RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ABCA4P78363 2273 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 IGLV4-3A0A075B6K6 122 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
EPHA3-202ENST00000452448 SLPIP03973 132 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 C20orf166-AS1Q96NR2 134 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 WFDC10AQ9H1F0 79 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 DPM3Q9P2X0 92 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 CR1P17927 2039 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 K7EIM0 57 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 MSMBP08118 114 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 DEFB113Q30KQ7 82 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 CAMK2N2Q96S95 79 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 PLAC8Q9NZF1 115 aa3.24□□□□□ -1.89
EPHA3-202ENST00000452448 IGHV3-49A0A0A0MS15 119 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 NDUFA4O00483 81 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 IGHV3-53P01767 116 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 PDE6GP18545 87 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 LYPD2Q6UXB3 125 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 LINC00167Q96N53 147 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 ACACAQ13085 2346 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 USP34Q70CQ2 3546 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 LINC00483Q53H64 154 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 NPBQ8NG41 125 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 COX7B2Q8TF08 81 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 LENEPQ9Y5L5 61 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 APC2O95996 2303 aa3.23□□□□□ -1.89
EPHA3-202ENST00000452448 WDR87Q6ZQQ6 2873 aa3.22□□□□□ -1.89
EPHA3-202ENST00000452448 XIRP2A4UGR9 3374 aa3.22□□□□□ -1.89
EPHA3-202ENST00000452448 CREBBPQ92793 2442 aa3.22□□□□□ -1.89
EPHA3-202ENST00000452448 LOC110117498A0A087WWA1 95 aa3.22□□□□□ -1.89
EPHA3-202ENST00000452448 RPL39P62891 51 aaKnown RBP3.22□□□□□ -1.89
EPHA3-202ENST00000452448 TEP1Q99973 2627 aaKnown RBP3.22□□□□□ -1.89
EPHA3-202ENST00000452448 UBR5O95071 2799 aaPredicted RBP3.22□□□□□ -1.89
EPHA3-202ENST00000452448 ITPR1Q14643 2758 aa3.22□□□□□ -1.89
EPHA3-202ENST00000452448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.22□□□□□ -1.89
EPHA3-202ENST00000452448 RPL39LQ96EH5 51 aaKnown RBP3.22□□□□□ -1.89
EPHA3-202ENST00000452448 ZFHX4Q86UP3 3567 aa3.22□□□□□ -1.89
EPHA3-202ENST00000452448 DCHS1Q96JQ0 3298 aa3.22□□□□□ -1.89
EPHA3-202ENST00000452448 TENM4Q6N022 2769 aa3.22□□□□□ -1.89
EPHA3-202ENST00000452448 IGLV4-60A0A075B6I1 120 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 IGLV11-55A0A075B6I3 123 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 IGKV4-1P06312 121 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 CNBPP62633 177 aaKnown RBP3.21□□□□□ -1.9
EPHA3-202ENST00000452448 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 MUC7Q8TAX7 377 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 SMIM11BQ8TCY0 68 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 SORL1Q92673 2214 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 PTPRQQ9UMZ3 2332 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.21□□□□□ -1.9
EPHA3-202ENST00000452448 APELAP0DMC3 54 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 RNASE3P12724 160 aaKnown RBP3.21□□□□□ -1.9
EPHA3-202ENST00000452448 SMIM29Q86T20 159 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 SPANXA2-OT1Q8N9U9 137 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 LINC01006Q8NI28 216 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 MALRD1Q5VYJ5 2156 aa3.21□□□□□ -1.9
EPHA3-202ENST00000452448 IGHV7-4-1A0A0J9YVY3 117 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 NDUFA1O15239 70 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 DEFB112Q30KQ8 113 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 CIRBP-AS1Q8TBR5 109 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 SPTAN1Q13813 2472 aaKnown RBP3.2□□□□□ -1.9
EPHA3-202ENST00000452448 IGLV8-61A0A075B6I0 122 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 IGKV2-40A0A087WW87 121 aaPredicted RBP3.2□□□□□ -1.9
EPHA3-202ENST00000452448 H0Y9P7 68 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 M0R2N4 97 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 IGKV2D-40P01614 121 aaPredicted RBP3.2□□□□□ -1.9
EPHA3-202ENST00000452448 IGKV3-20P01619 116 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 DNAH10OSP0CZ25 163 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 KLK9Q2XQG4 91 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 MINOS1Q5TGZ0 78 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 MINOS1-NBL1R4GNA1 71 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 CNTRLQ7Z7A1 2325 aa3.2□□□□□ -1.9
EPHA3-202ENST00000452448 ODF3BA8MYP8 253 aa3.19□□□□□ -1.9
EPHA3-202ENST00000452448 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
EPHA3-202ENST00000452448 COA5Q86WW8 74 aa3.19□□□□□ -1.9
EPHA3-202ENST00000452448 CASC10Q5T4H9 136 aa3.19□□□□□ -1.9
EPHA3-202ENST00000452448 Q8N1X5 172 aa3.19□□□□□ -1.9
EPHA3-202ENST00000452448 Q8N9L7 120 aa3.19□□□□□ -1.9
EPHA3-202ENST00000452448 C7orf33Q8WU49 177 aa3.19□□□□□ -1.9
EPHA3-202ENST00000452448 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
EPHA3-202ENST00000452448 KRTAP9-4Q9BYQ2 154 aa3.19□□□□□ -1.9
EPHA3-202ENST00000452448 PCNX1Q96RV3 2341 aa3.18□□□□□ -1.9
EPHA3-202ENST00000452448 AHCTF1Q8WYP5 2266 aa3.18□□□□□ -1.9
EPHA3-202ENST00000452448 ABCA12Q86UK0 2595 aa3.18□□□□□ -1.9
EPHA3-202ENST00000452448 DMXL1Q9Y485 3027 aa3.18□□□□□ -1.9
EPHA3-202ENST00000452448 KPRPQ5T749 579 aaPredicted RBP3.18□□□□□ -1.9
EPHA3-202ENST00000452448 DOPEY2Q9Y3R5 2298 aa3.18□□□□□ -1.9
EPHA3-202ENST00000452448 TRGV2A0A075B6R0 118 aa3.18□□□□□ -1.9
EPHA3-202ENST00000452448 ETDCA0A1B0GVM5 59 aa3.18□□□□□ -1.9
EPHA3-202ENST00000452448 NTM-AS1Q6ZSK4 140 aa3.18□□□□□ -1.9
EPHA3-202ENST00000452448 Q8NBF4 154 aa3.18□□□□□ -1.9
EPHA3-202ENST00000452448 PLCE1Q9P212 2302 aa3.17□□□□□ -1.9
EPHA3-202ENST00000452448 MED13LQ71F56 2210 aa3.17□□□□□ -1.9
EPHA3-202ENST00000452448 LINC00959A0A1B0GUT2 108 aa3.17□□□□□ -1.9
EPHA3-202ENST00000452448 LINC00612Q8N6U2 182 aa3.17□□□□□ -1.9
EPHA3-202ENST00000452448 PRR34Q9NV39 138 aa3.17□□□□□ -1.9
EPHA3-202ENST00000452448 FBN2P35556 2912 aa3.17□□□□□ -1.9
EPHA3-202ENST00000452448 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms