119 LCE2DQ5TA82 110 aaPredicted RBP12.14□□□□□ -0.47
PDE6B-203ENST00000460119 BOD1L2Q8IYS8 172 aa12.14□□□□□ -0.47
PDE6B-203ENST00000460119 C18orf32Q8TCD1 76 aa12.14□□□□□ -0.47
PDE6B-203ENST00000460119 SPINK1P00995 79 aa12.13□□□□□ -0.47
PDE6B-203ENST00000460119 GAGE2AQ6NT46 116 aa12.13□□□□□ -0.47
PDE6B-203ENST00000460119 KRTAP4-16G5E9R7 235 aaPredicted RBP12.12□□□□□ -0.47
PDE6B-203ENST00000460119 PRYO14603 147 aa12.12□□□□□ -0.47
PDE6B-203ENST00000460119 SPRR1AP35321 89 aa12.12□□□□□ -0.47
PDE6B-203ENST00000460119 SFTA2Q6UW10 78 aa12.12□□□□□ -0.47
PDE6B-203ENST00000460119 SEC11CQ9BY50 192 aa12.12□□□□□ -0.47
PDE6B-203ENST00000460119 SEC61BP60468 96 aaKnown RBP12.11□□□□□ -0.47
PDE6B-203ENST00000460119 UQCC3Q6UW78 93 aa12.11□□□□□ -0.47
PDE6B-203ENST00000460119 KCNQ1DNQ9H478 68 aa12.11□□□□□ -0.47
PDE6B-203ENST00000460119 CHTOPQ9Y3Y2 248 aaKnown RBP12.11□□□□□ -0.47
PDE6B-203ENST00000460119 IGLV9-49A0A0B4J1Y8 123 aa12.09□□□□□ -0.47
PDE6B-203ENST00000460119 TRBV10-3A0A0K0K1G6 114 aa12.09□□□□□ -0.47
PDE6B-203ENST00000460119 ETDCA0A1B0GVM5 59 aa12.09□□□□□ -0.47
PDE6B-203ENST00000460119 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
PDE6B-203ENST00000460119 ATP6V1G1O75348 118 aa12.09□□□□□ -0.47
PDE6B-203ENST00000460119 ERC2-IT1O76042 136 aa12.09□□□□□ -0.47
PDE6B-203ENST00000460119 MOBPQ13875 183 aa12.08□□□□□ -0.48
PDE6B-203ENST00000460119 LINC00483Q53H64 154 aa12.08□□□□□ -0.48
PDE6B-203ENST00000460119 MIR7-3HGQ8N6C7 128 aa12.08□□□□□ -0.48
PDE6B-203ENST00000460119 TRAPPC1Q9Y5R8 145 aa12.08□□□□□ -0.48
PDE6B-203ENST00000460119 MEIG1Q5JSS6 88 aa12.07□□□□□ -0.48
PDE6B-203ENST00000460119 RPS10P5Q9NQ39 176 aa12.07□□□□□ -0.48
PDE6B-203ENST00000460119 Q8N377 158 aa12.06□□□□□ -0.48
PDE6B-203ENST00000460119 CRCT1Q9UGL9 99 aa12.05□□□□□ -0.48
PDE6B-203ENST00000460119 B5MCH6 92 aa12.04□□□□□ -0.48
PDE6B-203ENST00000460119 LCE2CQ5TA81 110 aa12.03□□□□□ -0.48
PDE6B-203ENST00000460119 IFITM2Q01629 132 aa12.02□□□□□ -0.49
PDE6B-203ENST00000460119 SSBP3-AS1Q7Z2R9 100 aa12.02□□□□□ -0.49
PDE6B-203ENST00000460119 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
PDE6B-203ENST00000460119 XP32Q5T750 250 aa11.99□□□□□ -0.49
PDE6B-203ENST00000460119 Q9BRP9 147 aa11.99□□□□□ -0.49
PDE6B-203ENST00000460119 SLC25A20O43772 301 aa11.98□□□□□ -0.49
PDE6B-203ENST00000460119 C10orf91Q5T1B1 145 aa11.98□□□□□ -0.49
PDE6B-203ENST00000460119 IFI27L1Q96BM0 104 aa11.98□□□□□ -0.49
PDE6B-203ENST00000460119 FSIP2Q5CZC0 6907 aa11.97□□□□□ -0.49
PDE6B-203ENST00000460119 TRAV12-1A0A0B4J245 112 aa11.97□□□□□ -0.49
PDE6B-203ENST00000460119 RHEBQ15382 184 aa11.97□□□□□ -0.49
PDE6B-203ENST00000460119 COMMD7Q86VX2 200 aa11.97□□□□□ -0.49
PDE6B-203ENST00000460119 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
PDE6B-203ENST00000460119 HERV-K104P63124 156 aa11.96□□□□□ -0.49
PDE6B-203ENST00000460119 DDTP30046 118 aa11.95□□□□□ -0.5
PDE6B-203ENST00000460119 KRTAP19-2Q3LHN2 52 aa11.94□□□□□ -0.5
PDE6B-203ENST00000460119 FAM19A2Q8N3H0 131 aa11.94□□□□□ -0.5
PDE6B-203ENST00000460119 MYMXA0A1B0GTQ4 84 aa11.92□□□□□ -0.5
PDE6B-203ENST00000460119 TSPEAR-AS2P59090 65 aa11.92□□□□□ -0.5
PDE6B-203ENST00000460119 S100A12P80511 92 aa11.92□□□□□ -0.5
PDE6B-203ENST00000460119 LINC00587B1AMM8 73 aa11.91□□□□□ -0.5
PDE6B-203ENST00000460119 C9orf153Q5TBE3 101 aa11.91□□□□□ -0.5
PDE6B-203ENST00000460119 Q6ZRX8 168 aa11.91□□□□□ -0.5
PDE6B-203ENST00000460119 MAP1LC3CQ9BXW4 147 aa11.91□□□□□ -0.5
PDE6B-203ENST00000460119 ST20-AS1Q8NBB2 130 aa11.9□□□□□ -0.5
PDE6B-203ENST00000460119 LOC107984156A0A0G2JMH3 177 aa11.88□□□□□ -0.51
PDE6B-203ENST00000460119 H0Y8G0 127 aa11.88□□□□□ -0.51
PDE6B-203ENST00000460119 ARL17AQ8IVW1 177 aa11.88□□□□□ -0.51
PDE6B-203ENST00000460119 CHCHD1Q96BP2 118 aaKnown RBP11.88□□□□□ -0.51
PDE6B-203ENST00000460119 TRBV10-2A0A0K0K1G8 114 aa11.87□□□□□ -0.51
PDE6B-203ENST00000460119 MT1HP80294 61 aa11.87□□□□□ -0.51
PDE6B-203ENST00000460119 PCOTHQ58A44 107 aa11.87□□□□□ -0.51
PDE6B-203ENST00000460119 LEPROTO15243 131 aa11.84□□□□□ -0.51
PDE6B-203ENST00000460119 IGLV6-57P01721 117 aa11.84□□□□□ -0.51
PDE6B-203ENST00000460119 S100A7L2Q5SY68 101 aa11.84□□□□□ -0.51
PDE6B-203ENST00000460119 HRCT1Q6UXD1 115 aa11.84□□□□□ -0.51
PDE6B-203ENST00000460119 IGLV8-61A0A075B6I0 122 aa11.83□□□□□ -0.52
PDE6B-203ENST00000460119 EIF4EBP3O60516 100 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-203ENST00000460119 SPANXB1Q9NS25 103 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-203ENST00000460119 C9orf92A6NGG3 77 aa11.82□□□□□ -0.52
PDE6B-203ENST00000460119 APOC3P02656 99 aa11.82□□□□□ -0.52
PDE6B-203ENST00000460119 NPC2P61916 151 aa11.81□□□□□ -0.52
PDE6B-203ENST00000460119 TRAV23DV6A0A075B6W5 121 aa11.8□□□□□ -0.52
PDE6B-203ENST00000460119 SOSTDC1Q6X4U4 206 aa11.8□□□□□ -0.52
PDE6B-203ENST00000460119 J3QQQ9 107 aa11.79□□□□□ -0.52
PDE6B-203ENST00000460119 HSBP1O75506 76 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms