RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PRB4P10163 310 aaPredicted RBP4.78□□□□□ -1.64
CUBNP3-201ENST00000457461 MP68P56378 58 aa4.78□□□□□ -1.64
CUBNP3-201ENST00000457461 DEFB114Q30KQ6 69 aa4.78□□□□□ -1.64
CUBNP3-201ENST00000457461 ZNF625Q96I27 306 aaPredicted RBP4.78□□□□□ -1.64
CUBNP3-201ENST00000457461 X6R8D5 127 aa4.78□□□□□ -1.64
CUBNP3-201ENST00000457461 A0A087WZ39 114 aa4.77□□□□□ -1.65
CUBNP3-201ENST00000457461 C16orf90A8MZG2 172 aa4.77□□□□□ -1.65
CUBNP3-201ENST00000457461 LINC01554Q52M75 96 aa4.77□□□□□ -1.65
CUBNP3-201ENST00000457461 ZFAND2AQ8N6M9 145 aa4.77□□□□□ -1.65
CUBNP3-201ENST00000457461 LINC00308Q8TCZ7 52 aa4.77□□□□□ -1.65
CUBNP3-201ENST00000457461 IGKV3-7A0A075B6H7 116 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 LCE6AA0A183 80 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 H0Y9J4 135 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 S100A4P26447 101 aaKnown RBP4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 DEFB1P60022 68 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 NREPQ16612 68 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 Q5VV11 94 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 VWFP04275 2813 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 LOC110117498A0A087WWA1 95 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 ELOF1P60002 83 aaKnown RBP4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 PRR9Q5T870 116 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 Q75L30 129 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 FAM19A3Q7Z5A8 133 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 ORMDL1Q9P0S3 153 aa4.76□□□□□ -1.65
CUBNP3-201ENST00000457461 IGHV3OR16-9A0A0B4J2B5 98 aa4.75□□□□□ -1.65
CUBNP3-201ENST00000457461 IGKV3D-20A0A0C4DH25 116 aa4.75□□□□□ -1.65
CUBNP3-201ENST00000457461 LOC101927531A0A1B0GV80 90 aa4.75□□□□□ -1.65
CUBNP3-201ENST00000457461 IGLV1-51P01701 117 aa4.75□□□□□ -1.65
CUBNP3-201ENST00000457461 LINC00313P59037 77 aa4.75□□□□□ -1.65
CUBNP3-201ENST00000457461 NOTCH2NLQ7Z3S9 236 aa4.75□□□□□ -1.65
CUBNP3-201ENST00000457461 FAM218AQ96MZ4 157 aa4.75□□□□□ -1.65
CUBNP3-201ENST00000457461 C11orf21Q9P2W6 132 aa4.75□□□□□ -1.65
CUBNP3-201ENST00000457461 NOTCH3Q9UM47 2321 aa4.74□□□□□ -1.65
CUBNP3-201ENST00000457461 CMYA5Q8N3K9 4069 aa4.74□□□□□ -1.65
CUBNP3-201ENST00000457461 TRRAPQ9Y4A5 3859 aa4.74□□□□□ -1.65
CUBNP3-201ENST00000457461 TRAV10A0A0B4J240 114 aa4.74□□□□□ -1.65
CUBNP3-201ENST00000457461 PSCAO43653 123 aa4.74□□□□□ -1.65
CUBNP3-201ENST00000457461 LINC01547P58512 204 aaPredicted RBP4.74□□□□□ -1.65
CUBNP3-201ENST00000457461 MAP6D1Q9H9H5 199 aa4.74□□□□□ -1.65
CUBNP3-201ENST00000457461 TRAV21A0A0B4J279 112 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 HCG22E2RYF7 251 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 C3orf84H3BNL1 204 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 ODF3L2Q3SX64 289 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 MUC4Q99102 2169 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 IGLV5-45A0A087WSX0 123 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 DEFB131AP59861 70 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 KRTAP24-1Q3LI83 254 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 MIR7-3HGQ8N6C7 128 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 C1orf64Q8NEQ6 169 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 OCR1Q9BZK8 76 aa4.73□□□□□ -1.65
CUBNP3-201ENST00000457461 Q8N3U1 123 aa4.72□□□□□ -1.65
CUBNP3-201ENST00000457461 LINC00337Q8N6G1 96 aa4.72□□□□□ -1.65
CUBNP3-201ENST00000457461 C19orf73Q9NVV2 129 aa4.72□□□□□ -1.65
CUBNP3-201ENST00000457461 FBN1P35555 2871 aaKnown RBP4.71□□□□□ -1.65
CUBNP3-201ENST00000457461 NDUFB1O75438 58 aa4.71□□□□□ -1.66
CUBNP3-201ENST00000457461 CMC4P56277 68 aaPredicted RBP4.71□□□□□ -1.66
CUBNP3-201ENST00000457461 C9orf66Q5T8R8 295 aa4.71□□□□□ -1.66
CUBNP3-201ENST00000457461 C20orf203Q8NBC4 194 aa4.71□□□□□ -1.66
CUBNP3-201ENST00000457461 ANK2Q01484 3957 aa4.71□□□□□ -1.66
CUBNP3-201ENST00000457461 STAB1Q9NY15 2570 aa4.71□□□□□ -1.66
CUBNP3-201ENST00000457461 BPY2O14599 106 aa4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 PSPHP1O15172 72 aa4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 PRM2P04554 102 aa4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 WFDC9Q8NEX5 89 aa4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 CDC42SE2Q9NRR3 84 aa4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 IGLV4-3A0A075B6K6 122 aa4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 PRR3P79522 188 aaKnown RBP4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 C9orf116Q5BN46 136 aaPredicted RBP4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 DNAH3Q8TD57 4116 aa4.7□□□□□ -1.66
CUBNP3-201ENST00000457461 A0A0J9YXV3 536 aa4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 CRPP02741 224 aa4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 RNASE3P12724 160 aaKnown RBP4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 LINC00315P59091 139 aa4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 SPINK13Q1W4C9 94 aa4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 C9orf129Q5T035 196 aaKnown RBP4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 ZCCHC13Q8WW36 166 aaKnown RBP4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 RPL39LQ96EH5 51 aaKnown RBP4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 LINC00467Q9BRT7 94 aa4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 Q9HAA7 133 aa4.69□□□□□ -1.66
CUBNP3-201ENST00000457461 CHKB-CPT1BH3BT56 60 aa4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 NCR3O14931 201 aa4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 IGKV3-20P01619 116 aa4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 PLA2G1BP04054 148 aaKnown RBP4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 Q6ZQT0 140 aa4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 Q9BRP9 147 aa4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 COL6A5A8TX70 2615 aa4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 IGHV1OR15-1A0A075B7D0 117 aa4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 IGHV3-16A0A0C4DH30 117 aa4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 A0A1B0GW54 56 aa4.68□□□□□ -1.66
CUBNP3-201ENST00000457461 IGKV2-29A2NJV5 120 aaPredicted RBP4.67□□□□□ -1.66
CUBNP3-201ENST00000457461 GIG44P09565 113 aaPredicted RBP4.67□□□□□ -1.66
CUBNP3-201ENST00000457461 RPL39P62891 51 aaKnown RBP4.67□□□□□ -1.66
CUBNP3-201ENST00000457461 FAM74A4Q5TZK3 123 aa4.67□□□□□ -1.66
CUBNP3-201ENST00000457461 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
CUBNP3-201ENST00000457461 A0A087WYN8 130 aa4.66□□□□□ -1.66
CUBNP3-201ENST00000457461 INSP01308 110 aa4.66□□□□□ -1.66
CUBNP3-201ENST00000457461 C11orf72Q8NBR9 251 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms