RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 TMEM126AQ9H061 195 aa4.49□□□□□ -1.69
HPS4-207ENST00000459918 NXT2Q9NPJ8 142 aaKnown RBP4.49□□□□□ -1.69
HPS4-207ENST00000459918 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
HPS4-207ENST00000459918 K7EMI3 77 aa4.48□□□□□ -1.69
HPS4-207ENST00000459918 NPSP0C0P6 89 aa4.48□□□□□ -1.69
HPS4-207ENST00000459918 PFN2P35080 140 aa4.48□□□□□ -1.69
HPS4-207ENST00000459918 KRTAP13-3Q3SY46 172 aa4.48□□□□□ -1.69
HPS4-207ENST00000459918 CLLU1Q5K131 121 aa4.48□□□□□ -1.69
HPS4-207ENST00000459918 DAND5Q8N907 189 aa4.48□□□□□ -1.69
HPS4-207ENST00000459918 TOMM6Q96B49 74 aa4.48□□□□□ -1.69
HPS4-207ENST00000459918 SMIM1B2RUZ4 78 aa4.47□□□□□ -1.69
HPS4-207ENST00000459918 RPL24P83731 157 aaKnown RBP4.47□□□□□ -1.69
HPS4-207ENST00000459918 IFITM2Q01629 132 aa4.47□□□□□ -1.69
HPS4-207ENST00000459918 ERASQ7Z444 233 aa4.47□□□□□ -1.69
HPS4-207ENST00000459918 Q8NBF4 154 aa4.47□□□□□ -1.69
HPS4-207ENST00000459918 SCGB3A1Q96QR1 104 aa4.47□□□□□ -1.69
HPS4-207ENST00000459918 TIMM17AQ99595 171 aa4.47□□□□□ -1.69
HPS4-207ENST00000459918 ZNF706Q9Y5V0 76 aaPredicted RBP4.47□□□□□ -1.69
HPS4-207ENST00000459918 TMEM218A2RU14 115 aa4.46□□□□□ -1.7
HPS4-207ENST00000459918 SPINK8P0C7L1 97 aa4.46□□□□□ -1.7
HPS4-207ENST00000459918 G0S2P27469 103 aa4.46□□□□□ -1.7
HPS4-207ENST00000459918 PDZD11Q5EBL8 140 aa4.46□□□□□ -1.7
HPS4-207ENST00000459918 PLEKHB2Q96CS7 222 aa4.46□□□□□ -1.7
HPS4-207ENST00000459918 GNB1LQ9BYB4 327 aa4.46□□□□□ -1.7
HPS4-207ENST00000459918 FAM19A2Q8N3H0 131 aa4.45□□□□□ -1.7
HPS4-207ENST00000459918 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
HPS4-207ENST00000459918 CST9LQ9H4G1 147 aa4.45□□□□□ -1.7
HPS4-207ENST00000459918 TRAV9-1A0A075B6T8 112 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 TINCRA0A1B0GVN0 87 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 LINC01546A6NGU7 62 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 H3BRM9 83 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 M0R378 163 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 SPINK1P00995 79 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 CFC1BP0CG36 223 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 UQCC3Q6UW78 93 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 SPRR4Q96PI1 79 aa4.44□□□□□ -1.7
HPS4-207ENST00000459918 IGLV5-45A0A087WSX0 123 aa4.43□□□□□ -1.7
HPS4-207ENST00000459918 S100PP25815 95 aa4.43□□□□□ -1.7
HPS4-207ENST00000459918 SEC11CQ9BY50 192 aa4.43□□□□□ -1.7
HPS4-207ENST00000459918 SND1-IT1Q9HBX3 110 aa4.43□□□□□ -1.7
HPS4-207ENST00000459918 IGLV9-49A0A0B4J1Y8 123 aa4.42□□□□□ -1.7
HPS4-207ENST00000459918 M0R2T5 61 aa4.42□□□□□ -1.7
HPS4-207ENST00000459918 VPREB1P12018 145 aa4.42□□□□□ -1.7
HPS4-207ENST00000459918 FABP9Q0Z7S8 132 aa4.42□□□□□ -1.7
HPS4-207ENST00000459918 PMVKQ15126 192 aa4.42□□□□□ -1.7
HPS4-207ENST00000459918 FA2HQ7L5A8 372 aa4.42□□□□□ -1.7
HPS4-207ENST00000459918 COMMD7Q86VX2 200 aa4.42□□□□□ -1.7
HPS4-207ENST00000459918 URB1-AS1Q96HZ7 61 aa4.42□□□□□ -1.7
HPS4-207ENST00000459918 ZNF625Q96I27 306 aaPredicted RBP4.42□□□□□ -1.7
HPS4-207ENST00000459918 ERG28Q9UKR5 140 aa4.42□□□□□ -1.7
HPS4-207ENST00000459918 A0A096LNJ9 63 aa4.41□□□□□ -1.7
HPS4-207ENST00000459918 NDUFA6P56556 154 aa4.41□□□□□ -1.7
HPS4-207ENST00000459918 MOBPQ13875 183 aa4.41□□□□□ -1.7
HPS4-207ENST00000459918 RPS10P5Q9NQ39 176 aa4.41□□□□□ -1.7
HPS4-207ENST00000459918 SMCO4Q9NRQ5 59 aa4.41□□□□□ -1.7
HPS4-207ENST00000459918 ETDCA0A1B0GVM5 59 aa4.4□□□□□ -1.71
HPS4-207ENST00000459918 LINC01549A6NIU2 74 aa4.4□□□□□ -1.71
HPS4-207ENST00000459918 SLC25A20O43772 301 aa4.4□□□□□ -1.71
HPS4-207ENST00000459918 PMCHL1Q16048 86 aa4.4□□□□□ -1.71
HPS4-207ENST00000459918 COX19Q49B96 90 aa4.4□□□□□ -1.71
HPS4-207ENST00000459918 C10orf91Q5T1B1 145 aa4.4□□□□□ -1.71
HPS4-207ENST00000459918 IGLV5-39A0A0G2JS06 123 aa4.39□□□□□ -1.71
HPS4-207ENST00000459918 ATP6V1G1O75348 118 aa4.39□□□□□ -1.71
HPS4-207ENST00000459918 IGLC3P0DOY3 106 aa4.39□□□□□ -1.71
HPS4-207ENST00000459918 ZNF22P17026 224 aaPredicted RBP4.39□□□□□ -1.71
HPS4-207ENST00000459918 LINC00158P58513 81 aa4.39□□□□□ -1.71
HPS4-207ENST00000459918 S100A12P80511 92 aa4.39□□□□□ -1.71
HPS4-207ENST00000459918 COX17Q14061 63 aa4.39□□□□□ -1.71
HPS4-207ENST00000459918 GAGE2AQ6NT46 116 aa4.39□□□□□ -1.71
HPS4-207ENST00000459918 C18orf32Q8TCD1 76 aa4.39□□□□□ -1.71
HPS4-207ENST00000459918 IGLV8-61A0A075B6I0 122 aa4.38□□□□□ -1.71
HPS4-207ENST00000459918 A0A0U1RRA0 63 aa4.38□□□□□ -1.71
HPS4-207ENST00000459918 LINC00614P0C842 121 aa4.38□□□□□ -1.71
HPS4-207ENST00000459918 MT1HP80294 61 aa4.38□□□□□ -1.71
HPS4-207ENST00000459918 C9orf153Q5TBE3 101 aa4.38□□□□□ -1.71
HPS4-207ENST00000459918 Q8N377 158 aa4.38□□□□□ -1.71
HPS4-207ENST00000459918 Q8NDZ9 215 aa4.38□□□□□ -1.71
HPS4-207ENST00000459918 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
HPS4-207ENST00000459918 TRAPPC1Q9Y5R8 145 aa4.38□□□□□ -1.71
HPS4-207ENST00000459918 C11orf86A6NJI1 115 aa4.37□□□□□ -1.71
HPS4-207ENST00000459918 PRYO14603 147 aa4.37□□□□□ -1.71
HPS4-207ENST00000459918 NCR3O14931 201 aa4.37□□□□□ -1.71
HPS4-207ENST00000459918 RHEBQ15382 184 aa4.37□□□□□ -1.71
HPS4-207ENST00000459918 COX6B2Q6YFQ2 88 aa4.37□□□□□ -1.71
HPS4-207ENST00000459918 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
HPS4-207ENST00000459918 HBDP02042 147 aa4.36□□□□□ -1.71
HPS4-207ENST00000459918 RPS29P62273 56 aaKnown RBP4.36□□□□□ -1.71
HPS4-207ENST00000459918 PCOTHQ58A44 107 aa4.36□□□□□ -1.71
HPS4-207ENST00000459918 TMEM170BQ5T4T1 132 aa4.36□□□□□ -1.71
HPS4-207ENST00000459918 SFTA2Q6UW10 78 aa4.36□□□□□ -1.71
HPS4-207ENST00000459918 APOC3P02656 99 aa4.35□□□□□ -1.71
HPS4-207ENST00000459918 C9orf92A6NGG3 77 aa4.34□□□□□ -1.71
HPS4-207ENST00000459918 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
HPS4-207ENST00000459918 MEIG1Q5JSS6 88 aa4.34□□□□□ -1.71
HPS4-207ENST00000459918 SSBP3-AS1Q7Z2R9 100 aa4.34□□□□□ -1.71
HPS4-207ENST00000459918 BOD1L2Q8IYS8 172 aa4.34□□□□□ -1.71
HPS4-207ENST00000459918 CHTOPQ9Y3Y2 248 aaKnown RBP4.34□□□□□ -1.71
HPS4-207ENST00000459918 LINC00483Q53H64 154 aa4.33□□□□□ -1.72
HPS4-207ENST00000459918 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms