RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-210ENST00000453744 MRAPQ8TCY5 172 aa9.58□□□□□ -0.88
UBE2D3-210ENST00000453744 MPLKIPQ8TAP9 179 aa9.58□□□□□ -0.88
UBE2D3-210ENST00000453744 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
UBE2D3-210ENST00000453744 Q6ZVQ6 151 aa9.57□□□□□ -0.88
UBE2D3-210ENST00000453744 CYSRT1A8MQ03 144 aa9.57□□□□□ -0.88
UBE2D3-210ENST00000453744 LINC01547P58512 204 aaPredicted RBP9.57□□□□□ -0.88
UBE2D3-210ENST00000453744 TRAV10A0A0B4J240 114 aa9.56□□□□□ -0.88
UBE2D3-210ENST00000453744 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
UBE2D3-210ENST00000453744 CAMK2N2Q96S95 79 aa9.56□□□□□ -0.88
UBE2D3-210ENST00000453744 GIG44P09565 113 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-210ENST00000453744 LINC00575Q6W349 94 aa9.56□□□□□ -0.88
UBE2D3-210ENST00000453744 Q8N9L7 120 aa9.56□□□□□ -0.88
UBE2D3-210ENST00000453744 BAHCC1Q9P281 2608 aa9.56□□□□□ -0.88
UBE2D3-210ENST00000453744 TRBV10-3A0A0K0K1G6 114 aa9.56□□□□□ -0.88
UBE2D3-210ENST00000453744 TRAV7A0A075B6U4 112 aa9.55□□□□□ -0.88
UBE2D3-210ENST00000453744 C3orf84H3BNL1 204 aa9.55□□□□□ -0.88
UBE2D3-210ENST00000453744 M0R2N4 97 aa9.55□□□□□ -0.88
UBE2D3-210ENST00000453744 COX7BP24311 80 aa9.55□□□□□ -0.88
UBE2D3-210ENST00000453744 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
UBE2D3-210ENST00000453744 CSMD2Q7Z408 3487 aa9.55□□□□□ -0.88
UBE2D3-210ENST00000453744 A0A0U1RQV1 116 aa9.54□□□□□ -0.88
UBE2D3-210ENST00000453744 PLAC8L1A1L4L8 177 aa9.54□□□□□ -0.88
UBE2D3-210ENST00000453744 NREPQ16612 68 aa9.54□□□□□ -0.88
UBE2D3-210ENST00000453744 IL17DQ8TAD2 202 aa9.54□□□□□ -0.88
UBE2D3-210ENST00000453744 IGLV1-51P01701 117 aa9.53□□□□□ -0.88
UBE2D3-210ENST00000453744 COL6A5A8TX70 2615 aa9.52□□□□□ -0.89
UBE2D3-210ENST00000453744 NIPBLQ6KC79 2804 aaeCLIP9.52□□□□□ -0.89
UBE2D3-210ENST00000453744 UBR5O95071 2799 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-210ENST00000453744 OXTP01178 125 aa9.51□□□□□ -0.89
UBE2D3-210ENST00000453744 COX17Q14061 63 aa9.51□□□□□ -0.89
UBE2D3-210ENST00000453744 Q6ZQT0 140 aa9.5□□□□□ -0.89
UBE2D3-210ENST00000453744 A0A096LNT2 108 aa9.5□□□□□ -0.89
UBE2D3-210ENST00000453744 A0A1B0GUV1 79 aa9.5□□□□□ -0.89
UBE2D3-210ENST00000453744 NANOS2P60321 138 aaKnown RBP9.5□□□□□ -0.89
UBE2D3-210ENST00000453744 OBSCN-AS1Q96MR7 158 aa9.5□□□□□ -0.89
UBE2D3-210ENST00000453744 LY6G6DO95868 133 aa9.5□□□□□ -0.89
UBE2D3-210ENST00000453744 SMR3AQ99954 134 aa9.5□□□□□ -0.89
UBE2D3-210ENST00000453744 UNC79Q9P2D8 2635 aa9.5□□□□□ -0.89
UBE2D3-210ENST00000453744 APCP25054 2843 aa9.49□□□□□ -0.89
UBE2D3-210ENST00000453744 VPS13CQ709C8 3753 aa9.49□□□□□ -0.89
UBE2D3-210ENST00000453744 ZNF73O43830 326 aaPredicted RBP9.49□□□□□ -0.89
UBE2D3-210ENST00000453744 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
UBE2D3-210ENST00000453744 NOTCH1P46531 2555 aa9.49□□□□□ -0.89
UBE2D3-210ENST00000453744 PDE6GP18545 87 aa9.49□□□□□ -0.89
UBE2D3-210ENST00000453744 SERP1Q9Y6X1 66 aa9.49□□□□□ -0.89
UBE2D3-210ENST00000453744 CR1P17927 2039 aa9.49□□□□□ -0.89
UBE2D3-210ENST00000453744 FSHBP01225 129 aa9.48□□□□□ -0.89
UBE2D3-210ENST00000453744 TM2D3Q9BRN9 247 aa9.48□□□□□ -0.89
UBE2D3-210ENST00000453744 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
UBE2D3-210ENST00000453744 MIFP14174 115 aa9.47□□□□□ -0.89
UBE2D3-210ENST00000453744 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
UBE2D3-210ENST00000453744 CELA1Q9UNI1 258 aa9.47□□□□□ -0.89
UBE2D3-210ENST00000453744 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
UBE2D3-210ENST00000453744 LRCOL1A6NCL2 159 aa9.47□□□□□ -0.89
UBE2D3-210ENST00000453744 BPY2O14599 106 aa9.47□□□□□ -0.89
UBE2D3-210ENST00000453744 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.47□□□□□ -0.89
UBE2D3-210ENST00000453744 NDUFC2-KCTD14E9PQ53 114 aa9.46□□□□□ -0.89
UBE2D3-210ENST00000453744 KIAA0087Q14695 138 aa9.45□□□□□ -0.9
UBE2D3-210ENST00000453744 CSNK1G2-AS1Q8NCQ2 148 aa9.45□□□□□ -0.9
UBE2D3-210ENST00000453744 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
UBE2D3-210ENST00000453744 SMIM26A0A096LP01 95 aa9.44□□□□□ -0.9
UBE2D3-210ENST00000453744 Q8NDZ9 215 aa9.44□□□□□ -0.9
UBE2D3-210ENST00000453744 APOC4P55056 127 aa9.44□□□□□ -0.9
UBE2D3-210ENST00000453744 PRR4Q16378 134 aa9.43□□□□□ -0.9
UBE2D3-210ENST00000453744 INAFM1C9JVW0 142 aa9.43□□□□□ -0.9
UBE2D3-210ENST00000453744 H7BZZ5 65 aa9.43□□□□□ -0.9
UBE2D3-210ENST00000453744 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
UBE2D3-210ENST00000453744 LINC00474Q9P2X8 69 aa9.42□□□□□ -0.9
UBE2D3-210ENST00000453744 TRBV7-6A0A0J9YX20 115 aa9.41□□□□□ -0.9
UBE2D3-210ENST00000453744 TMEM254Q8TBM7 123 aa9.41□□□□□ -0.9
UBE2D3-210ENST00000453744 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
UBE2D3-210ENST00000453744 C19orf73Q9NVV2 129 aa9.41□□□□□ -0.9
UBE2D3-210ENST00000453744 ITPR2Q14571 2701 aa9.41□□□□□ -0.9
UBE2D3-210ENST00000453744 LINC00336Q6ZUF6 198 aa9.4□□□□□ -0.9
UBE2D3-210ENST00000453744 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.9
UBE2D3-210ENST00000453744 X6R8D5 127 aa9.4□□□□□ -0.9
UBE2D3-210ENST00000453744 C6orf48Q9UBA6 75 aa9.39□□□□□ -0.91
UBE2D3-210ENST00000453744 Q5XG85 94 aa9.39□□□□□ -0.91
UBE2D3-210ENST00000453744 LELP1Q5T871 98 aa9.38□□□□□ -0.91
UBE2D3-210ENST00000453744 LINC00167Q96N53 147 aa9.38□□□□□ -0.91
UBE2D3-210ENST00000453744 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
UBE2D3-210ENST00000453744 RPL37AP8A6NKH3 93 aa9.37□□□□□ -0.91
UBE2D3-210ENST00000453744 CXCL6P80162 114 aa9.37□□□□□ -0.91
UBE2D3-210ENST00000453744 H3BQ85 93 aa9.36□□□□□ -0.91
UBE2D3-210ENST00000453744 NDUFC1O43677 76 aa9.36□□□□□ -0.91
UBE2D3-210ENST00000453744 ETDCA0A1B0GVM5 59 aa9.35□□□□□ -0.91
UBE2D3-210ENST00000453744 UBE2BP63146 152 aa9.35□□□□□ -0.91
UBE2D3-210ENST00000453744 C9orf66Q5T8R8 295 aa9.35□□□□□ -0.91
UBE2D3-210ENST00000453744 M0R378 163 aa9.35□□□□□ -0.91
UBE2D3-210ENST00000453744 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
UBE2D3-210ENST00000453744 Q6ZRU5 148 aa9.34□□□□□ -0.91
UBE2D3-210ENST00000453744 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
UBE2D3-210ENST00000453744 IGLV6-57P01721 117 aa9.34□□□□□ -0.91
UBE2D3-210ENST00000453744 PRO0628Q9UI54 55 aa9.33□□□□□ -0.92
UBE2D3-210ENST00000453744 PRYO14603 147 aa9.33□□□□□ -0.92
UBE2D3-210ENST00000453744 KLKP1Q107X0 134 aa9.32□□□□□ -0.92
UBE2D3-210ENST00000453744 KPRPQ5T749 579 aaPredicted RBP9.3□□□□□ -0.92
UBE2D3-210ENST00000453744 LYPD5Q6UWN5 251 aa9.3□□□□□ -0.92
UBE2D3-210ENST00000453744 A0A0J9YWU9 116 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms