RNA–Protein interactions for RNA: ENST00000459235.1

snoU13.28-201, humanhuman

BASIC

Gene snoU13, Length 104 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
snoU13.28-201ENST00000459235 SMIM31A0A1B0GVY4 71 aa0.86□□□□□ -2.27
snoU13.28-201ENST00000459235 HMGA1P17096 107 aaKnown RBP0.86□□□□□ -2.27
snoU13.28-201ENST00000459235 IFI27P40305 119 aaPredicted RBP0.86□□□□□ -2.27
snoU13.28-201ENST00000459235 KRTAP5-4Q6L8H1 288 aa0.86□□□□□ -2.27
snoU13.28-201ENST00000459235 Q8IZM0 81 aa0.86□□□□□ -2.27
snoU13.28-201ENST00000459235 USP32Q8NFA0 1604 aa0.86□□□□□ -2.27
snoU13.28-201ENST00000459235 ZNF831Q5JPB2 1677 aa0.85□□□□□ -2.27
snoU13.28-201ENST00000459235 A0A087WXM4 84 aa0.85□□□□□ -2.27
snoU13.28-201ENST00000459235 RPL38P63173 70 aaKnown RBP0.85□□□□□ -2.27
snoU13.28-201ENST00000459235 GAFA1Q96PS6 74 aa0.85□□□□□ -2.27
snoU13.28-201ENST00000459235 INO80Q9ULG1 1556 aaPredicted RBP0.85□□□□□ -2.27
snoU13.28-201ENST00000459235 ANKRD50Q9ULJ7 1429 aa0.85□□□□□ -2.27
snoU13.28-201ENST00000459235 CD163L1Q9NR16 1453 aa0.85□□□□□ -2.27
snoU13.28-201ENST00000459235 WIZO95785 1651 aa0.84□□□□□ -2.27
snoU13.28-201ENST00000459235 PREX1Q8TCU6 1659 aa0.84□□□□□ -2.27
snoU13.28-201ENST00000459235 EFCAB5A4FU69 1503 aa0.84□□□□□ -2.27
snoU13.28-201ENST00000459235 DOT1LQ8TEK3 1739 aa0.84□□□□□ -2.27
snoU13.28-201ENST00000459235 TRAV21A0A0B4J279 112 aa0.84□□□□□ -2.27
snoU13.28-201ENST00000459235 COX7BP24311 80 aa0.84□□□□□ -2.27
snoU13.28-201ENST00000459235 NHSQ6T4R5 1651 aa0.84□□□□□ -2.28
snoU13.28-201ENST00000459235 SPTY2D1-AS1A0A0U1RR47 76 aa0.83□□□□□ -2.28
snoU13.28-201ENST00000459235 COX8AP10176 69 aa0.83□□□□□ -2.28
snoU13.28-201ENST00000459235 WFDC9Q8NEX5 89 aa0.83□□□□□ -2.28
snoU13.28-201ENST00000459235 FMN2Q9NZ56 1722 aa0.83□□□□□ -2.28
snoU13.28-201ENST00000459235 NWD1Q149M9 1564 aa0.83□□□□□ -2.28
snoU13.28-201ENST00000459235 CCDC180Q9P1Z9 1646 aa0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 C2CD3Q4AC94 2353 aa0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 K7EQZ3 153 aa0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 COX6B1P14854 86 aa0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 PRB3Q04118 309 aaPredicted RBP0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 Q5VSD8 79 aa0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 HEPN1Q6WQI6 88 aa0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 CRIPTQ9P021 101 aa0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 NESP48681 1621 aa0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 ABCA9Q8IUA7 1624 aa0.82□□□□□ -2.28
snoU13.28-201ENST00000459235 PTPRZ1P23471 2315 aaPredicted RBP0.81□□□□□ -2.28
snoU13.28-201ENST00000459235 TTC28Q96AY4 2481 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 LMTK2Q8IWU2 1503 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 USF3Q68DE3 2245 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 CDC42BPGQ6DT37 1551 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 CACNA1EQ15878 2313 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 FXYD6-FXYD2A0A087WZ82 144 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 LCE6AA0A183 80 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 I3L3M4 83 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 KRTAP5-7Q6L8G8 165 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 KRTAP4-4Q9BYR3 166 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 KRTAP4-3Q9BYR4 195 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 TRIOBPQ9H2D6 2365 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 DDX60LQ5H9U9 1706 aaKnown RBP0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 RICTORQ6R327 1708 aa0.8□□□□□ -2.28
snoU13.28-201ENST00000459235 ASXL1Q8IXJ9 1541 aa0.79□□□□□ -2.28
snoU13.28-201ENST00000459235 TIAM1Q13009 1591 aa0.79□□□□□ -2.28
snoU13.28-201ENST00000459235 CPSF4LA6NMK7 179 aaKnown RBP0.79□□□□□ -2.28
snoU13.28-201ENST00000459235 CCL22O00626 93 aa0.79□□□□□ -2.28
snoU13.28-201ENST00000459235 IFI6P09912 130 aa0.79□□□□□ -2.28
snoU13.28-201ENST00000459235 NREPQ16612 68 aa0.79□□□□□ -2.28
snoU13.28-201ENST00000459235 SPTBN2O15020 2390 aa0.79□□□□□ -2.28
snoU13.28-201ENST00000459235 HFM1A2PYH4 1435 aa0.79□□□□□ -2.28
snoU13.28-201ENST00000459235 PTPRQQ9UMZ3 2332 aa0.78□□□□□ -2.28
snoU13.28-201ENST00000459235 TNRC6CQ9HCJ0 1690 aaKnown RBP0.78□□□□□ -2.28
snoU13.28-201ENST00000459235 Q5BKY6 102 aa0.78□□□□□ -2.28
snoU13.28-201ENST00000459235 THOC2Q8NI27 1593 aaKnown RBP0.78□□□□□ -2.29
snoU13.28-201ENST00000459235 MADDQ8WXG6 1647 aa0.78□□□□□ -2.29
snoU13.28-201ENST00000459235 NRAPQ86VF7 1730 aa0.78□□□□□ -2.29
snoU13.28-201ENST00000459235 MUC19Q7Z5P9 8384 aa0.77□□□□□ -2.29
snoU13.28-201ENST00000459235 CNOT1A5YKK6 2376 aaKnown RBP0.76□□□□□ -2.29
snoU13.28-201ENST00000459235 RALGAPBQ86X10 1494 aa0.76□□□□□ -2.29
snoU13.28-201ENST00000459235 A0A087WWC5 75 aa0.76□□□□□ -2.29
snoU13.28-201ENST00000459235 MRPL34Q9BQ48 92 aaKnown RBP0.76□□□□□ -2.29
snoU13.28-201ENST00000459235 F8P00451 2351 aa0.76□□□□□ -2.29
snoU13.28-201ENST00000459235 H3BVH4 76 aa0.75□□□□□ -2.29
snoU13.28-201ENST00000459235 COX6B2Q6YFQ2 88 aa0.75□□□□□ -2.29
snoU13.28-201ENST00000459235 PIEZO2Q9H5I5 2752 aa0.74□□□□□ -2.29
snoU13.28-201ENST00000459235 POLQO75417 2590 aa0.74□□□□□ -2.29
snoU13.28-201ENST00000459235 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
snoU13.28-201ENST00000459235 ATXN8Q156A1 80 aa0.74□□□□□ -2.29
snoU13.28-201ENST00000459235 SPINK6Q6UWN8 80 aa0.74□□□□□ -2.29
snoU13.28-201ENST00000459235 TNCP24821 2201 aa0.73□□□□□ -2.29
snoU13.28-201ENST00000459235 TJP1Q07157 1748 aa0.73□□□□□ -2.29
snoU13.28-201ENST00000459235 NDUFA4O00483 81 aa0.73□□□□□ -2.29
snoU13.28-201ENST00000459235 RNF17Q9BXT8 1623 aaKnown RBP0.73□□□□□ -2.29
snoU13.28-201ENST00000459235 ABCA12Q86UK0 2595 aa0.73□□□□□ -2.29
snoU13.28-201ENST00000459235 FRAS1Q86XX4 4008 aa0.73□□□□□ -2.29
snoU13.28-201ENST00000459235 SPRR1AP35321 89 aa0.72□□□□□ -2.29
snoU13.28-201ENST00000459235 S100ZQ8WXG8 99 aa0.72□□□□□ -2.29
snoU13.28-201ENST00000459235 GNG13Q9P2W3 67 aa0.72□□□□□ -2.29
snoU13.28-201ENST00000459235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.72□□□□□ -2.29
snoU13.28-201ENST00000459235 DIP2AQ14689 1571 aa0.71□□□□□ -2.3
snoU13.28-201ENST00000459235 SPRR1BP22528 89 aa0.71□□□□□ -2.3
snoU13.28-201ENST00000459235 DEFB105AQ8NG35 78 aa0.71□□□□□ -2.3
snoU13.28-201ENST00000459235 HILPDAQ9Y5L2 63 aa0.71□□□□□ -2.3
snoU13.28-201ENST00000459235 C4AP0C0L4 1744 aa0.71□□□□□ -2.3
snoU13.28-201ENST00000459235 C4BP0C0L5 1744 aa0.71□□□□□ -2.3
snoU13.28-201ENST00000459235 C3P01024 1663 aa0.71□□□□□ -2.3
snoU13.28-201ENST00000459235 SPTBN1Q01082 2364 aaKnown RBP0.7□□□□□ -2.3
snoU13.28-201ENST00000459235 PKDREJQ9NTG1 2253 aa0.7□□□□□ -2.3
snoU13.28-201ENST00000459235 SPINK4O60575 86 aa0.7□□□□□ -2.3
snoU13.28-201ENST00000459235 KRTAP5-9P26371 169 aa0.7□□□□□ -2.3
snoU13.28-201ENST00000459235 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
snoU13.28-201ENST00000459235 ABCA6Q8N139 1617 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms