RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 NOP10Q9NPE3 64 aaKnown RBP6.67□□□□□ -1.34
LINC01940-201ENST00000455228 FLNCQ14315 2725 aa6.67□□□□□ -1.34
LINC01940-201ENST00000455228 LINC01547P58512 204 aaPredicted RBP6.67□□□□□ -1.34
LINC01940-201ENST00000455228 BBC3Q96PG8 261 aaPredicted RBP6.67□□□□□ -1.34
LINC01940-201ENST00000455228 SETD2Q9BYW2 2564 aaPredicted RBP6.67□□□□□ -1.34
LINC01940-201ENST00000455228 LINC00269Q8N2A0 174 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 LINC00337Q8N6G1 96 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 C4orf3Q8WVX3 66 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 UBL5Q9BZL1 73 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 ASB16-AS1Q495Z4 193 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 ZCCHC13Q8WW36 166 aaKnown RBP6.66□□□□□ -1.34
LINC01940-201ENST00000455228 JMJD1CQ15652 2540 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 CFAP46Q8IYW2 2715 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 PSCAO43653 123 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 WFDC9Q8NEX5 89 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 SMIM11BQ8TCY0 68 aa6.66□□□□□ -1.34
LINC01940-201ENST00000455228 A0A087WYN8 130 aa6.65□□□□□ -1.34
LINC01940-201ENST00000455228 NREPQ16612 68 aa6.65□□□□□ -1.34
LINC01940-201ENST00000455228 ITPR1Q14643 2758 aa6.65□□□□□ -1.35
LINC01940-201ENST00000455228 ODF3L2Q3SX64 289 aa6.65□□□□□ -1.35
LINC01940-201ENST00000455228 C9orf66Q5T8R8 295 aa6.64□□□□□ -1.35
LINC01940-201ENST00000455228 MXRA5Q9NR99 2828 aa6.64□□□□□ -1.35
LINC01940-201ENST00000455228 TRGV4A0A0C4DH28 118 aa6.64□□□□□ -1.35
LINC01940-201ENST00000455228 LECT2O14960 151 aa6.64□□□□□ -1.35
LINC01940-201ENST00000455228 LY6G6DO95868 133 aa6.64□□□□□ -1.35
LINC01940-201ENST00000455228 MTORP42345 2549 aa6.64□□□□□ -1.35
LINC01940-201ENST00000455228 SONP18583 2426 aaKnown RBP6.64□□□□□ -1.35
LINC01940-201ENST00000455228 ORMDL1Q9P0S3 153 aa6.64□□□□□ -1.35
LINC01940-201ENST00000455228 IGKV2-28A0A075B6P5 120 aa6.63□□□□□ -1.35
LINC01940-201ENST00000455228 IGKV2D-28P01615 120 aa6.63□□□□□ -1.35
LINC01940-201ENST00000455228 Q75L30 129 aa6.63□□□□□ -1.35
LINC01940-201ENST00000455228 C1orf64Q8NEQ6 169 aa6.63□□□□□ -1.35
LINC01940-201ENST00000455228 A8MU10 97 aa6.63□□□□□ -1.35
LINC01940-201ENST00000455228 CCL18P55774 89 aa6.63□□□□□ -1.35
LINC01940-201ENST00000455228 LOC101927531A0A1B0GV80 90 aa6.62□□□□□ -1.35
LINC01940-201ENST00000455228 Q6ZQT0 140 aa6.62□□□□□ -1.35
LINC01940-201ENST00000455228 CUBNO60494 3623 aa6.62□□□□□ -1.35
LINC01940-201ENST00000455228 UTP20O75691 2785 aaKnown RBP6.62□□□□□ -1.35
LINC01940-201ENST00000455228 NCR3O14931 201 aa6.62□□□□□ -1.35
LINC01940-201ENST00000455228 SLPIP03973 132 aa6.62□□□□□ -1.35
LINC01940-201ENST00000455228 CSMD2Q7Z408 3487 aa6.61□□□□□ -1.35
LINC01940-201ENST00000455228 IGHV4-31P0DP07 118 aa6.61□□□□□ -1.35
LINC01940-201ENST00000455228 TRBV6-8A0A0A6YYG3 113 aa6.6□□□□□ -1.35
LINC01940-201ENST00000455228 NKAPP1Q8N9T2 125 aa6.6□□□□□ -1.35
LINC01940-201ENST00000455228 IGLV4-60A0A075B6I1 120 aa6.6□□□□□ -1.35
LINC01940-201ENST00000455228 Q8N3U1 123 aa6.6□□□□□ -1.35
LINC01940-201ENST00000455228 TEX15Q9BXT5 2789 aa6.6□□□□□ -1.35
LINC01940-201ENST00000455228 C16orf74Q96GX8 76 aa6.59□□□□□ -1.35
LINC01940-201ENST00000455228 CDC42SE1Q9NRR8 79 aa6.59□□□□□ -1.35
LINC01940-201ENST00000455228 TRBV6-4A0A1B0GX49 114 aa6.59□□□□□ -1.35
LINC01940-201ENST00000455228 LINC00313P59037 77 aa6.59□□□□□ -1.35
LINC01940-201ENST00000455228 LIMD2Q9BT23 127 aa6.59□□□□□ -1.35
LINC01940-201ENST00000455228 IGHV3OR16-9A0A0B4J2B5 98 aa6.59□□□□□ -1.36
LINC01940-201ENST00000455228 A0A096LNT2 108 aa6.58□□□□□ -1.36
LINC01940-201ENST00000455228 BAHCC1Q9P281 2608 aa6.58□□□□□ -1.36
LINC01940-201ENST00000455228 RNASE1P07998 156 aaKnown RBP6.58□□□□□ -1.36
LINC01940-201ENST00000455228 C3orf84H3BNL1 204 aa6.57□□□□□ -1.36
LINC01940-201ENST00000455228 FSHBP01225 129 aa6.57□□□□□ -1.36
LINC01940-201ENST00000455228 FN1P02751 2386 aaKnown RBP6.57□□□□□ -1.36
LINC01940-201ENST00000455228 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
LINC01940-201ENST00000455228 WFDC10AQ9H1F0 79 aa6.56□□□□□ -1.36
LINC01940-201ENST00000455228 FBN2P35556 2912 aa6.56□□□□□ -1.36
LINC01940-201ENST00000455228 SETXQ7Z333 2677 aaKnown RBP6.56□□□□□ -1.36
LINC01940-201ENST00000455228 TEP1Q99973 2627 aaKnown RBP6.56□□□□□ -1.36
LINC01940-201ENST00000455228 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
LINC01940-201ENST00000455228 BPY2O14599 106 aa6.56□□□□□ -1.36
LINC01940-201ENST00000455228 DEFB130BP0DP73 79 aa6.56□□□□□ -1.36
LINC01940-201ENST00000455228 DEFB130AP0DP74 79 aa6.56□□□□□ -1.36
LINC01940-201ENST00000455228 PLA2G2AP14555 144 aa6.56□□□□□ -1.36
LINC01940-201ENST00000455228 ELOF1P60002 83 aaKnown RBP6.56□□□□□ -1.36
LINC01940-201ENST00000455228 PDE6GP18545 87 aa6.56□□□□□ -1.36
LINC01940-201ENST00000455228 CLPSL2Q6UWE3 100 aa6.56□□□□□ -1.36
LINC01940-201ENST00000455228 GCN1Q92616 2671 aaKnown RBP6.56□□□□□ -1.36
LINC01940-201ENST00000455228 LINC00959A0A1B0GUT2 108 aa6.55□□□□□ -1.36
LINC01940-201ENST00000455228 ACANP16112 2415 aa6.55□□□□□ -1.36
LINC01940-201ENST00000455228 PSPHP1O15172 72 aa6.55□□□□□ -1.36
LINC01940-201ENST00000455228 CMC4P56277 68 aaPredicted RBP6.55□□□□□ -1.36
LINC01940-201ENST00000455228 PLAC8Q9NZF1 115 aa6.55□□□□□ -1.36
LINC01940-201ENST00000455228 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
LINC01940-201ENST00000455228 MDFIQ99750 246 aa6.54□□□□□ -1.36
LINC01940-201ENST00000455228 Q9BRP9 147 aa6.53□□□□□ -1.36
LINC01940-201ENST00000455228 GIG44P09565 113 aaPredicted RBP6.53□□□□□ -1.36
LINC01940-201ENST00000455228 PRR3P79522 188 aaKnown RBP6.53□□□□□ -1.36
LINC01940-201ENST00000455228 NF1P21359 2839 aa6.53□□□□□ -1.36
LINC01940-201ENST00000455228 H3BQ85 93 aa6.52□□□□□ -1.37
LINC01940-201ENST00000455228 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
LINC01940-201ENST00000455228 GYPEP15421 78 aa6.52□□□□□ -1.37
LINC01940-201ENST00000455228 A0A096LPF7 62 aa6.52□□□□□ -1.37
LINC01940-201ENST00000455228 A0A0A0MQY5 61 aa6.52□□□□□ -1.37
LINC01940-201ENST00000455228 Q8N814 137 aa6.52□□□□□ -1.37
LINC01940-201ENST00000455228 CR1P17927 2039 aa6.51□□□□□ -1.37
LINC01940-201ENST00000455228 MOBPQ13875 183 aa6.51□□□□□ -1.37
LINC01940-201ENST00000455228 Q8IZM0 81 aa6.51□□□□□ -1.37
LINC01940-201ENST00000455228 DNAJC9-AS1A6NH13 148 aa6.51□□□□□ -1.37
LINC01940-201ENST00000455228 H0Y9J4 135 aa6.51□□□□□ -1.37
LINC01940-201ENST00000455228 NIPBLQ6KC79 2804 aaeCLIP6.5□□□□□ -1.37
LINC01940-201ENST00000455228 KRTAP10-9P60411 292 aa6.5□□□□□ -1.37
LINC01940-201ENST00000455228 DEFB113Q30KQ7 82 aa6.5□□□□□ -1.37
LINC01940-201ENST00000455228 MAST4O15021 2626 aa6.49□□□□□ -1.37
LINC01940-201ENST00000455228 IGLV10-54A0A075B6I4 117 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms