RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 GAGE10A6NGK3 116 aa5.92□□□□□ -1.46
HDLBP-228ENST00000459788 HSBP1O75506 76 aa5.92□□□□□ -1.46
HDLBP-228ENST00000459788 TMEM126AQ9H061 195 aa5.92□□□□□ -1.46
HDLBP-228ENST00000459788 TYMSOSQ8TAI1 123 aa5.91□□□□□ -1.46
HDLBP-228ENST00000459788 IGKV2-28A0A075B6P5 120 aa5.9□□□□□ -1.46
HDLBP-228ENST00000459788 A0A087X002 238 aa5.9□□□□□ -1.46
HDLBP-228ENST00000459788 IGKV2D-26A0A0A0MRZ7 120 aa5.9□□□□□ -1.46
HDLBP-228ENST00000459788 M0R378 163 aa5.9□□□□□ -1.46
HDLBP-228ENST00000459788 IGKV2D-28P01615 120 aa5.9□□□□□ -1.46
HDLBP-228ENST00000459788 LINC00158P58513 81 aa5.9□□□□□ -1.46
HDLBP-228ENST00000459788 MAP1LC3CQ9BXW4 147 aa5.9□□□□□ -1.46
HDLBP-228ENST00000459788 RNF213Q63HN8 5207 aa5.9□□□□□ -1.47
HDLBP-228ENST00000459788 MYMXA0A1B0GTQ4 84 aa5.89□□□□□ -1.47
HDLBP-228ENST00000459788 ATP6V1G1O75348 118 aa5.89□□□□□ -1.47
HDLBP-228ENST00000459788 PLNP26678 52 aa5.89□□□□□ -1.47
HDLBP-228ENST00000459788 FAM19A1Q7Z5A9 133 aa5.89□□□□□ -1.47
HDLBP-228ENST00000459788 LOC107984156A0A0G2JMH3 177 aa5.88□□□□□ -1.47
HDLBP-228ENST00000459788 PRYO14603 147 aa5.88□□□□□ -1.47
HDLBP-228ENST00000459788 LEPROTL1O95214 131 aa5.88□□□□□ -1.47
HDLBP-228ENST00000459788 CBLN2Q8IUK8 224 aa5.88□□□□□ -1.47
HDLBP-228ENST00000459788 ARL17AQ8IVW1 177 aa5.88□□□□□ -1.47
HDLBP-228ENST00000459788 HSPB8Q9UJY1 196 aa5.88□□□□□ -1.47
HDLBP-228ENST00000459788 LPAP08519 4548 aa5.88□□□□□ -1.47
HDLBP-228ENST00000459788 TRGC2P03986 189 aa5.87□□□□□ -1.47
HDLBP-228ENST00000459788 NMUP48645 174 aa5.87□□□□□ -1.47
HDLBP-228ENST00000459788 LINC00337Q8N6G1 96 aa5.87□□□□□ -1.47
HDLBP-228ENST00000459788 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
HDLBP-228ENST00000459788 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
HDLBP-228ENST00000459788 NDUFA12Q9UI09 145 aa5.87□□□□□ -1.47
HDLBP-228ENST00000459788 ZNF706Q9Y5V0 76 aaPredicted RBP5.87□□□□□ -1.47
HDLBP-228ENST00000459788 TMEM238C9JI98 176 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 LEPROTO15243 131 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 SCO1O75880 301 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 SMIM13P0DJ93 91 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 S100A12P80511 92 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 PRLHP81277 87 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 PRR4Q16378 134 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 KRTAP13-2Q52LG2 175 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 MEIG1Q5JSS6 88 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 FAM19A2Q8N3H0 131 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 Q8NDZ9 215 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 KCNQ1DNQ9H478 68 aa5.86□□□□□ -1.47
HDLBP-228ENST00000459788 SERF1AO75920 110 aa5.85□□□□□ -1.47
HDLBP-228ENST00000459788 SPRR1AP35321 89 aa5.85□□□□□ -1.47
HDLBP-228ENST00000459788 HERVK_113P61574 105 aa5.85□□□□□ -1.47
HDLBP-228ENST00000459788 BOD1L2Q8IYS8 172 aa5.85□□□□□ -1.47
HDLBP-228ENST00000459788 MIR7-3HGQ8N6C7 128 aa5.85□□□□□ -1.47
HDLBP-228ENST00000459788 LINC00304Q8N9R0 145 aa5.85□□□□□ -1.47
HDLBP-228ENST00000459788 TRBV10-2A0A0K0K1G8 114 aa5.84□□□□□ -1.47
HDLBP-228ENST00000459788 DPM2O94777 84 aa5.84□□□□□ -1.47
HDLBP-228ENST00000459788 LINC00310P59036 64 aa5.84□□□□□ -1.47
HDLBP-228ENST00000459788 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.47
HDLBP-228ENST00000459788 COLCA2A8K830 154 aa5.83□□□□□ -1.48
HDLBP-228ENST00000459788 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
HDLBP-228ENST00000459788 A0A0U1RRA0 63 aa5.82□□□□□ -1.48
HDLBP-228ENST00000459788 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
HDLBP-228ENST00000459788 J3QQQ9 107 aa5.82□□□□□ -1.48
HDLBP-228ENST00000459788 NDUFC2O95298 119 aa5.82□□□□□ -1.48
HDLBP-228ENST00000459788 TSPAN13O95857 204 aa5.82□□□□□ -1.48
HDLBP-228ENST00000459788 IGKCP01834 107 aa5.82□□□□□ -1.48
HDLBP-228ENST00000459788 SPRR4Q96PI1 79 aa5.82□□□□□ -1.48
HDLBP-228ENST00000459788 HIGD2AQ9BW72 106 aa5.82□□□□□ -1.48
HDLBP-228ENST00000459788 ANAPC11Q9NYG5 84 aa5.82□□□□□ -1.48
HDLBP-228ENST00000459788 SPANXB1Q9NS25 103 aaPredicted RBP5.81□□□□□ -1.48
HDLBP-228ENST00000459788 CBY1Q9Y3M2 126 aa5.81□□□□□ -1.48
HDLBP-228ENST00000459788 TRBV10-3A0A0K0K1G6 114 aa5.8□□□□□ -1.48
HDLBP-228ENST00000459788 ETDCA0A1B0GVM5 59 aa5.8□□□□□ -1.48
HDLBP-228ENST00000459788 H0Y8G0 127 aa5.8□□□□□ -1.48
HDLBP-228ENST00000459788 LGALS3P17931 250 aaKnown RBP5.8□□□□□ -1.48
HDLBP-228ENST00000459788 MIEN1Q9BRT3 115 aa5.8□□□□□ -1.48
HDLBP-228ENST00000459788 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
HDLBP-228ENST00000459788 TSPEAR-AS2P59090 65 aa5.79□□□□□ -1.48
HDLBP-228ENST00000459788 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
HDLBP-228ENST00000459788 LINC00483Q53H64 154 aa5.79□□□□□ -1.48
HDLBP-228ENST00000459788 A0A0U1RQV1 116 aa5.78□□□□□ -1.48
HDLBP-228ENST00000459788 C5orf52A6NGY3 159 aa5.78□□□□□ -1.48
HDLBP-228ENST00000459788 E9PLD3 99 aa5.78□□□□□ -1.48
HDLBP-228ENST00000459788 NCR3O14931 201 aa5.78□□□□□ -1.48
HDLBP-228ENST00000459788 FABP4P15090 132 aa5.78□□□□□ -1.48
HDLBP-228ENST00000459788 DDTP30046 118 aa5.78□□□□□ -1.48
HDLBP-228ENST00000459788 SLC7A5P1Q8MH63 180 aa5.78□□□□□ -1.48
HDLBP-228ENST00000459788 B5MCH6 92 aa5.77□□□□□ -1.49
HDLBP-228ENST00000459788 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
HDLBP-228ENST00000459788 RPS29P62273 56 aaKnown RBP5.77□□□□□ -1.49
HDLBP-228ENST00000459788 JOSD1Q15040 202 aaPredicted RBP5.77□□□□□ -1.49
HDLBP-228ENST00000459788 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.49
HDLBP-228ENST00000459788 FP248Q71RG6 208 aaPredicted RBP5.77□□□□□ -1.49
HDLBP-228ENST00000459788 SMCR5Q8TEV8 140 aa5.77□□□□□ -1.49
HDLBP-228ENST00000459788 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
HDLBP-228ENST00000459788 SYS1-DBNDD2H3BUS1 97 aa5.76□□□□□ -1.49
HDLBP-228ENST00000459788 TIMM17BO60830 172 aa5.76□□□□□ -1.49
HDLBP-228ENST00000459788 SPINK1P00995 79 aa5.76□□□□□ -1.49
HDLBP-228ENST00000459788 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
HDLBP-228ENST00000459788 Q6ZRX8 168 aa5.76□□□□□ -1.49
HDLBP-228ENST00000459788 C3orf22Q8N5N4 141 aa5.76□□□□□ -1.49
HDLBP-228ENST00000459788 IGLV7-46A0A075B6I9 117 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 A0A0J9YXY3 114 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST1H2BKO60814 126 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST1H2BJP06899 126 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST1H2BOP23527 126 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms