RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 IGLV5-37A0A075B6J1 123 aa12.49□□□□□ -0.41
SRM-202ENST00000459997 RPL28P46779 137 aaKnown RBP12.49□□□□□ -0.41
SRM-202ENST00000459997 NKAPP1Q8N9T2 125 aa12.49□□□□□ -0.41
SRM-202ENST00000459997 ZNF625Q96I27 306 aaPredicted RBP12.49□□□□□ -0.41
SRM-202ENST00000459997 HSPB8Q9UJY1 196 aa12.48□□□□□ -0.41
SRM-202ENST00000459997 PMCHL2Q9BQD1 86 aa12.45□□□□□ -0.42
SRM-202ENST00000459997 ERG28Q9UKR5 140 aa12.45□□□□□ -0.42
SRM-202ENST00000459997 SND1-IT1Q9HBX3 110 aa12.43□□□□□ -0.42
SRM-202ENST00000459997 COX17Q14061 63 aa12.42□□□□□ -0.42
SRM-202ENST00000459997 RNF213Q63HN8 5207 aa12.42□□□□□ -0.42
SRM-202ENST00000459997 IGKV2-28A0A075B6P5 120 aa12.41□□□□□ -0.42
SRM-202ENST00000459997 IGKV2D-28P01615 120 aa12.41□□□□□ -0.42
SRM-202ENST00000459997 SFTA2Q6UW10 78 aa12.41□□□□□ -0.42
SRM-202ENST00000459997 UBE2AP49459 152 aa12.4□□□□□ -0.42
SRM-202ENST00000459997 DPM2O94777 84 aa12.39□□□□□ -0.43
SRM-202ENST00000459997 VPREB1P12018 145 aa12.39□□□□□ -0.43
SRM-202ENST00000459997 PLNP26678 52 aa12.39□□□□□ -0.43
SRM-202ENST00000459997 MAP1LC3CQ9BXW4 147 aa12.39□□□□□ -0.43
SRM-202ENST00000459997 TSPEAR-AS2P59090 65 aa12.38□□□□□ -0.43
SRM-202ENST00000459997 KRTAP13-1Q8IUC0 172 aa12.38□□□□□ -0.43
SRM-202ENST00000459997 A0A087X002 238 aa12.37□□□□□ -0.43
SRM-202ENST00000459997 A0A0U1RRA0 63 aa12.37□□□□□ -0.43
SRM-202ENST00000459997 RPL24P83731 157 aaKnown RBP12.37□□□□□ -0.43
SRM-202ENST00000459997 ATP6V1G1O75348 118 aa12.36□□□□□ -0.43
SRM-202ENST00000459997 IGKCP01834 107 aa12.36□□□□□ -0.43
SRM-202ENST00000459997 LINC00158P58513 81 aa12.36□□□□□ -0.43
SRM-202ENST00000459997 Q8NDZ9 215 aa12.36□□□□□ -0.43
SRM-202ENST00000459997 LPAP08519 4548 aa12.35□□□□□ -0.43
SRM-202ENST00000459997 CRYGAP11844 174 aa12.35□□□□□ -0.43
SRM-202ENST00000459997 NDUFA12Q9UI09 145 aa12.35□□□□□ -0.43
SRM-202ENST00000459997 SYS1-DBNDD2H3BUS1 97 aa12.34□□□□□ -0.43
SRM-202ENST00000459997 LEPROTO15243 131 aa12.34□□□□□ -0.43
SRM-202ENST00000459997 SMIM13P0DJ93 91 aa12.34□□□□□ -0.43
SRM-202ENST00000459997 S100A1P23297 94 aa12.34□□□□□ -0.43
SRM-202ENST00000459997 COA6Q5JTJ3 125 aaKnown RBP12.34□□□□□ -0.43
SRM-202ENST00000459997 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
SRM-202ENST00000459997 PRR4Q16378 134 aa12.33□□□□□ -0.44
SRM-202ENST00000459997 TYMSOSQ8TAI1 123 aa12.33□□□□□ -0.44
SRM-202ENST00000459997 TMEM126AQ9H061 195 aa12.33□□□□□ -0.44
SRM-202ENST00000459997 ANAPC11Q9NYG5 84 aa12.33□□□□□ -0.44
SRM-202ENST00000459997 PRLHP81277 87 aa12.32□□□□□ -0.44
SRM-202ENST00000459997 MEIG1Q5JSS6 88 aa12.32□□□□□ -0.44
SRM-202ENST00000459997 FAM19A1Q7Z5A9 133 aa12.32□□□□□ -0.44
SRM-202ENST00000459997 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
SRM-202ENST00000459997 TSPAN13O95857 204 aa12.31□□□□□ -0.44
SRM-202ENST00000459997 HERV-K104P63124 156 aa12.31□□□□□ -0.44
SRM-202ENST00000459997 MYMXA0A1B0GTQ4 84 aa12.3□□□□□ -0.44
SRM-202ENST00000459997 J3QQQ9 107 aa12.3□□□□□ -0.44
SRM-202ENST00000459997 HERVK_113P61574 105 aa12.3□□□□□ -0.44
SRM-202ENST00000459997 M0R378 163 aa12.29□□□□□ -0.44
SRM-202ENST00000459997 LINC01545Q5VT33 79 aa12.29□□□□□ -0.44
SRM-202ENST00000459997 C3orf79P0CE67 100 aa12.28□□□□□ -0.44
SRM-202ENST00000459997 MIR7-3HGQ8N6C7 128 aa12.28□□□□□ -0.44
SRM-202ENST00000459997 FAM229BQ4G0N7 80 aa12.27□□□□□ -0.45
SRM-202ENST00000459997 KRTAP13-2Q52LG2 175 aa12.27□□□□□ -0.45
SRM-202ENST00000459997 PET117Q6UWS5 81 aa12.27□□□□□ -0.45
SRM-202ENST00000459997 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
SRM-202ENST00000459997 KRTDAPP60985 99 aa12.25□□□□□ -0.45
SRM-202ENST00000459997 E9PLD3 99 aa12.24□□□□□ -0.45
SRM-202ENST00000459997 DAND5Q8N907 189 aa12.24□□□□□ -0.45
SRM-202ENST00000459997 NMUP48645 174 aa12.23□□□□□ -0.45
SRM-202ENST00000459997 BOD1L2Q8IYS8 172 aa12.23□□□□□ -0.45
SRM-202ENST00000459997 LINC00587B1AMM8 73 aa12.22□□□□□ -0.45
SRM-202ENST00000459997 IGKV2D-26A0A0A0MRZ7 120 aa12.21□□□□□ -0.45
SRM-202ENST00000459997 HIGD2AQ9BW72 106 aa12.2□□□□□ -0.46
SRM-202ENST00000459997 NCR3O14931 201 aa12.19□□□□□ -0.46
SRM-202ENST00000459997 LINC00304Q8N9R0 145 aa12.19□□□□□ -0.46
SRM-202ENST00000459997 A0A0J9YXY3 114 aa12.18□□□□□ -0.46
SRM-202ENST00000459997 PRYO14603 147 aa12.16□□□□□ -0.46
SRM-202ENST00000459997 ADAMTSL4-AS1Q5T5F5 129 aa12.15□□□□□ -0.46
SRM-202ENST00000459997 HIST3H2BBQ8N257 126 aa12.15□□□□□ -0.46
SRM-202ENST00000459997 TTTY13Q9BZ97 58 aa12.15□□□□□ -0.46
SRM-202ENST00000459997 LOC107984156A0A0G2JMH3 177 aa12.14□□□□□ -0.47
SRM-202ENST00000459997 ARL17AQ8IVW1 177 aa12.14□□□□□ -0.47
SRM-202ENST00000459997 ATOH7Q8N100 152 aa12.14□□□□□ -0.47
SRM-202ENST00000459997 EIF4EBP3O60516 100 aaPredicted RBP12.13□□□□□ -0.47
SRM-202ENST00000459997 C20orf202A1L168 122 aa12.12□□□□□ -0.47
SRM-202ENST00000459997 NPC2P61916 151 aa12.12□□□□□ -0.47
SRM-202ENST00000459997 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
SRM-202ENST00000459997 C3orf22Q8N5N4 141 aa12.12□□□□□ -0.47
SRM-202ENST00000459997 SPRR4Q96PI1 79 aa12.12□□□□□ -0.47
SRM-202ENST00000459997 RETNLBQ9BQ08 111 aa12.12□□□□□ -0.47
SRM-202ENST00000459997 KCNQ1DNQ9H478 68 aa12.12□□□□□ -0.47
SRM-202ENST00000459997 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
SRM-202ENST00000459997 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
SRM-202ENST00000459997 TRBV10-3A0A0K0K1G6 114 aa12.1□□□□□ -0.47
SRM-202ENST00000459997 ZNF815PA8K554 130 aa12.1□□□□□ -0.47
SRM-202ENST00000459997 SPRR1AP35321 89 aa12.1□□□□□ -0.47
SRM-202ENST00000459997 ANKRD39Q53RE8 183 aa12.1□□□□□ -0.47
SRM-202ENST00000459997 LITAFQ99732 161 aa12.1□□□□□ -0.47
SRM-202ENST00000459997 ZNF706Q9Y5V0 76 aaPredicted RBP12.1□□□□□ -0.47
SRM-202ENST00000459997 ETDCA0A1B0GVM5 59 aa12.09□□□□□ -0.47
SRM-202ENST00000459997 MIEN1Q9BRT3 115 aa12.09□□□□□ -0.47
SRM-202ENST00000459997 S100A2P29034 98 aa12.08□□□□□ -0.48
SRM-202ENST00000459997 KRTAP4-16G5E9R7 235 aaPredicted RBP12.07□□□□□ -0.48
SRM-202ENST00000459997 S100A12P80511 92 aa12.07□□□□□ -0.48
SRM-202ENST00000459997 S100A6P06703 90 aa12.06□□□□□ -0.48
SRM-202ENST00000459997 SMCR5Q8TEV8 140 aa12.06□□□□□ -0.48
SRM-202ENST00000459997 TIMM17BO60830 172 aa12.05□□□□□ -0.48
SRM-202ENST00000459997 CTAG1AP78358 180 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms