RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
CD28-203ENST00000458610 PLEKHB2Q96CS7 222 aa9.95□□□□□ -0.82
CD28-203ENST00000458610 C12orf57Q99622 126 aa9.95□□□□□ -0.82
CD28-203ENST00000458610 DMBT1Q9UGM3 2413 aaPredicted RBP9.94□□□□□ -0.82
CD28-203ENST00000458610 MYMXA0A1B0GTQ4 84 aa9.94□□□□□ -0.82
CD28-203ENST00000458610 IGLV7-43P04211 117 aa9.94□□□□□ -0.82
CD28-203ENST00000458610 RPL24P83731 157 aaKnown RBP9.94□□□□□ -0.82
CD28-203ENST00000458610 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
CD28-203ENST00000458610 SYS1-DBNDD2H3BUS1 97 aa9.93□□□□□ -0.82
CD28-203ENST00000458610 LEPROTO15243 131 aa9.93□□□□□ -0.82
CD28-203ENST00000458610 HIST3H2BBQ8N257 126 aa9.93□□□□□ -0.82
CD28-203ENST00000458610 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
CD28-203ENST00000458610 NDUFA12Q9UI09 145 aa9.93□□□□□ -0.82
CD28-203ENST00000458610 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
CD28-203ENST00000458610 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
CD28-203ENST00000458610 PET117Q6UWS5 81 aa9.91□□□□□ -0.82
CD28-203ENST00000458610 PMCHL2Q9BQD1 86 aa9.91□□□□□ -0.82
CD28-203ENST00000458610 LGALS3P17931 250 aaKnown RBP9.9□□□□□ -0.82
CD28-203ENST00000458610 NMUP48645 174 aa9.9□□□□□ -0.82
CD28-203ENST00000458610 KRTAP11-1Q8IUC1 163 aa9.9□□□□□ -0.82
CD28-203ENST00000458610 LINC00167Q96N53 147 aa9.9□□□□□ -0.82
CD28-203ENST00000458610 J3QQQ9 107 aa9.89□□□□□ -0.83
CD28-203ENST00000458610 LINC01600Q96MT4 127 aa9.89□□□□□ -0.83
CD28-203ENST00000458610 A0A0U1RRA0 63 aa9.87□□□□□ -0.83
CD28-203ENST00000458610 SMIM13P0DJ93 91 aa9.87□□□□□ -0.83
CD28-203ENST00000458610 LINC01545Q5VT33 79 aa9.87□□□□□ -0.83
CD28-203ENST00000458610 GAGE10A6NGK3 116 aa9.86□□□□□ -0.83
CD28-203ENST00000458610 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
CD28-203ENST00000458610 VPREB1P12018 145 aa9.86□□□□□ -0.83
CD28-203ENST00000458610 HIST1H2BLQ99880 126 aa9.86□□□□□ -0.83
CD28-203ENST00000458610 C20orf202A1L168 122 aa9.85□□□□□ -0.83
CD28-203ENST00000458610 E9PLD3 99 aa9.85□□□□□ -0.83
CD28-203ENST00000458610 ZNF861PO60384 105 aa9.85□□□□□ -0.83
CD28-203ENST00000458610 JOSD1Q15040 202 aaPredicted RBP9.85□□□□□ -0.83
CD28-203ENST00000458610 MYCBP2O75592 4640 aa9.84□□□□□ -0.83
CD28-203ENST00000458610 H0Y9J4 135 aa9.84□□□□□ -0.83
CD28-203ENST00000458610 BCE1O60756 84 aa9.84□□□□□ -0.83
CD28-203ENST00000458610 C3orf79P0CE67 100 aa9.84□□□□□ -0.83
CD28-203ENST00000458610 RPL28P46779 137 aaKnown RBP9.84□□□□□ -0.83
CD28-203ENST00000458610 KRTDAPP60985 99 aa9.84□□□□□ -0.83
CD28-203ENST00000458610 MIR7-3HGQ8N6C7 128 aa9.84□□□□□ -0.83
CD28-203ENST00000458610 TSPEAR-AS2P59090 65 aa9.83□□□□□ -0.84
CD28-203ENST00000458610 M0R378 163 aa9.82□□□□□ -0.84
CD28-203ENST00000458610 BOD1L2Q8IYS8 172 aa9.82□□□□□ -0.84
CD28-203ENST00000458610 IGLV1-50A0A075B6I6 118 aa9.81□□□□□ -0.84
CD28-203ENST00000458610 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
CD28-203ENST00000458610 IGKV2-28A0A075B6P5 120 aa9.8□□□□□ -0.84
CD28-203ENST00000458610 IGKV2D-28P01615 120 aa9.8□□□□□ -0.84
CD28-203ENST00000458610 MIEN1Q9BRT3 115 aa9.8□□□□□ -0.84
CD28-203ENST00000458610 IGKV2D-26A0A0A0MRZ7 120 aa9.79□□□□□ -0.84
CD28-203ENST00000458610 UBE2AP49459 152 aa9.79□□□□□ -0.84
CD28-203ENST00000458610 PYY3Q5JQD4 70 aa9.79□□□□□ -0.84
CD28-203ENST00000458610 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
CD28-203ENST00000458610 TSTD3H0UI37 97 aa9.78□□□□□ -0.84
CD28-203ENST00000458610 KRTAP10-8P60410 259 aa9.78□□□□□ -0.84
CD28-203ENST00000458610 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
CD28-203ENST00000458610 PCP4L1A6NKN8 68 aa9.77□□□□□ -0.85
CD28-203ENST00000458610 SCGB1D1O95968 90 aa9.77□□□□□ -0.85
CD28-203ENST00000458610 A0A0J9YXY3 114 aa9.76□□□□□ -0.85
CD28-203ENST00000458610 TMEM126AQ9H061 195 aa9.76□□□□□ -0.85
CD28-203ENST00000458610 PKHD1L1Q86WI1 4243 aa9.76□□□□□ -0.85
CD28-203ENST00000458610 Q8NDZ9 215 aa9.75□□□□□ -0.85
CD28-203ENST00000458610 FAM19A1Q7Z5A9 133 aa9.74□□□□□ -0.85
CD28-203ENST00000458610 DAND5Q8N907 189 aa9.74□□□□□ -0.85
CD28-203ENST00000458610 TRBV10-2A0A0K0K1G8 114 aa9.73□□□□□ -0.85
CD28-203ENST00000458610 ZNF815PA8K554 130 aa9.73□□□□□ -0.85
CD28-203ENST00000458610 TIMM17BO60830 172 aa9.73□□□□□ -0.85
CD28-203ENST00000458610 RPL13AP40429 203 aaKnown RBP9.73□□□□□ -0.85
CD28-203ENST00000458610 LRP1Q07954 4544 aaKnown RBP9.73□□□□□ -0.85
CD28-203ENST00000458610 TMEM238C9JI98 176 aa9.72□□□□□ -0.85
CD28-203ENST00000458610 PRYO14603 147 aa9.72□□□□□ -0.85
CD28-203ENST00000458610 NCR3O14931 201 aa9.72□□□□□ -0.85
CD28-203ENST00000458610 NDUFC2O95298 119 aa9.72□□□□□ -0.85
CD28-203ENST00000458610 SPANXB1Q9NS25 103 aaPredicted RBP9.71□□□□□ -0.86
CD28-203ENST00000458610 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
CD28-203ENST00000458610 ADAMTSL4-AS1Q5T5F5 129 aa9.7□□□□□ -0.86
CD28-203ENST00000458610 KRTAP13-1Q8IUC0 172 aa9.7□□□□□ -0.86
CD28-203ENST00000458610 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
CD28-203ENST00000458610 KCNQ1DNQ9H478 68 aa9.7□□□□□ -0.86
CD28-203ENST00000458610 FAT3Q8TDW7 4589 aa9.69□□□□□ -0.86
CD28-203ENST00000458610 CBY1Q9Y3M2 126 aa9.69□□□□□ -0.86
CD28-203ENST00000458610 HERC1Q15751 4861 aa9.68□□□□□ -0.86
CD28-203ENST00000458610 TRBV10-3A0A0K0K1G6 114 aa9.68□□□□□ -0.86
CD28-203ENST00000458610 PRLHP81277 87 aa9.68□□□□□ -0.86
CD28-203ENST00000458610 S100A7L2Q5SY68 101 aa9.68□□□□□ -0.86
CD28-203ENST00000458610 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
CD28-203ENST00000458610 HSBP1L1C9JCN9 74 aa9.67□□□□□ -0.86
CD28-203ENST00000458610 DDTP30046 118 aa9.67□□□□□ -0.86
CD28-203ENST00000458610 ATOH7Q8N100 152 aa9.67□□□□□ -0.86
CD28-203ENST00000458610 LINC00337Q8N6G1 96 aa9.67□□□□□ -0.86
CD28-203ENST00000458610 COPS9Q8WXC6 57 aa9.67□□□□□ -0.86
CD28-203ENST00000458610 ETDCA0A1B0GVM5 59 aa9.66□□□□□ -0.86
CD28-203ENST00000458610 CRYGAP11844 174 aa9.66□□□□□ -0.86
CD28-203ENST00000458610 NPC2P61916 151 aa9.66□□□□□ -0.86
CD28-203ENST00000458610 LINC00308Q8TCZ7 52 aa9.66□□□□□ -0.86
CD28-203ENST00000458610 SPRR1AP35321 89 aa9.65□□□□□ -0.86
CD28-203ENST00000458610 ANKRD39Q53RE8 183 aa9.65□□□□□ -0.86
CD28-203ENST00000458610 LITAFQ99732 161 aa9.65□□□□□ -0.86
CD28-203ENST00000458610 VAMP8Q9BV40 100 aa9.65□□□□□ -0.86
CD28-203ENST00000458610 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms