RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TTTY13Q9BZ97 58 aa3.74□□□□□ -1.81
CSMD3-204ENST00000455883 SPRNQ5BIV9 151 aa3.74□□□□□ -1.81
CSMD3-204ENST00000455883 LRBAP50851 2863 aa3.73□□□□□ -1.81
CSMD3-204ENST00000455883 ZNF843Q8N446 348 aa3.73□□□□□ -1.81
CSMD3-204ENST00000455883 C6orf48Q9UBA6 75 aa3.73□□□□□ -1.81
CSMD3-204ENST00000455883 IGLV1-51P01701 117 aa3.73□□□□□ -1.81
CSMD3-204ENST00000455883 PRO0461Q9UI25 63 aa3.73□□□□□ -1.81
CSMD3-204ENST00000455883 IGHV4-30-2A0A087WSY4 118 aa3.73□□□□□ -1.81
CSMD3-204ENST00000455883 DEFB136Q30KP8 78 aa3.73□□□□□ -1.81
CSMD3-204ENST00000455883 A8MUN3 132 aa3.72□□□□□ -1.81
CSMD3-204ENST00000455883 CRIP3Q6Q6R5 217 aa3.72□□□□□ -1.81
CSMD3-204ENST00000455883 LINC00846Q9NV44 126 aa3.72□□□□□ -1.81
CSMD3-204ENST00000455883 WFDC13Q8IUB5 93 aa3.72□□□□□ -1.81
CSMD3-204ENST00000455883 IGHV3OR16-9A0A0B4J2B5 98 aa3.72□□□□□ -1.81
CSMD3-204ENST00000455883 A0A0J9YWU9 116 aa3.72□□□□□ -1.81
CSMD3-204ENST00000455883 IGHV4-30-4P0DP06 118 aa3.72□□□□□ -1.81
CSMD3-204ENST00000455883 FHL3Q13643 280 aa3.71□□□□□ -1.81
CSMD3-204ENST00000455883 EDN2P20800 178 aa3.71□□□□□ -1.82
CSMD3-204ENST00000455883 LINC00337Q8N6G1 96 aa3.71□□□□□ -1.82
CSMD3-204ENST00000455883 LINC01556Q5JQF7 62 aa3.71□□□□□ -1.82
CSMD3-204ENST00000455883 C6orf223Q8N319 242 aa3.71□□□□□ -1.82
CSMD3-204ENST00000455883 Q6ZRP5 223 aa3.71□□□□□ -1.82
CSMD3-204ENST00000455883 C16orf95Q9H693 158 aa3.71□□□□□ -1.82
CSMD3-204ENST00000455883 Q6ZS46 218 aa3.71□□□□□ -1.82
CSMD3-204ENST00000455883 Q9BRP9 147 aa3.71□□□□□ -1.82
CSMD3-204ENST00000455883 Q6ZRX8 168 aa3.7□□□□□ -1.82
CSMD3-204ENST00000455883 Q6ZQT0 140 aa3.7□□□□□ -1.82
CSMD3-204ENST00000455883 NANOS2P60321 138 aaKnown RBP3.7□□□□□ -1.82
CSMD3-204ENST00000455883 LOC100131303A0A0U1RQF7 123 aa3.7□□□□□ -1.82
CSMD3-204ENST00000455883 PRB3Q04118 309 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-204ENST00000455883 A8MWP4 228 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 KIF25-AS1Q9Y6Z4 181 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 C10orf142B7Z368 130 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 A0A096LNJ9 63 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 A0A096LPF7 62 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 Q6ZPA2 131 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 FAM19A4Q96LR4 140 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 PDZD2O15018 2839 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 IGLV6-57P01721 117 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 IGLV4-60A0A075B6I1 120 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 CDSNQ15517 529 aa3.69□□□□□ -1.82
CSMD3-204ENST00000455883 PSPHP1O15172 72 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 WISP2O76076 250 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.68□□□□□ -1.82
CSMD3-204ENST00000455883 IGKV2-28A0A075B6P5 120 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 IGKV2D-28P01615 120 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 Q1T7F1 81 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 A0A087WYN8 130 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 C22orf34Q6ZV56 151 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 IGKV2-24A0A0C4DH68 120 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 IGHV4-31P0DP07 118 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 CEMP1Q6PRD7 247 aaPredicted RBP3.68□□□□□ -1.82
CSMD3-204ENST00000455883 Q8NA96 180 aa3.68□□□□□ -1.82
CSMD3-204ENST00000455883 ADAMTSL4-AS1Q5T5F5 129 aa3.67□□□□□ -1.82
CSMD3-204ENST00000455883 LCA10Q71F78 164 aa3.67□□□□□ -1.82
CSMD3-204ENST00000455883 TNP2Q05952 138 aa3.67□□□□□ -1.82
CSMD3-204ENST00000455883 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
CSMD3-204ENST00000455883 FRMD6-AS1P0C7T7 363 aa3.67□□□□□ -1.82
CSMD3-204ENST00000455883 SLPIP03973 132 aa3.66□□□□□ -1.82
CSMD3-204ENST00000455883 URB1-AS1Q96HZ7 61 aa3.66□□□□□ -1.82
CSMD3-204ENST00000455883 C9orf116Q5BN46 136 aaPredicted RBP3.66□□□□□ -1.82
CSMD3-204ENST00000455883 C19orf84I3L1E1 186 aa3.66□□□□□ -1.82
CSMD3-204ENST00000455883 A0A087WSZ3 146 aa3.66□□□□□ -1.82
CSMD3-204ENST00000455883 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.82
CSMD3-204ENST00000455883 PLA2G2DQ9UNK4 145 aa3.65□□□□□ -1.82
CSMD3-204ENST00000455883 AVPP01185 164 aa3.65□□□□□ -1.83
CSMD3-204ENST00000455883 DEFB104AQ8WTQ1 72 aa3.65□□□□□ -1.83
CSMD3-204ENST00000455883 FHL2Q14192 279 aa3.65□□□□□ -1.83
CSMD3-204ENST00000455883 SOSTDC1Q6X4U4 206 aa3.65□□□□□ -1.83
CSMD3-204ENST00000455883 IGHV6-1A0A0B4J1U7 121 aa3.65□□□□□ -1.83
CSMD3-204ENST00000455883 BBC3Q96PG8 261 aaPredicted RBP3.64□□□□□ -1.83
CSMD3-204ENST00000455883 ODF3L2Q3SX64 289 aa3.64□□□□□ -1.83
CSMD3-204ENST00000455883 C16orf90A8MZG2 172 aa3.64□□□□□ -1.83
CSMD3-204ENST00000455883 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
CSMD3-204ENST00000455883 CEP350Q5VT06 3117 aa3.64□□□□□ -1.83
CSMD3-204ENST00000455883 TSPEAR-AS2P59090 65 aa3.64□□□□□ -1.83
CSMD3-204ENST00000455883 C11orf21Q9P2W6 132 aa3.64□□□□□ -1.83
CSMD3-204ENST00000455883 UNQ6190/PRO20217Q6UXQ8 127 aa3.64□□□□□ -1.83
CSMD3-204ENST00000455883 PRR9Q5T870 116 aa3.64□□□□□ -1.83
CSMD3-204ENST00000455883 KCNQ1DNQ9H478 68 aa3.63□□□□□ -1.83
CSMD3-204ENST00000455883 LINC00167Q96N53 147 aa3.63□□□□□ -1.83
CSMD3-204ENST00000455883 TM2D3Q9BRN9 247 aa3.63□□□□□ -1.83
CSMD3-204ENST00000455883 A0A087X002 238 aa3.63□□□□□ -1.83
CSMD3-204ENST00000455883 SRCAPQ6ZRS2 3230 aa3.62□□□□□ -1.83
CSMD3-204ENST00000455883 A0A087WVE0 104 aa3.62□□□□□ -1.83
CSMD3-204ENST00000455883 DNAH10OSP0CZ25 163 aa3.62□□□□□ -1.83
CSMD3-204ENST00000455883 DMAC1Q96GE9 116 aa3.62□□□□□ -1.83
CSMD3-204ENST00000455883 SPINK6Q6UWN8 80 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 OBSCN-AS1Q96MR7 158 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 A8MTW9 85 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 H7BZZ5 65 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 SSBP3-AS1Q7Z2R9 100 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 LINC01006Q8NI28 216 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 EP400Q96L91 3159 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 IGLV5-52A0A0A0MRZ9 124 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 MSMPQ1L6U9 139 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 TLX1NBP0CAT3 122 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 SMIM29Q86T20 159 aa3.61□□□□□ -1.83
CSMD3-204ENST00000455883 LINC00313P59037 77 aa3.6□□□□□ -1.83
CSMD3-204ENST00000455883 EPM2AB3EWF7 344 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms