RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 H0Y8G0 127 aa10.75□□□□□ -0.69
CTNS-204ENST00000452111 RPL28P46779 137 aaKnown RBP10.75□□□□□ -0.69
CTNS-204ENST00000452111 IGKV2-28A0A075B6P5 120 aa10.74□□□□□ -0.69
CTNS-204ENST00000452111 SERF1AO75920 110 aa10.74□□□□□ -0.69
CTNS-204ENST00000452111 IGKV2D-28P01615 120 aa10.74□□□□□ -0.69
CTNS-204ENST00000452111 VPREB1P12018 145 aa10.73□□□□□ -0.69
CTNS-204ENST00000452111 AKR1D1P51857 326 aa10.73□□□□□ -0.69
CTNS-204ENST00000452111 LINC00158P58513 81 aa10.73□□□□□ -0.69
CTNS-204ENST00000452111 LINC00310P59036 64 aa10.73□□□□□ -0.69
CTNS-204ENST00000452111 A0A0U1RRA0 63 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST1H2BKO60814 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST1H2BJP06899 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST1H2BOP23527 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST1H2BBP33778 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST1H2BDP58876 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST1H2BCP62807 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 RPL24P83731 157 aaKnown RBP10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST2H2BEQ16778 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST1H2BHQ93079 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST1H2BNQ99877 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 HIST1H2BMQ99879 126 aa10.72□□□□□ -0.69
CTNS-204ENST00000452111 LEPROTL1O95214 131 aa10.71□□□□□ -0.69
CTNS-204ENST00000452111 UBE2AP49459 152 aa10.71□□□□□ -0.69
CTNS-204ENST00000452111 Q8NDZ9 215 aa10.71□□□□□ -0.69
CTNS-204ENST00000452111 RPL13AP40429 203 aaKnown RBP10.7□□□□□ -0.7
CTNS-204ENST00000452111 LINC00518Q8N0U6 118 aa10.69□□□□□ -0.7
CTNS-204ENST00000452111 MEIG1Q5JSS6 88 aa10.68□□□□□ -0.7
CTNS-204ENST00000452111 TMEM238C9JI98 176 aa10.67□□□□□ -0.7
CTNS-204ENST00000452111 SMIM13P0DJ93 91 aa10.67□□□□□ -0.7
CTNS-204ENST00000452111 FABP4P15090 132 aa10.67□□□□□ -0.7
CTNS-204ENST00000452111 KRTAP13-1Q8IUC0 172 aa10.67□□□□□ -0.7
CTNS-204ENST00000452111 HSPB8Q9UJY1 196 aa10.67□□□□□ -0.7
CTNS-204ENST00000452111 PRLHP81277 87 aa10.66□□□□□ -0.7
CTNS-204ENST00000452111 COA6Q5JTJ3 125 aaKnown RBP10.66□□□□□ -0.7
CTNS-204ENST00000452111 TMEM126AQ9H061 195 aa10.66□□□□□ -0.7
CTNS-204ENST00000452111 SMIM6P0DI80 62 aa10.65□□□□□ -0.7
CTNS-204ENST00000452111 FAM19A1Q7Z5A9 133 aa10.65□□□□□ -0.7
CTNS-204ENST00000452111 NDUFA12Q9UI09 145 aa10.65□□□□□ -0.7
CTNS-204ENST00000452111 LPAP08519 4548 aa10.64□□□□□ -0.71
CTNS-204ENST00000452111 A0A087X002 238 aa10.64□□□□□ -0.71
CTNS-204ENST00000452111 S100A2P29034 98 aa10.64□□□□□ -0.71
CTNS-204ENST00000452111 HERV-K104P63124 156 aa10.64□□□□□ -0.71
CTNS-204ENST00000452111 PMCHL2Q9BQD1 86 aa10.64□□□□□ -0.71
CTNS-204ENST00000452111 ANAPC11Q9NYG5 84 aa10.64□□□□□ -0.71
CTNS-204ENST00000452111 M0R378 163 aa10.63□□□□□ -0.71
CTNS-204ENST00000452111 PLNP26678 52 aa10.63□□□□□ -0.71
CTNS-204ENST00000452111 TSPEAR-AS2P59090 65 aa10.63□□□□□ -0.71
CTNS-204ENST00000452111 HIST3H2BBQ8N257 126 aa10.63□□□□□ -0.71
CTNS-204ENST00000452111 MIR7-3HGQ8N6C7 128 aa10.63□□□□□ -0.71
CTNS-204ENST00000452111 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
CTNS-204ENST00000452111 CRYGAP11844 174 aa10.62□□□□□ -0.71
CTNS-204ENST00000452111 DPM2O94777 84 aa10.61□□□□□ -0.71
CTNS-204ENST00000452111 BOD1L2Q8IYS8 172 aa10.61□□□□□ -0.71
CTNS-204ENST00000452111 C12orf57Q99622 126 aa10.61□□□□□ -0.71
CTNS-204ENST00000452111 LEPROTO15243 131 aa10.6□□□□□ -0.71
CTNS-204ENST00000452111 PLEKHB2Q96CS7 222 aa10.6□□□□□ -0.71
CTNS-204ENST00000452111 LINC00587B1AMM8 73 aa10.59□□□□□ -0.71
CTNS-204ENST00000452111 NCR3O14931 201 aa10.59□□□□□ -0.71
CTNS-204ENST00000452111 IGKCP01834 107 aa10.59□□□□□ -0.71
CTNS-204ENST00000452111 HERVK_113P61574 105 aa10.59□□□□□ -0.71
CTNS-204ENST00000452111 TYMSOSQ8TAI1 123 aa10.59□□□□□ -0.71
CTNS-204ENST00000452111 MAP1LC3CQ9BXW4 147 aa10.58□□□□□ -0.72
CTNS-204ENST00000452111 J3QQQ9 107 aa10.57□□□□□ -0.72
CTNS-204ENST00000452111 TSPAN13O95857 204 aa10.57□□□□□ -0.72
CTNS-204ENST00000452111 DAND5Q8N907 189 aa10.57□□□□□ -0.72
CTNS-204ENST00000452111 RNF213Q63HN8 5207 aa10.56□□□□□ -0.72
CTNS-204ENST00000452111 LGALS3P17931 250 aaKnown RBP10.55□□□□□ -0.72
CTNS-204ENST00000452111 KRTAP13-2Q52LG2 175 aa10.55□□□□□ -0.72
CTNS-204ENST00000452111 HIST1H2BLQ99880 126 aa10.55□□□□□ -0.72
CTNS-204ENST00000452111 HIGD2AQ9BW72 106 aa10.55□□□□□ -0.72
CTNS-204ENST00000452111 PRR4Q16378 134 aa10.54□□□□□ -0.72
CTNS-204ENST00000452111 FAM229BQ4G0N7 80 aa10.54□□□□□ -0.72
CTNS-204ENST00000452111 IGKV2D-26A0A0A0MRZ7 120 aa10.53□□□□□ -0.72
CTNS-204ENST00000452111 NMUP48645 174 aa10.53□□□□□ -0.72
CTNS-204ENST00000452111 S100A12P80511 92 aa10.53□□□□□ -0.72
CTNS-204ENST00000452111 PRYO14603 147 aa10.52□□□□□ -0.73
CTNS-204ENST00000452111 TRBV10-3A0A0K0K1G6 114 aa10.51□□□□□ -0.73
CTNS-204ENST00000452111 SYS1-DBNDD2H3BUS1 97 aa10.5□□□□□ -0.73
CTNS-204ENST00000452111 PYY3Q5JQD4 70 aa10.5□□□□□ -0.73
CTNS-204ENST00000452111 KCNQ1DNQ9H478 68 aa10.5□□□□□ -0.73
CTNS-204ENST00000452111 MIEN1Q9BRT3 115 aa10.49□□□□□ -0.73
CTNS-204ENST00000452111 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
CTNS-204ENST00000452111 E9PLD3 99 aa10.48□□□□□ -0.73
CTNS-204ENST00000452111 SPRR1AP35321 89 aa10.48□□□□□ -0.73
CTNS-204ENST00000452111 JOSD1Q15040 202 aaPredicted RBP10.48□□□□□ -0.73
CTNS-204ENST00000452111 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
CTNS-204ENST00000452111 LINC00337Q8N6G1 96 aa10.48□□□□□ -0.73
CTNS-204ENST00000452111 ETDCA0A1B0GVM5 59 aa10.47□□□□□ -0.73
CTNS-204ENST00000452111 LINC00304Q8N9R0 145 aa10.47□□□□□ -0.73
CTNS-204ENST00000452111 A0A0J9YXY3 114 aa10.46□□□□□ -0.73
CTNS-204ENST00000452111 NPC2P61916 151 aa10.46□□□□□ -0.73
CTNS-204ENST00000452111 SPRR4Q96PI1 79 aa10.46□□□□□ -0.73
CTNS-204ENST00000452111 TRBV10-2A0A0K0K1G8 114 aa10.45□□□□□ -0.74
CTNS-204ENST00000452111 PCP4L1A6NKN8 68 aa10.45□□□□□ -0.74
CTNS-204ENST00000452111 DDTP30046 118 aa10.45□□□□□ -0.74
CTNS-204ENST00000452111 C3orf22Q8N5N4 141 aa10.45□□□□□ -0.74
CTNS-204ENST00000452111 SPANXB1Q9NS25 103 aaPredicted RBP10.45□□□□□ -0.74
CTNS-204ENST00000452111 KRTAP4-16G5E9R7 235 aaPredicted RBP10.44□□□□□ -0.74
CTNS-204ENST00000452111 LINC01545Q5VT33 79 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms