RNA–Protein interactions for RNA: ENST00000453615.1

PSMD4-206, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 3

Gene PSMD4, Length 371 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-206	ENST00000453615	PMCHL1	Q16048	86 aa		5.06	□□□□□ -1.6
PSMD4-206	ENST00000453615	FAM19A1	Q7Z5A9	133 aa		5.06	□□□□□ -1.6
PSMD4-206	ENST00000453615	KRTAP13-1	Q8IUC0	172 aa		5.06	□□□□□ -1.6
PSMD4-206	ENST00000453615	ZNF625	Q96I27	306 aa	Predicted RBP	5.06	□□□□□ -1.6
PSMD4-206	ENST00000453615	TMEM126A	Q9H061	195 aa		5.06	□□□□□ -1.6
PSMD4-206	ENST00000453615	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.06	□□□□□ -1.6
PSMD4-206	ENST00000453615	MUC2	Q02817	5179 aa		5.05	□□□□□ -1.6
PSMD4-206	ENST00000453615		A0A0U1RQV1	116 aa		5.05	□□□□□ -1.6
PSMD4-206	ENST00000453615	ANAPC11	Q9NYG5	84 aa		5.05	□□□□□ -1.6
PSMD4-206	ENST00000453615	TMEM238	C9JI98	176 aa		5.04	□□□□□ -1.6
PSMD4-206	ENST00000453615	PRLH	P81277	87 aa		5.04	□□□□□ -1.6
PSMD4-206	ENST00000453615	LINC00304	Q8N9R0	145 aa		5.04	□□□□□ -1.6
PSMD4-206	ENST00000453615	CHCHD1	Q96BP2	118 aa	Known RBP	5.04	□□□□□ -1.6
PSMD4-206	ENST00000453615	URB1-AS1	Q96HZ7	61 aa		5.04	□□□□□ -1.6
PSMD4-206	ENST00000453615	TRAV12-1	A0A0B4J245	112 aa		5.03	□□□□□ -1.6
PSMD4-206	ENST00000453615	LINC00587	B1AMM8	73 aa		5.03	□□□□□ -1.6
PSMD4-206	ENST00000453615		M0R378	163 aa		5.03	□□□□□ -1.6
PSMD4-206	ENST00000453615	CTAG1A	P78358	180 aa		5.03	□□□□□ -1.6
PSMD4-206	ENST00000453615	IFI27L1	Q96BM0	104 aa		5.03	□□□□□ -1.6
PSMD4-206	ENST00000453615	YPEL4	Q96NS1	127 aa		5.03	□□□□□ -1.6
PSMD4-206	ENST00000453615	TMEM223	A0PJW6	202 aa		5.02	□□□□□ -1.61
PSMD4-206	ENST00000453615	S100A6	P06703	90 aa		5.02	□□□□□ -1.61
PSMD4-206	ENST00000453615	HERV-K104	P63124	156 aa		5.02	□□□□□ -1.61
PSMD4-206	ENST00000453615	S100A12	P80511	92 aa		5.02	□□□□□ -1.61
PSMD4-206	ENST00000453615	KRTAP13-2	Q52LG2	175 aa		5.02	□□□□□ -1.61
PSMD4-206	ENST00000453615	MEIG1	Q5JSS6	88 aa		5.02	□□□□□ -1.61
PSMD4-206	ENST00000453615	HIGD2A	Q9BW72	106 aa		5.02	□□□□□ -1.61
PSMD4-206	ENST00000453615	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.02	□□□□□ -1.61
PSMD4-206	ENST00000453615		A0A0U1RRA0	63 aa		5.01	□□□□□ -1.61
PSMD4-206	ENST00000453615	C5orf52	A6NGY3	159 aa		5.01	□□□□□ -1.61
PSMD4-206	ENST00000453615	HSBP1	O75506	76 aa		5.01	□□□□□ -1.61
PSMD4-206	ENST00000453615	BOD1L2	Q8IYS8	172 aa		5.01	□□□□□ -1.61
PSMD4-206	ENST00000453615	LINC00518	Q8N0U6	118 aa		5.01	□□□□□ -1.61
PSMD4-206	ENST00000453615	PLEKHB2	Q96CS7	222 aa		5.01	□□□□□ -1.61
PSMD4-206	ENST00000453615	MAP1LC3C	Q9BXW4	147 aa		5.01	□□□□□ -1.61
PSMD4-206	ENST00000453615	MYMX	A0A1B0GTQ4	84 aa		5	□□□□□ -1.61
PSMD4-206	ENST00000453615	ETDC	A0A1B0GVM5	59 aa		4.99	□□□□□ -1.61
PSMD4-206	ENST00000453615	PRY	O14603	147 aa		4.99	□□□□□ -1.61
PSMD4-206	ENST00000453615	SMIM13	P0DJ93	91 aa		4.99	□□□□□ -1.61
PSMD4-206	ENST00000453615	SNRPE	P62304	92 aa	Known RBP	4.99	□□□□□ -1.61
PSMD4-206	ENST00000453615	C4orf48	Q5BLP8	95 aa		4.99	□□□□□ -1.61
PSMD4-206	ENST00000453615	SPAG11A	Q6PDA7	123 aa		4.99	□□□□□ -1.61
PSMD4-206	ENST00000453615		Q8NDZ9	215 aa		4.99	□□□□□ -1.61
PSMD4-206	ENST00000453615	CDIP1	Q9H305	208 aa		4.99	□□□□□ -1.61
PSMD4-206	ENST00000453615	NDUFA12	Q9UI09	145 aa		4.99	□□□□□ -1.61
PSMD4-206	ENST00000453615	IGLV7-46	A0A075B6I9	117 aa		4.98	□□□□□ -1.61
PSMD4-206	ENST00000453615		H0Y8G0	127 aa		4.98	□□□□□ -1.61
PSMD4-206	ENST00000453615	NCR3	O14931	201 aa		4.98	□□□□□ -1.61
PSMD4-206	ENST00000453615	PLN	P26678	52 aa		4.98	□□□□□ -1.61
PSMD4-206	ENST00000453615	AKR1D1	P51857	326 aa		4.98	□□□□□ -1.61
PSMD4-206	ENST00000453615	MIR7-3HG	Q8N6C7	128 aa		4.98	□□□□□ -1.61
PSMD4-206	ENST00000453615	LINC00337	Q8N6G1	96 aa		4.98	□□□□□ -1.61
PSMD4-206	ENST00000453615	RETNLB	Q9BQ08	111 aa		4.98	□□□□□ -1.61
PSMD4-206	ENST00000453615	SMIM6	P0DI80	62 aa		4.97	□□□□□ -1.61
PSMD4-206	ENST00000453615	HERVK_113	P61574	105 aa		4.97	□□□□□ -1.61
PSMD4-206	ENST00000453615	FAM19A2	Q8N3H0	131 aa		4.97	□□□□□ -1.61
PSMD4-206	ENST00000453615	SPRR4	Q96PI1	79 aa		4.97	□□□□□ -1.61
PSMD4-206	ENST00000453615	MIEN1	Q9BRT3	115 aa		4.97	□□□□□ -1.61
PSMD4-206	ENST00000453615	KCNQ1DN	Q9H478	68 aa		4.97	□□□□□ -1.61
PSMD4-206	ENST00000453615	LEPROTL1	O95214	131 aa		4.96	□□□□□ -1.62
PSMD4-206	ENST00000453615	TPRXL	Q17RH7	258 aa		4.96	□□□□□ -1.62
PSMD4-206	ENST00000453615	C3orf22	Q8N5N4	141 aa		4.96	□□□□□ -1.62
PSMD4-206	ENST00000453615	C12orf57	Q99622	126 aa		4.96	□□□□□ -1.62
PSMD4-206	ENST00000453615	HSPB8	Q9UJY1	196 aa		4.96	□□□□□ -1.62
PSMD4-206	ENST00000453615	LEPROT	O15243	131 aa		4.95	□□□□□ -1.62
PSMD4-206	ENST00000453615	TRGC2	P03986	189 aa		4.95	□□□□□ -1.62
PSMD4-206	ENST00000453615	TRBV10-3	A0A0K0K1G6	114 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	TRBV10-2	A0A0K0K1G8	114 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615		J3QQQ9	107 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST1H2BK	O60814	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	DPM2	O94777	84 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST1H2BJ	P06899	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	LGALS3	P17931	250 aa	Known RBP	4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST1H2BO	P23527	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	S100A2	P29034	98 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST1H2BB	P33778	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	SPRR1A	P35321	89 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	NMU	P48645	174 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST1H2BD	P58876	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST1H2BC	P62807	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST2H2BE	Q16778	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	FP248	Q71RG6	208 aa	Predicted RBP	4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	SMCR5	Q8TEV8	140 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST1H2BH	Q93079	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST1H2BN	Q99877	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	HIST1H2BM	Q99879	126 aa		4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.94	□□□□□ -1.62
PSMD4-206	ENST00000453615	SERF1A	O75920	110 aa		4.93	□□□□□ -1.62
PSMD4-206	ENST00000453615	SPINK1	P00995	79 aa		4.93	□□□□□ -1.62
PSMD4-206	ENST00000453615	DDT	P30046	118 aa		4.93	□□□□□ -1.62
PSMD4-206	ENST00000453615	COA6	Q5JTJ3	125 aa	Known RBP	4.93	□□□□□ -1.62
PSMD4-206	ENST00000453615	S100A7L2	Q5SY68	101 aa		4.93	□□□□□ -1.62
PSMD4-206	ENST00000453615		Q8NBF4	154 aa		4.93	□□□□□ -1.62
PSMD4-206	ENST00000453615	PPDPF	Q9H3Y8	114 aa		4.93	□□□□□ -1.62
PSMD4-206	ENST00000453615	LOC107984156	A0A0G2JMH3	177 aa		4.92	□□□□□ -1.62
PSMD4-206	ENST00000453615	IGKC	P01834	107 aa		4.92	□□□□□ -1.62
PSMD4-206	ENST00000453615	FABP4	P15090	132 aa		4.92	□□□□□ -1.62
PSMD4-206	ENST00000453615	TSPEAR-AS2	P59090	65 aa		4.92	□□□□□ -1.62
PSMD4-206	ENST00000453615	JOSD1	Q15040	202 aa	Predicted RBP	4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms