RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 LINC01561Q8N1V8 128 aa8.48□□□□□ -1.05
LINC00959-201ENST00000456581 WIPF1O43516 503 aa8.47□□□□□ -1.05
LINC00959-201ENST00000456581 C6orf223Q8N319 242 aa8.46□□□□□ -1.05
LINC00959-201ENST00000456581 UQCRQO14949 82 aa8.46□□□□□ -1.06
LINC00959-201ENST00000456581 PRB2P02812 416 aaPredicted RBP8.46□□□□□ -1.06
LINC00959-201ENST00000456581 A0A1B0GX51 115 aa8.45□□□□□ -1.06
LINC00959-201ENST00000456581 M0R2N4 97 aa8.45□□□□□ -1.06
LINC00959-201ENST00000456581 H0YGX0 51 aa8.45□□□□□ -1.06
LINC00959-201ENST00000456581 MIFP14174 115 aa8.44□□□□□ -1.06
LINC00959-201ENST00000456581 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
LINC00959-201ENST00000456581 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
LINC00959-201ENST00000456581 FAM19A1Q7Z5A9 133 aa8.44□□□□□ -1.06
LINC00959-201ENST00000456581 OBSCN-AS1Q96MR7 158 aa8.44□□□□□ -1.06
LINC00959-201ENST00000456581 SPART-AS1P0CW21 52 aa8.44□□□□□ -1.06
LINC00959-201ENST00000456581 COX7CP15954 63 aa8.44□□□□□ -1.06
LINC00959-201ENST00000456581 ORMDL1Q9P0S3 153 aa8.44□□□□□ -1.06
LINC00959-201ENST00000456581 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
LINC00959-201ENST00000456581 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
LINC00959-201ENST00000456581 CHCHD10Q8WYQ3 142 aaPredicted RBP8.43□□□□□ -1.06
LINC00959-201ENST00000456581 C6orf99Q4VX62 202 aa8.42□□□□□ -1.06
LINC00959-201ENST00000456581 DNAH3Q8TD57 4116 aa8.42□□□□□ -1.06
LINC00959-201ENST00000456581 A0A1B0GUV1 79 aa8.42□□□□□ -1.06
LINC00959-201ENST00000456581 Q8IZM0 81 aa8.42□□□□□ -1.06
LINC00959-201ENST00000456581 OXTP01178 125 aa8.41□□□□□ -1.06
LINC00959-201ENST00000456581 Q8N814 137 aa8.41□□□□□ -1.06
LINC00959-201ENST00000456581 STAB2Q8WWQ8 2551 aa8.4□□□□□ -1.06
LINC00959-201ENST00000456581 UNQ6190/PRO20217Q6UXQ8 127 aa8.4□□□□□ -1.06
LINC00959-201ENST00000456581 DSCR8Q96T75 97 aa8.4□□□□□ -1.06
LINC00959-201ENST00000456581 TRAV23DV6A0A075B6W5 121 aa8.39□□□□□ -1.07
LINC00959-201ENST00000456581 J3KT08 172 aa8.39□□□□□ -1.07
LINC00959-201ENST00000456581 REG3AQ06141 175 aa8.39□□□□□ -1.07
LINC00959-201ENST00000456581 RPL18AQ02543 176 aaKnown RBP8.39□□□□□ -1.07
LINC00959-201ENST00000456581 C5orf47Q569G3 176 aa8.39□□□□□ -1.07
LINC00959-201ENST00000456581 USP17L23D6RBM5 183 aa8.39□□□□□ -1.07
LINC00959-201ENST00000456581 CRYGAP11844 174 aa8.38□□□□□ -1.07
LINC00959-201ENST00000456581 Q6ZTC4 211 aa8.38□□□□□ -1.07
LINC00959-201ENST00000456581 EGFEM1PQ0D2K5 195 aa8.38□□□□□ -1.07
LINC00959-201ENST00000456581 ENHOQ6UWT2 76 aa8.38□□□□□ -1.07
LINC00959-201ENST00000456581 FAM19A5Q7Z5A7 132 aaPredicted RBP8.38□□□□□ -1.07
LINC00959-201ENST00000456581 CCKP06307 115 aa8.37□□□□□ -1.07
LINC00959-201ENST00000456581 UPK3BQ9BT76 320 aa8.37□□□□□ -1.07
LINC00959-201ENST00000456581 Q6JHZ5 121 aa8.37□□□□□ -1.07
LINC00959-201ENST00000456581 CD164L2Q6UWJ8 174 aa8.37□□□□□ -1.07
LINC00959-201ENST00000456581 COL7A1Q02388 2944 aa8.37□□□□□ -1.07
LINC00959-201ENST00000456581 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
LINC00959-201ENST00000456581 S100A7L2Q5SY68 101 aa8.36□□□□□ -1.07
LINC00959-201ENST00000456581 XAGE1AQ9HD64 81 aa8.36□□□□□ -1.07
LINC00959-201ENST00000456581 ATOX1O00244 68 aa8.35□□□□□ -1.07
LINC00959-201ENST00000456581 A0A0J9YWU9 116 aa8.35□□□□□ -1.07
LINC00959-201ENST00000456581 KLK12Q9UKR0 248 aa8.35□□□□□ -1.07
LINC00959-201ENST00000456581 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
LINC00959-201ENST00000456581 LELP1Q5T871 98 aa8.33□□□□□ -1.08
LINC00959-201ENST00000456581 KPRPQ5T749 579 aaPredicted RBP8.33□□□□□ -1.08
LINC00959-201ENST00000456581 LYPD5Q6UWN5 251 aa8.33□□□□□ -1.08
LINC00959-201ENST00000456581 MRAPQ8TCY5 172 aa8.33□□□□□ -1.08
LINC00959-201ENST00000456581 LINC00167Q96N53 147 aa8.33□□□□□ -1.08
LINC00959-201ENST00000456581 TENM2Q9NT68 2774 aa8.32□□□□□ -1.08
LINC00959-201ENST00000456581 WFDC10BQ8IUB3 73 aa8.32□□□□□ -1.08
LINC00959-201ENST00000456581 SERP2Q8N6R1 65 aa8.32□□□□□ -1.08
LINC00959-201ENST00000456581 TMEM256-PLSCR3K7ERE1 68 aa8.31□□□□□ -1.08
LINC00959-201ENST00000456581 LAMTOR3Q9UHA4 124 aa8.31□□□□□ -1.08
LINC00959-201ENST00000456581 HUWE1Q7Z6Z7 4374 aaKnown RBP8.31□□□□□ -1.08
LINC00959-201ENST00000456581 GHRHP01286 108 aa8.31□□□□□ -1.08
LINC00959-201ENST00000456581 LINC00575Q6W349 94 aa8.31□□□□□ -1.08
LINC00959-201ENST00000456581 SCXQ7RTU7 201 aa8.31□□□□□ -1.08
LINC00959-201ENST00000456581 Q6ZQY7 126 aa8.3□□□□□ -1.08
LINC00959-201ENST00000456581 DPH3Q96FX2 82 aa8.3□□□□□ -1.08
LINC00959-201ENST00000456581 HIGD2BQ4VC39 106 aa8.3□□□□□ -1.08
LINC00959-201ENST00000456581 NDUFC2O95298 119 aa8.29□□□□□ -1.08
LINC00959-201ENST00000456581 TRBV10-3A0A0K0K1G6 114 aa8.29□□□□□ -1.08
LINC00959-201ENST00000456581 JMJD7-PLA2G4BH0Y9G9 81 aa8.29□□□□□ -1.08
LINC00959-201ENST00000456581 LYSTQ99698 3801 aa8.28□□□□□ -1.08
LINC00959-201ENST00000456581 TRAV10A0A0B4J240 114 aa8.28□□□□□ -1.08
LINC00959-201ENST00000456581 COX17Q14061 63 aa8.28□□□□□ -1.08
LINC00959-201ENST00000456581 C4orf26Q17RF5 130 aa8.28□□□□□ -1.08
LINC00959-201ENST00000456581 C20orf197Q8N268 126 aa8.28□□□□□ -1.08
LINC00959-201ENST00000456581 TMEM258P61165 79 aa8.27□□□□□ -1.09
LINC00959-201ENST00000456581 ESRGQ1W209 222 aa8.27□□□□□ -1.09
LINC00959-201ENST00000456581 Q6ZQT0 140 aa8.27□□□□□ -1.09
LINC00959-201ENST00000456581 C6orf48Q9UBA6 75 aa8.27□□□□□ -1.09
LINC00959-201ENST00000456581 DEFB131BA0A096LNP1 70 aa8.26□□□□□ -1.09
LINC00959-201ENST00000456581 HAMPP81172 84 aa8.26□□□□□ -1.09
LINC00959-201ENST00000456581 RBM3P98179 157 aaKnown RBP8.26□□□□□ -1.09
LINC00959-201ENST00000456581 C11orf45Q8TAV5 145 aa8.26□□□□□ -1.09
LINC00959-201ENST00000456581 CSMD3Q7Z407 3707 aa8.26□□□□□ -1.09
LINC00959-201ENST00000456581 K7EIL1 84 aa8.25□□□□□ -1.09
LINC00959-201ENST00000456581 UBL5Q9BZL1 73 aa8.25□□□□□ -1.09
LINC00959-201ENST00000456581 PRR34Q9NV39 138 aa8.25□□□□□ -1.09
LINC00959-201ENST00000456581 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.24□□□□□ -1.09
LINC00959-201ENST00000456581 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
LINC00959-201ENST00000456581 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
LINC00959-201ENST00000456581 MDFIQ99750 246 aa8.23□□□□□ -1.09
LINC00959-201ENST00000456581 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
LINC00959-201ENST00000456581 LINC01547P58512 204 aaPredicted RBP8.22□□□□□ -1.09
LINC00959-201ENST00000456581 Q8N9L7 120 aa8.22□□□□□ -1.09
LINC00959-201ENST00000456581 Q6ZVQ6 151 aa8.22□□□□□ -1.09
LINC00959-201ENST00000456581 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.09
LINC00959-201ENST00000456581 H3BNG1 76 aa8.2□□□□□ -1.1
LINC00959-201ENST00000456581 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
LINC00959-201ENST00000456581 Q5XG85 94 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms