RNA–Protein interactions for RNA: ENST00000452029.1

TMEM87B-202, Transcript of transmembrane protein 87B, humanhuman

TSL 1 (best)

Gene TMEM87B, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-202ENST00000452029 C2CD3Q4AC94 2353 aa1.01□□□□□ -2.25
TMEM87B-202ENST00000452029 IQGAP3Q86VI3 1631 aa1□□□□□ -2.25
TMEM87B-202ENST00000452029 PLCE1Q9P212 2302 aa1□□□□□ -2.25
TMEM87B-202ENST00000452029 ZNF469Q96JG9 3925 aaPredicted RBP1□□□□□ -2.25
TMEM87B-202ENST00000452029 COX7BP24311 80 aa1□□□□□ -2.25
TMEM87B-202ENST00000452029 Q5VSD8 79 aa1□□□□□ -2.25
TMEM87B-202ENST00000452029 USMG5Q96IX5 58 aa1□□□□□ -2.25
TMEM87B-202ENST00000452029 QSER1Q2KHR3 1735 aa1□□□□□ -2.25
TMEM87B-202ENST00000452029 DNMBPQ6XZF7 1577 aa1□□□□□ -2.25
TMEM87B-202ENST00000452029 MAGI3Q5TCQ9 1506 aa0.99□□□□□ -2.25
TMEM87B-202ENST00000452029 BDP1A6H8Y1 2624 aa0.99□□□□□ -2.25
TMEM87B-202ENST00000452029 PRH1P02810 166 aa0.99□□□□□ -2.25
TMEM87B-202ENST00000452029 SMIM13P0DJ93 91 aa0.99□□□□□ -2.25
TMEM87B-202ENST00000452029 COX6B1P14854 86 aa0.99□□□□□ -2.25
TMEM87B-202ENST00000452029 UGGT2Q9NYU1 1516 aa0.99□□□□□ -2.25
TMEM87B-202ENST00000452029 POLR1AO95602 1720 aaPredicted RBP0.98□□□□□ -2.25
TMEM87B-202ENST00000452029 SPTBN2O15020 2390 aa0.98□□□□□ -2.25
TMEM87B-202ENST00000452029 NDUFB1O75438 58 aa0.98□□□□□ -2.25
TMEM87B-202ENST00000452029 CD163L1Q9NR16 1453 aa0.98□□□□□ -2.25
TMEM87B-202ENST00000452029 MYO5CQ9NQX4 1742 aa0.98□□□□□ -2.25
TMEM87B-202ENST00000452029 SPTY2D1-AS1A0A0U1RR47 76 aa0.97□□□□□ -2.25
TMEM87B-202ENST00000452029 IFI6P09912 130 aa0.97□□□□□ -2.25
TMEM87B-202ENST00000452029 WFDC9Q8NEX5 89 aa0.97□□□□□ -2.25
TMEM87B-202ENST00000452029 USF3Q68DE3 2245 aa0.97□□□□□ -2.25
TMEM87B-202ENST00000452029 ABCA12Q86UK0 2595 aa0.97□□□□□ -2.25
TMEM87B-202ENST00000452029 URB1O60287 2271 aaKnown RBP0.96□□□□□ -2.26
TMEM87B-202ENST00000452029 FMN2Q9NZ56 1722 aa0.96□□□□□ -2.26
TMEM87B-202ENST00000452029 PDCD5O14737 125 aa0.96□□□□□ -2.26
TMEM87B-202ENST00000452029 IFI27P40305 119 aaPredicted RBP0.96□□□□□ -2.26
TMEM87B-202ENST00000452029 SPINK6Q6UWN8 80 aa0.96□□□□□ -2.26
TMEM87B-202ENST00000452029 NOTCH1P46531 2555 aa0.96□□□□□ -2.26
TMEM87B-202ENST00000452029 F8P00451 2351 aa0.95□□□□□ -2.26
TMEM87B-202ENST00000452029 SPRR1AP35321 89 aa0.95□□□□□ -2.26
TMEM87B-202ENST00000452029 DEFA5Q01523 94 aa0.95□□□□□ -2.26
TMEM87B-202ENST00000452029 SCN11AQ9UI33 1791 aa0.95□□□□□ -2.26
TMEM87B-202ENST00000452029 A0A087WXM4 84 aa0.94□□□□□ -2.26
TMEM87B-202ENST00000452029 SPRR1BP22528 89 aa0.94□□□□□ -2.26
TMEM87B-202ENST00000452029 DOT1LQ8TEK3 1739 aa0.94□□□□□ -2.26
TMEM87B-202ENST00000452029 CACNA1EQ15878 2313 aa0.94□□□□□ -2.26
TMEM87B-202ENST00000452029 DOPEY2Q9Y3R5 2298 aa0.94□□□□□ -2.26
TMEM87B-202ENST00000452029 PIEZO2Q9H5I5 2752 aa0.93□□□□□ -2.26
TMEM87B-202ENST00000452029 UBR3Q6ZT12 1888 aa0.93□□□□□ -2.26
TMEM87B-202ENST00000452029 CPSF4LA6NMK7 179 aaKnown RBP0.93□□□□□ -2.26
TMEM87B-202ENST00000452029 UMAD1C9J7I0 102 aa0.93□□□□□ -2.26
TMEM87B-202ENST00000452029 I3L3M4 83 aa0.93□□□□□ -2.26
TMEM87B-202ENST00000452029 COX8AP10176 69 aa0.93□□□□□ -2.26
TMEM87B-202ENST00000452029 HMGA1P17096 107 aaKnown RBP0.93□□□□□ -2.26
TMEM87B-202ENST00000452029 SMR3AQ99954 134 aa0.93□□□□□ -2.26
TMEM87B-202ENST00000452029 PIEZO1Q92508 2521 aa0.93□□□□□ -2.26
TMEM87B-202ENST00000452029 ANK2Q01484 3957 aa0.92□□□□□ -2.26
TMEM87B-202ENST00000452029 LCE6AA0A183 80 aa0.92□□□□□ -2.26
TMEM87B-202ENST00000452029 ARFGEF2Q9Y6D5 1785 aa0.92□□□□□ -2.26
TMEM87B-202ENST00000452029 CELSR2Q9HCU4 2923 aa0.92□□□□□ -2.26
TMEM87B-202ENST00000452029 MRPL34Q9BQ48 92 aaKnown RBP0.91□□□□□ -2.26
TMEM87B-202ENST00000452029 APCP25054 2843 aa0.91□□□□□ -2.26
TMEM87B-202ENST00000452029 ADAMTS12P58397 1594 aa0.91□□□□□ -2.26
TMEM87B-202ENST00000452029 COL14A1Q05707 1796 aaKnown RBP0.91□□□□□ -2.26
TMEM87B-202ENST00000452029 PTPRZ1P23471 2315 aaPredicted RBP0.9□□□□□ -2.26
TMEM87B-202ENST00000452029 Q5BKY6 102 aa0.9□□□□□ -2.27
TMEM87B-202ENST00000452029 DUOX2Q9NRD8 1548 aa0.89□□□□□ -2.27
TMEM87B-202ENST00000452029 TPRP12270 2363 aaKnown RBP0.89□□□□□ -2.27
TMEM87B-202ENST00000452029 NREPQ16612 68 aa0.89□□□□□ -2.27
TMEM87B-202ENST00000452029 ZNF292O60281 2723 aa0.88□□□□□ -2.27
TMEM87B-202ENST00000452029 PREX1Q8TCU6 1659 aa0.88□□□□□ -2.27
TMEM87B-202ENST00000452029 TSC2P49815 1807 aa0.88□□□□□ -2.27
TMEM87B-202ENST00000452029 HEPN1Q6WQI6 88 aa0.88□□□□□ -2.27
TMEM87B-202ENST00000452029 TNCP24821 2201 aa0.88□□□□□ -2.27
TMEM87B-202ENST00000452029 CFAP43Q8NDM7 1665 aa0.88□□□□□ -2.27
TMEM87B-202ENST00000452029 CHD9Q3L8U1 2897 aa0.87□□□□□ -2.27
TMEM87B-202ENST00000452029 PTPRQQ9UMZ3 2332 aa0.87□□□□□ -2.27
TMEM87B-202ENST00000452029 RPL38P63173 70 aaKnown RBP0.87□□□□□ -2.27
TMEM87B-202ENST00000452029 CLIP1P30622 1438 aa0.87□□□□□ -2.27
TMEM87B-202ENST00000452029 ZC3H13Q5T200 1668 aaKnown RBP0.86□□□□□ -2.27
TMEM87B-202ENST00000452029 DEFB105AQ8NG35 78 aa0.86□□□□□ -2.27
TMEM87B-202ENST00000452029 TIAM2Q8IVF5 1701 aa0.86□□□□□ -2.27
TMEM87B-202ENST00000452029 BCORQ6W2J9 1755 aa0.85□□□□□ -2.27
TMEM87B-202ENST00000452029 ANKRD50Q9ULJ7 1429 aa0.85□□□□□ -2.27
TMEM87B-202ENST00000452029 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.84□□□□□ -2.278e-8■■■■□ 26.3
TMEM87B-202ENST00000452029 NWD1Q149M9 1564 aa0.84□□□□□ -2.27
TMEM87B-202ENST00000452029 APLNQ9ULZ1 77 aa0.84□□□□□ -2.27
TMEM87B-202ENST00000452029 EIF2AK4Q9P2K8 1649 aaKnown RBP0.84□□□□□ -2.28
TMEM87B-202ENST00000452029 SPTBN1Q01082 2364 aaKnown RBP0.83□□□□□ -2.28
TMEM87B-202ENST00000452029 CSMD3Q7Z407 3707 aa0.83□□□□□ -2.28
TMEM87B-202ENST00000452029 CCL22O00626 93 aa0.83□□□□□ -2.28
TMEM87B-202ENST00000452029 DEFB109BQ30KR1 87 aa0.83□□□□□ -2.28
TMEM87B-202ENST00000452029 CDC42BPGQ6DT37 1551 aa0.83□□□□□ -2.28
TMEM87B-202ENST00000452029 ITSN1Q15811 1721 aa0.82□□□□□ -2.28
TMEM87B-202ENST00000452029 KLK9Q2XQG4 91 aa0.82□□□□□ -2.28
TMEM87B-202ENST00000452029 H1FX-AS1Q4G0G2 97 aa0.82□□□□□ -2.28
TMEM87B-202ENST00000452029 LELP1Q5T871 98 aa0.82□□□□□ -2.28
TMEM87B-202ENST00000452029 ASXL1Q8IXJ9 1541 aa0.82□□□□□ -2.28
TMEM87B-202ENST00000452029 LMTK2Q8IWU2 1503 aa0.81□□□□□ -2.28
TMEM87B-202ENST00000452029 H3BVH4 76 aa0.81□□□□□ -2.28
TMEM87B-202ENST00000452029 HILPDAQ9Y5L2 63 aa0.81□□□□□ -2.28
TMEM87B-202ENST00000452029 MADDQ8WXG6 1647 aa0.81□□□□□ -2.28
TMEM87B-202ENST00000452029 RICTORQ6R327 1708 aa0.81□□□□□ -2.28
TMEM87B-202ENST00000452029 PARP4Q9UKK3 1724 aaKnown RBP0.81□□□□□ -2.28
TMEM87B-202ENST00000452029 NDUFA4O00483 81 aa0.8□□□□□ -2.28
TMEM87B-202ENST00000452029 GVINP1Q7Z2Y8 2422 aa0.79□□□□□ -2.28
TMEM87B-202ENST00000452029 DIP2AQ14689 1571 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms