RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 PRR4Q16378 134 aa10.11□□□□□ -0.79
TNFRSF4-202ENST00000453580 MAP1LC3CQ9BXW4 147 aa10.11□□□□□ -0.79
TNFRSF4-202ENST00000453580 A0A087X002 238 aa10.09□□□□□ -0.79
TNFRSF4-202ENST00000453580 M0R378 163 aa10.09□□□□□ -0.79
TNFRSF4-202ENST00000453580 CTAG1AP78358 180 aa10.09□□□□□ -0.79
TNFRSF4-202ENST00000453580 MEIG1Q5JSS6 88 aa10.09□□□□□ -0.79
TNFRSF4-202ENST00000453580 IGKV2D-26A0A0A0MRZ7 120 aa10.08□□□□□ -0.8
TNFRSF4-202ENST00000453580 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
TNFRSF4-202ENST00000453580 SCO1O75880 301 aa10.08□□□□□ -0.8
TNFRSF4-202ENST00000453580 S100A12P80511 92 aa10.08□□□□□ -0.8
TNFRSF4-202ENST00000453580 LRP2P98164 4655 aa10.08□□□□□ -0.8
TNFRSF4-202ENST00000453580 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
TNFRSF4-202ENST00000453580 PRLHP81277 87 aa10.07□□□□□ -0.8
TNFRSF4-202ENST00000453580 CBLN2Q8IUK8 224 aa10.07□□□□□ -0.8
TNFRSF4-202ENST00000453580 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
TNFRSF4-202ENST00000453580 TSPAN13O95857 204 aa10.06□□□□□ -0.8
TNFRSF4-202ENST00000453580 TRGC2P03986 189 aa10.06□□□□□ -0.8
TNFRSF4-202ENST00000453580 PLNP26678 52 aa10.06□□□□□ -0.8
TNFRSF4-202ENST00000453580 FAM19A2Q8N3H0 131 aa10.06□□□□□ -0.8
TNFRSF4-202ENST00000453580 NDUFA12Q9UI09 145 aa10.06□□□□□ -0.8
TNFRSF4-202ENST00000453580 HSPB8Q9UJY1 196 aa10.06□□□□□ -0.8
TNFRSF4-202ENST00000453580 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
TNFRSF4-202ENST00000453580 SMIM13P0DJ93 91 aa10.05□□□□□ -0.8
TNFRSF4-202ENST00000453580 BOD1L2Q8IYS8 172 aa10.05□□□□□ -0.8
TNFRSF4-202ENST00000453580 HERVK_113P61574 105 aa10.04□□□□□ -0.8
TNFRSF4-202ENST00000453580 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
TNFRSF4-202ENST00000453580 ZNF706Q9Y5V0 76 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF4-202ENST00000453580 H0Y8G0 127 aa10.03□□□□□ -0.8
TNFRSF4-202ENST00000453580 PRYO14603 147 aa10.03□□□□□ -0.8
TNFRSF4-202ENST00000453580 MIR7-3HGQ8N6C7 128 aa10.03□□□□□ -0.8
TNFRSF4-202ENST00000453580 LINC00304Q8N9R0 145 aa10.03□□□□□ -0.8
TNFRSF4-202ENST00000453580 HIGD2AQ9BW72 106 aa10.02□□□□□ -0.81
TNFRSF4-202ENST00000453580 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.81
TNFRSF4-202ENST00000453580 LEPROTO15243 131 aa10.01□□□□□ -0.81
TNFRSF4-202ENST00000453580 SERF1AO75920 110 aa10.01□□□□□ -0.81
TNFRSF4-202ENST00000453580 NMUP48645 174 aa10.01□□□□□ -0.81
TNFRSF4-202ENST00000453580 KRTAP13-2Q52LG2 175 aa10□□□□□ -0.81
TNFRSF4-202ENST00000453580 Q8NDZ9 215 aa10□□□□□ -0.81
TNFRSF4-202ENST00000453580 DPM2O94777 84 aa9.99□□□□□ -0.81
TNFRSF4-202ENST00000453580 LINC00337Q8N6G1 96 aa9.99□□□□□ -0.81
TNFRSF4-202ENST00000453580 KCNQ1DNQ9H478 68 aa9.99□□□□□ -0.81
TNFRSF4-202ENST00000453580 SPAG11AQ6PDA7 123 aa9.98□□□□□ -0.81
TNFRSF4-202ENST00000453580 MIEN1Q9BRT3 115 aa9.98□□□□□ -0.81
TNFRSF4-202ENST00000453580 LOC107984156A0A0G2JMH3 177 aa9.97□□□□□ -0.81
TNFRSF4-202ENST00000453580 ETDCA0A1B0GVM5 59 aa9.97□□□□□ -0.81
TNFRSF4-202ENST00000453580 LGALS3P17931 250 aaKnown RBP9.97□□□□□ -0.81
TNFRSF4-202ENST00000453580 ARL17AQ8IVW1 177 aa9.97□□□□□ -0.81
TNFRSF4-202ENST00000453580 J3QQQ9 107 aa9.96□□□□□ -0.82
TNFRSF4-202ENST00000453580 NCR3O14931 201 aa9.96□□□□□ -0.82
TNFRSF4-202ENST00000453580 IGKCP01834 107 aa9.96□□□□□ -0.82
TNFRSF4-202ENST00000453580 FABP4P15090 132 aa9.96□□□□□ -0.82
TNFRSF4-202ENST00000453580 TRBV10-2A0A0K0K1G8 114 aa9.95□□□□□ -0.82
TNFRSF4-202ENST00000453580 SPRR1AP35321 89 aa9.95□□□□□ -0.82
TNFRSF4-202ENST00000453580 SPRR4Q96PI1 79 aa9.95□□□□□ -0.82
TNFRSF4-202ENST00000453580 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
TNFRSF4-202ENST00000453580 TRBV10-3A0A0K0K1G6 114 aa9.93□□□□□ -0.82
TNFRSF4-202ENST00000453580 COLCA2A8K830 154 aa9.93□□□□□ -0.82
TNFRSF4-202ENST00000453580 LINC00310P59036 64 aa9.93□□□□□ -0.82
TNFRSF4-202ENST00000453580 CBY1Q9Y3M2 126 aa9.93□□□□□ -0.82
TNFRSF4-202ENST00000453580 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
TNFRSF4-202ENST00000453580 SPANXB1Q9NS25 103 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF4-202ENST00000453580 NDUFC2O95298 119 aa9.91□□□□□ -0.82
TNFRSF4-202ENST00000453580 DDTP30046 118 aa9.91□□□□□ -0.82
TNFRSF4-202ENST00000453580 SLC7A5P1Q8MH63 180 aa9.91□□□□□ -0.82
TNFRSF4-202ENST00000453580 TSPEAR-AS2P59090 65 aa9.9□□□□□ -0.82
TNFRSF4-202ENST00000453580 S100A7L2Q5SY68 101 aa9.9□□□□□ -0.82
TNFRSF4-202ENST00000453580 SMCR5Q8TEV8 140 aa9.9□□□□□ -0.82
TNFRSF4-202ENST00000453580 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF4-202ENST00000453580 JOSD1Q15040 202 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF4-202ENST00000453580 C3orf22Q8N5N4 141 aa9.88□□□□□ -0.83
TNFRSF4-202ENST00000453580 DAND5Q8N907 189 aa9.88□□□□□ -0.83
TNFRSF4-202ENST00000453580 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
TNFRSF4-202ENST00000453580 E9PLD3 99 aa9.87□□□□□ -0.83
TNFRSF4-202ENST00000453580 TPRXLQ17RH7 258 aa9.87□□□□□ -0.83
TNFRSF4-202ENST00000453580 RNF213Q63HN8 5207 aa9.87□□□□□ -0.83
TNFRSF4-202ENST00000453580 IGLV7-46A0A075B6I9 117 aa9.86□□□□□ -0.83
TNFRSF4-202ENST00000453580 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
TNFRSF4-202ENST00000453580 LPAP08519 4548 aa9.86□□□□□ -0.83
TNFRSF4-202ENST00000453580 B5MCH6 92 aa9.85□□□□□ -0.83
TNFRSF4-202ENST00000453580 HINT1P49773 126 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF4-202ENST00000453580 CDIP1Q9H305 208 aa9.85□□□□□ -0.83
TNFRSF4-202ENST00000453580 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
TNFRSF4-202ENST00000453580 SPINK1P00995 79 aa9.84□□□□□ -0.83
TNFRSF4-202ENST00000453580 LINC00483Q53H64 154 aa9.84□□□□□ -0.83
TNFRSF4-202ENST00000453580 Q6ZRX8 168 aa9.84□□□□□ -0.83
TNFRSF4-202ENST00000453580 FP248Q71RG6 208 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF4-202ENST00000453580 A0A0J9YXY3 114 aa9.83□□□□□ -0.84
TNFRSF4-202ENST00000453580 IGLV6-57P01721 117 aa9.83□□□□□ -0.84
TNFRSF4-202ENST00000453580 TRAV23DV6A0A075B6W5 121 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST1H2BKO60814 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST1H2BJP06899 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST1H2BOP23527 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST1H2BBP33778 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST1H2BDP58876 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST1H2BCP62807 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST2H2BEQ16778 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 GAGE2AQ6NT46 116 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 PET117Q6UWS5 81 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 SSBP3-AS1Q7Z2R9 100 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 344 ms