RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 PKDREJQ9NTG1 2253 aa5.67□□□□□ -1.5
SMCO1-202ENST00000452776 DSPP15924 2871 aaKnown RBP5.66□□□□□ -1.5
SMCO1-202ENST00000452776 A0A0J9YWU9 116 aa5.66□□□□□ -1.5
SMCO1-202ENST00000452776 A6NN06 94 aa5.66□□□□□ -1.5
SMCO1-202ENST00000452776 SMIM29Q86T20 159 aa5.66□□□□□ -1.5
SMCO1-202ENST00000452776 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
SMCO1-202ENST00000452776 PTPRQQ9UMZ3 2332 aa5.65□□□□□ -1.5
SMCO1-202ENST00000452776 KALRNO60229 2985 aa5.65□□□□□ -1.5
SMCO1-202ENST00000452776 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.65□□□□□ -1.5
SMCO1-202ENST00000452776 LOC101927531A0A1B0GV80 90 aa5.65□□□□□ -1.5
SMCO1-202ENST00000452776 SPTSSBQ8NFR3 76 aa5.65□□□□□ -1.5
SMCO1-202ENST00000452776 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
SMCO1-202ENST00000452776 ASH1LQ9NR48 2969 aaKnown RBP5.65□□□□□ -1.5
SMCO1-202ENST00000452776 DMXL1Q9Y485 3027 aa5.65□□□□□ -1.51
SMCO1-202ENST00000452776 DOPEY2Q9Y3R5 2298 aa5.65□□□□□ -1.51
SMCO1-202ENST00000452776 GVQW2A0A096LPI5 108 aaPredicted RBP5.64□□□□□ -1.51
SMCO1-202ENST00000452776 BRD3OSQ6XYD6 125 aa5.64□□□□□ -1.51
SMCO1-202ENST00000452776 Q8N9L7 120 aa5.64□□□□□ -1.51
SMCO1-202ENST00000452776 LINC00208Q96KT6 92 aa5.64□□□□□ -1.51
SMCO1-202ENST00000452776 NOP10Q9NPE3 64 aaKnown RBP5.64□□□□□ -1.51
SMCO1-202ENST00000452776 FREM2Q5SZK8 3169 aa5.64□□□□□ -1.51
SMCO1-202ENST00000452776 TECTAO75443 2155 aa5.63□□□□□ -1.51
SMCO1-202ENST00000452776 C19orf84I3L1E1 186 aa5.63□□□□□ -1.51
SMCO1-202ENST00000452776 MYO15AQ9UKN7 3530 aa5.63□□□□□ -1.51
SMCO1-202ENST00000452776 GCN1Q92616 2671 aaKnown RBP5.63□□□□□ -1.51
SMCO1-202ENST00000452776 NAV2Q8IVL1 2488 aa5.63□□□□□ -1.51
SMCO1-202ENST00000452776 A6NED7 52 aa5.62□□□□□ -1.51
SMCO1-202ENST00000452776 C10orf25Q5T742 122 aa5.62□□□□□ -1.51
SMCO1-202ENST00000452776 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
SMCO1-202ENST00000452776 MED13LQ71F56 2210 aa5.62□□□□□ -1.51
SMCO1-202ENST00000452776 IGLV5-48A0A075B6I7 105 aa5.62□□□□□ -1.51
SMCO1-202ENST00000452776 KCNQ1DNQ9H478 68 aa5.62□□□□□ -1.51
SMCO1-202ENST00000452776 LINC00612Q8N6U2 182 aa5.6□□□□□ -1.51
SMCO1-202ENST00000452776 NKAPP1Q8N9T2 125 aa5.6□□□□□ -1.51
SMCO1-202ENST00000452776 CHCHD10Q8WYQ3 142 aaPredicted RBP5.6□□□□□ -1.51
SMCO1-202ENST00000452776 ZFYVE26Q68DK2 2539 aa5.6□□□□□ -1.51
SMCO1-202ENST00000452776 PRRC2CQ9Y520 2896 aaKnown RBP5.6□□□□□ -1.51
SMCO1-202ENST00000452776 A0A087X002 238 aa5.6□□□□□ -1.51
SMCO1-202ENST00000452776 DEFB124Q8NES8 71 aa5.6□□□□□ -1.51
SMCO1-202ENST00000452776 DMDP11532 3685 aa5.59□□□□□ -1.51
SMCO1-202ENST00000452776 C8orf87E5RJ46 101 aa5.59□□□□□ -1.51
SMCO1-202ENST00000452776 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
SMCO1-202ENST00000452776 KPRPQ5T749 579 aaPredicted RBP5.59□□□□□ -1.51
SMCO1-202ENST00000452776 KLK12Q9UKR0 248 aa5.59□□□□□ -1.51
SMCO1-202ENST00000452776 SPTBN2O15020 2390 aa5.59□□□□□ -1.51
SMCO1-202ENST00000452776 EP300Q09472 2414 aaPredicted RBP5.59□□□□□ -1.52
SMCO1-202ENST00000452776 FAM229AH3BQW9 127 aa5.58□□□□□ -1.52
SMCO1-202ENST00000452776 C9orf116Q5BN46 136 aaPredicted RBP5.58□□□□□ -1.52
SMCO1-202ENST00000452776 Q8NDZ9 215 aa5.58□□□□□ -1.52
SMCO1-202ENST00000452776 C11orf45Q8TAV5 145 aa5.58□□□□□ -1.52
SMCO1-202ENST00000452776 SPAG11BQ08648 103 aa5.58□□□□□ -1.52
SMCO1-202ENST00000452776 WFDC10AQ9H1F0 79 aa5.58□□□□□ -1.52
SMCO1-202ENST00000452776 C3orf84H3BNL1 204 aa5.57□□□□□ -1.52
SMCO1-202ENST00000452776 RP1L1Q8IWN7 2480 aaPredicted RBP5.56□□□□□ -1.52
SMCO1-202ENST00000452776 PRB1P04280 392 aa5.56□□□□□ -1.52
SMCO1-202ENST00000452776 SLURP1P55000 103 aa5.56□□□□□ -1.52
SMCO1-202ENST00000452776 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
SMCO1-202ENST00000452776 C4orf3Q8WVX3 66 aa5.56□□□□□ -1.52
SMCO1-202ENST00000452776 SPRR4Q96PI1 79 aa5.56□□□□□ -1.52
SMCO1-202ENST00000452776 CNOT1A5YKK6 2376 aaKnown RBP5.56□□□□□ -1.52
SMCO1-202ENST00000452776 CYSRT1A8MQ03 144 aa5.55□□□□□ -1.52
SMCO1-202ENST00000452776 MSMBP08118 114 aa5.55□□□□□ -1.52
SMCO1-202ENST00000452776 REG3AQ06141 175 aa5.55□□□□□ -1.52
SMCO1-202ENST00000452776 DHRS4-AS1Q9P1J3 65 aa5.55□□□□□ -1.52
SMCO1-202ENST00000452776 MGAQ8IWI9 3026 aa5.55□□□□□ -1.52
SMCO1-202ENST00000452776 ODF3L2Q3SX64 289 aa5.55□□□□□ -1.52
SMCO1-202ENST00000452776 Q8NBF4 154 aa5.55□□□□□ -1.52
SMCO1-202ENST00000452776 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
SMCO1-202ENST00000452776 SPTBN1Q01082 2364 aaKnown RBP5.54□□□□□ -1.52
SMCO1-202ENST00000452776 GYPEP15421 78 aa5.54□□□□□ -1.52
SMCO1-202ENST00000452776 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
SMCO1-202ENST00000452776 PRO0255Q9UI72 69 aa5.54□□□□□ -1.52
SMCO1-202ENST00000452776 PIEZO2Q9H5I5 2752 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 B4DSR2 109 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 DSCR10P59022 87 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 PRR4Q16378 134 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 C10orf99Q6UWK7 81 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 ST20-AS1Q8NBB2 130 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 ZFHX3Q15911 3703 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 CELSR3Q9NYQ7 3312 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 ANGP03950 147 aaKnown RBP5.53□□□□□ -1.52
SMCO1-202ENST00000452776 DSCR9P59020 149 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 MOBPQ13875 183 aa5.53□□□□□ -1.52
SMCO1-202ENST00000452776 PCNX1Q96RV3 2341 aa5.52□□□□□ -1.53
SMCO1-202ENST00000452776 A8MU10 97 aa5.52□□□□□ -1.53
SMCO1-202ENST00000452776 C1orf137Q5JT78 98 aa5.52□□□□□ -1.53
SMCO1-202ENST00000452776 CASC2Q6XLA1 102 aa5.52□□□□□ -1.53
SMCO1-202ENST00000452776 X6R8D5 127 aa5.52□□□□□ -1.53
SMCO1-202ENST00000452776 HELZ2Q9BYK8 2649 aaKnown RBP5.52□□□□□ -1.53
SMCO1-202ENST00000452776 IGLV7-46A0A075B6I9 117 aa5.51□□□□□ -1.53
SMCO1-202ENST00000452776 EGFEM1PQ0D2K5 195 aa5.51□□□□□ -1.53
SMCO1-202ENST00000452776 DEFB112Q30KQ8 113 aa5.51□□□□□ -1.53
SMCO1-202ENST00000452776 Q8N377 158 aa5.51□□□□□ -1.53
SMCO1-202ENST00000452776 ZNF702PQ9H963 129 aa5.51□□□□□ -1.53
SMCO1-202ENST00000452776 USP9XQ93008 2570 aaPredicted RBP5.51□□□□□ -1.53
SMCO1-202ENST00000452776 TACC2O95359 2948 aa5.51□□□□□ -1.53
SMCO1-202ENST00000452776 ASPMQ8IZT6 3477 aa5.5□□□□□ -1.53
SMCO1-202ENST00000452776 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
SMCO1-202ENST00000452776 K7EQZ3 153 aa5.5□□□□□ -1.53
SMCO1-202ENST00000452776 CLPSL2Q6UWE3 100 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms