RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 GNB1LQ9BYB4 327 aa4.66□□□□□ -1.66
NIF3L1-209ENST00000454952 RAB5BP61020 215 aa4.65□□□□□ -1.67
NIF3L1-209ENST00000454952 RPL24P83731 157 aaKnown RBP4.65□□□□□ -1.67
NIF3L1-209ENST00000454952 RETNLBQ9BQ08 111 aa4.65□□□□□ -1.67
NIF3L1-209ENST00000454952 ANAPC11Q9NYG5 84 aa4.65□□□□□ -1.67
NIF3L1-209ENST00000454952 IGKV2-28A0A075B6P5 120 aa4.64□□□□□ -1.67
NIF3L1-209ENST00000454952 IGKV2D-28P01615 120 aa4.64□□□□□ -1.67
NIF3L1-209ENST00000454952 PMVKQ15126 192 aa4.64□□□□□ -1.67
NIF3L1-209ENST00000454952 SFTA2Q6UW10 78 aa4.64□□□□□ -1.67
NIF3L1-209ENST00000454952 FP248Q71RG6 208 aaPredicted RBP4.64□□□□□ -1.67
NIF3L1-209ENST00000454952 FAM19A1Q7Z5A9 133 aa4.64□□□□□ -1.67
NIF3L1-209ENST00000454952 CST9LQ9H4G1 147 aa4.64□□□□□ -1.67
NIF3L1-209ENST00000454952 TRAV9-1A0A075B6T8 112 aa4.63□□□□□ -1.67
NIF3L1-209ENST00000454952 COX17Q14061 63 aa4.63□□□□□ -1.67
NIF3L1-209ENST00000454952 TMEM126AQ9H061 195 aa4.63□□□□□ -1.67
NIF3L1-209ENST00000454952 PPDPFQ9H3Y8 114 aa4.63□□□□□ -1.67
NIF3L1-209ENST00000454952 SPINK8P0C7L1 97 aa4.62□□□□□ -1.67
NIF3L1-209ENST00000454952 PFN2P35080 140 aa4.62□□□□□ -1.67
NIF3L1-209ENST00000454952 RAB14P61106 215 aa4.62□□□□□ -1.67
NIF3L1-209ENST00000454952 PRLHP81277 87 aa4.62□□□□□ -1.67
NIF3L1-209ENST00000454952 CBLN2Q8IUK8 224 aa4.62□□□□□ -1.67
NIF3L1-209ENST00000454952 LINC00337Q8N6G1 96 aa4.62□□□□□ -1.67
NIF3L1-209ENST00000454952 ZNF706Q9Y5V0 76 aaPredicted RBP4.62□□□□□ -1.67
NIF3L1-209ENST00000454952 LINC01546A6NGU7 62 aa4.61□□□□□ -1.67
NIF3L1-209ENST00000454952 VPREB1P12018 145 aa4.61□□□□□ -1.67
NIF3L1-209ENST00000454952 ADCYAP1P18509 176 aa4.61□□□□□ -1.67
NIF3L1-209ENST00000454952 FA2HQ7L5A8 372 aa4.61□□□□□ -1.67
NIF3L1-209ENST00000454952 PLEKHB2Q96CS7 222 aa4.61□□□□□ -1.67
NIF3L1-209ENST00000454952 SND1-IT1Q9HBX3 110 aa4.61□□□□□ -1.67
NIF3L1-209ENST00000454952 SMCO4Q9NRQ5 59 aa4.61□□□□□ -1.67
NIF3L1-209ENST00000454952 ERG28Q9UKR5 140 aa4.61□□□□□ -1.67
NIF3L1-209ENST00000454952 TMEM238C9JI98 176 aa4.6□□□□□ -1.67
NIF3L1-209ENST00000454952 M0R378 163 aa4.6□□□□□ -1.67
NIF3L1-209ENST00000454952 PRYO14603 147 aa4.6□□□□□ -1.67
NIF3L1-209ENST00000454952 KIAA1644Q3SXP7 199 aa4.6□□□□□ -1.67
NIF3L1-209ENST00000454952 COX19Q49B96 90 aa4.6□□□□□ -1.67
NIF3L1-209ENST00000454952 IGLV5-39A0A0G2JS06 123 aa4.59□□□□□ -1.67
NIF3L1-209ENST00000454952 SCO1O75880 301 aa4.59□□□□□ -1.67
NIF3L1-209ENST00000454952 IGLC3P0DOY3 106 aa4.59□□□□□ -1.67
NIF3L1-209ENST00000454952 S100PP25815 95 aa4.59□□□□□ -1.67
NIF3L1-209ENST00000454952 LINC01547P58512 204 aaPredicted RBP4.59□□□□□ -1.67
NIF3L1-209ENST00000454952 HIGD2AQ9BW72 106 aa4.59□□□□□ -1.67
NIF3L1-209ENST00000454952 NDUFA12Q9UI09 145 aa4.59□□□□□ -1.67
NIF3L1-209ENST00000454952 A0A1B0GVG6 124 aa4.58□□□□□ -1.68
NIF3L1-209ENST00000454952 PCP4P48539 62 aa4.58□□□□□ -1.68
NIF3L1-209ENST00000454952 SEC61BP60468 96 aaKnown RBP4.58□□□□□ -1.68
NIF3L1-209ENST00000454952 SPRR4Q96PI1 79 aa4.58□□□□□ -1.68
NIF3L1-209ENST00000454952 FAT4Q6V0I7 4981 aa4.57□□□□□ -1.68
NIF3L1-209ENST00000454952 SPINK1P00995 79 aa4.57□□□□□ -1.68
NIF3L1-209ENST00000454952 NDUFA6P56556 154 aa4.57□□□□□ -1.68
NIF3L1-209ENST00000454952 ASB16-AS1Q495Z4 193 aa4.57□□□□□ -1.68
NIF3L1-209ENST00000454952 FAM19A2Q8N3H0 131 aa4.57□□□□□ -1.68
NIF3L1-209ENST00000454952 C3orf22Q8N5N4 141 aa4.57□□□□□ -1.68
NIF3L1-209ENST00000454952 ZNF22P17026 224 aaPredicted RBP4.56□□□□□ -1.68
NIF3L1-209ENST00000454952 S100A12P80511 92 aa4.56□□□□□ -1.68
NIF3L1-209ENST00000454952 KRTAP13-3Q3SY46 172 aa4.56□□□□□ -1.68
NIF3L1-209ENST00000454952 PET117Q6UWS5 81 aa4.56□□□□□ -1.68
NIF3L1-209ENST00000454952 Q8NBF4 154 aa4.56□□□□□ -1.68
NIF3L1-209ENST00000454952 ATP6V1G1O75348 118 aa4.55□□□□□ -1.68
NIF3L1-209ENST00000454952 LINC00158P58513 81 aa4.55□□□□□ -1.68
NIF3L1-209ENST00000454952 FABP9Q0Z7S8 132 aa4.55□□□□□ -1.68
NIF3L1-209ENST00000454952 UQCC3Q6UW78 93 aa4.55□□□□□ -1.68
NIF3L1-209ENST00000454952 ZNF625Q96I27 306 aaPredicted RBP4.55□□□□□ -1.68
NIF3L1-209ENST00000454952 LINC00587B1AMM8 73 aa4.54□□□□□ -1.68
NIF3L1-209ENST00000454952 HBDP02042 147 aa4.54□□□□□ -1.68
NIF3L1-209ENST00000454952 RPS29P62273 56 aaKnown RBP4.54□□□□□ -1.68
NIF3L1-209ENST00000454952 TMEM170BQ5T4T1 132 aa4.54□□□□□ -1.68
NIF3L1-209ENST00000454952 DAND5Q8N907 189 aa4.54□□□□□ -1.68
NIF3L1-209ENST00000454952 SEC11CQ9BY50 192 aa4.54□□□□□ -1.68
NIF3L1-209ENST00000454952 ETDCA0A1B0GVM5 59 aa4.53□□□□□ -1.68
NIF3L1-209ENST00000454952 LINC00614P0C842 121 aa4.53□□□□□ -1.68
NIF3L1-209ENST00000454952 BAGE3Q86Y29 109 aa4.53□□□□□ -1.68
NIF3L1-209ENST00000454952 KCNQ1DNQ9H478 68 aa4.53□□□□□ -1.68
NIF3L1-209ENST00000454952 TMEM218A2RU14 115 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 C11orf86A6NJI1 115 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 SLC25A20O43772 301 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 SPRR1AP35321 89 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 HERV-K104P63124 156 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 LINC00483Q53H64 154 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 CLLU1Q5K131 121 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 SSBP3-AS1Q7Z2R9 100 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 BOD1L2Q8IYS8 172 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 Q8NDZ9 215 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 SMCR5Q8TEV8 140 aa4.52□□□□□ -1.69
NIF3L1-209ENST00000454952 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
NIF3L1-209ENST00000454952 MEIG1Q5JSS6 88 aa4.51□□□□□ -1.69
NIF3L1-209ENST00000454952 MAP1LC3CQ9BXW4 147 aa4.51□□□□□ -1.69
NIF3L1-209ENST00000454952 CHTOPQ9Y3Y2 248 aaKnown RBP4.51□□□□□ -1.69
NIF3L1-209ENST00000454952 A0A096LNJ9 63 aa4.5□□□□□ -1.69
NIF3L1-209ENST00000454952 A4D1N5 150 aa4.5□□□□□ -1.69
NIF3L1-209ENST00000454952 RHEBQ15382 184 aa4.5□□□□□ -1.69
NIF3L1-209ENST00000454952 TRAV12-1A0A0B4J245 112 aa4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 A0A0U1RRA0 63 aa4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 TMEM223A0PJW6 202 aa4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 KRTAP4-16G5E9R7 235 aaPredicted RBP4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 NCR3O14931 201 aa4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 SMIM13P0DJ93 91 aa4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 MOBPQ13875 183 aa4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 GAGE2AQ6NT46 116 aa4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 Q8N377 158 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms