RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 TMEM258P61165 79 aa6.21□□□□□ -1.42
LINC01238-204ENST00000451070 C9orf153Q5TBE3 101 aa6.21□□□□□ -1.42
LINC01238-204ENST00000451070 PLEKHB2Q96CS7 222 aa6.21□□□□□ -1.42
LINC01238-204ENST00000451070 V9GYV3 84 aa6.21□□□□□ -1.42
LINC01238-204ENST00000451070 LRP2P98164 4655 aa6.2□□□□□ -1.42
LINC01238-204ENST00000451070 A0A096LNI7 61 aa6.2□□□□□ -1.42
LINC01238-204ENST00000451070 TRBV7-7A0A0K0K1E9 115 aa6.2□□□□□ -1.42
LINC01238-204ENST00000451070 SMIM27A0A1W2PRY6 76 aa6.2□□□□□ -1.42
LINC01238-204ENST00000451070 CRYGAP11844 174 aa6.2□□□□□ -1.42
LINC01238-204ENST00000451070 ATP5L2Q7Z4Y8 100 aa6.2□□□□□ -1.42
LINC01238-204ENST00000451070 C7orf33Q8WU49 177 aa6.2□□□□□ -1.42
LINC01238-204ENST00000451070 CARD19Q96LW7 228 aa6.2□□□□□ -1.42
LINC01238-204ENST00000451070 TRBV6-5A0A0K0K1A5 114 aa6.19□□□□□ -1.42
LINC01238-204ENST00000451070 I3L3M4 83 aa6.19□□□□□ -1.42
LINC01238-204ENST00000451070 TSHBP01222 138 aa6.19□□□□□ -1.42
LINC01238-204ENST00000451070 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
LINC01238-204ENST00000451070 Q5XG85 94 aa6.19□□□□□ -1.42
LINC01238-204ENST00000451070 FAM231DQ6ZW35 169 aa6.19□□□□□ -1.42
LINC01238-204ENST00000451070 LINC00959A0A1B0GUT2 108 aa6.18□□□□□ -1.42
LINC01238-204ENST00000451070 A8MWL6 223 aa6.18□□□□□ -1.42
LINC01238-204ENST00000451070 XCL1P47992 114 aa6.18□□□□□ -1.42
LINC01238-204ENST00000451070 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
LINC01238-204ENST00000451070 CEND1Q8N111 149 aa6.18□□□□□ -1.42
LINC01238-204ENST00000451070 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
LINC01238-204ENST00000451070 C4orf26Q17RF5 130 aa6.17□□□□□ -1.42
LINC01238-204ENST00000451070 CT83Q5H943 113 aa6.17□□□□□ -1.42
LINC01238-204ENST00000451070 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
LINC01238-204ENST00000451070 IGHV1-58A0A0C4DH39 117 aa6.16□□□□□ -1.42
LINC01238-204ENST00000451070 FAM240AA0A1B0GVK7 77 aa6.16□□□□□ -1.42
LINC01238-204ENST00000451070 DPM2O94777 84 aa6.16□□□□□ -1.42
LINC01238-204ENST00000451070 SCGB1C2P0DMR2 95 aa6.16□□□□□ -1.42
LINC01238-204ENST00000451070 CDC42SE2Q9NRR3 84 aa6.16□□□□□ -1.42
LINC01238-204ENST00000451070 TRBV27A0A0K0K1C4 114 aa6.15□□□□□ -1.42
LINC01238-204ENST00000451070 A0A1B0GUT8 65 aa6.15□□□□□ -1.42
LINC01238-204ENST00000451070 HIGD1CA8MV81 97 aa6.15□□□□□ -1.42
LINC01238-204ENST00000451070 FXYD2P54710 66 aa6.15□□□□□ -1.42
LINC01238-204ENST00000451070 CD164L2Q6UWJ8 174 aa6.15□□□□□ -1.42
LINC01238-204ENST00000451070 HRCT1Q6UXD1 115 aa6.15□□□□□ -1.42
LINC01238-204ENST00000451070 LINC00474Q9P2X8 69 aa6.15□□□□□ -1.42
LINC01238-204ENST00000451070 TP73-AS1Q9UF72 201 aa6.15□□□□□ -1.42
LINC01238-204ENST00000451070 NDUFC2-KCTD14E9PQ53 114 aa6.14□□□□□ -1.43
LINC01238-204ENST00000451070 COX7CP15954 63 aa6.14□□□□□ -1.43
LINC01238-204ENST00000451070 SS18Q15532 418 aa6.14□□□□□ -1.43
LINC01238-204ENST00000451070 AMN1Q8IY45 258 aa6.14□□□□□ -1.43
LINC01238-204ENST00000451070 ANKRD29Q8N6D5 301 aa6.14□□□□□ -1.43
LINC01238-204ENST00000451070 URB1-AS1Q96HZ7 61 aa6.14□□□□□ -1.43
LINC01238-204ENST00000451070 A0A0J9YXV3 536 aa6.13□□□□□ -1.43
LINC01238-204ENST00000451070 SMKR1H3BMG3 65 aa6.13□□□□□ -1.43
LINC01238-204ENST00000451070 TRACP01848 142 aa6.13□□□□□ -1.43
LINC01238-204ENST00000451070 RPL13AP40429 203 aaKnown RBP6.13□□□□□ -1.43
LINC01238-204ENST00000451070 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
LINC01238-204ENST00000451070 SYCNQ0VAF6 134 aa6.13□□□□□ -1.43
LINC01238-204ENST00000451070 SRSF9Q13242 221 aaKnown RBP eCLIP6.13□□□□□ -1.43
LINC01238-204ENST00000451070 NHP2Q9NX24 153 aaKnown RBP6.13□□□□□ -1.43
LINC01238-204ENST00000451070 PKIGQ9Y2B9 76 aa6.13□□□□□ -1.43
LINC01238-204ENST00000451070 IGLV4-69A0A075B6H9 119 aa6.12□□□□□ -1.43
LINC01238-204ENST00000451070 NDUFC2O95298 119 aa6.12□□□□□ -1.43
LINC01238-204ENST00000451070 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
LINC01238-204ENST00000451070 NRACQ8N912 160 aa6.12□□□□□ -1.43
LINC01238-204ENST00000451070 PYGO1Q9Y3Y4 419 aa6.12□□□□□ -1.43
LINC01238-204ENST00000451070 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
LINC01238-204ENST00000451070 VCYO14598 125 aa6.11□□□□□ -1.43
LINC01238-204ENST00000451070 RNASE13Q5GAN3 156 aaKnown RBP6.11□□□□□ -1.43
LINC01238-204ENST00000451070 Q6ZRP5 223 aa6.11□□□□□ -1.43
LINC01238-204ENST00000451070 UBE2D4Q9Y2X8 147 aa6.11□□□□□ -1.43
LINC01238-204ENST00000451070 A0A1B0GXF2 115 aa6.1□□□□□ -1.43
LINC01238-204ENST00000451070 J3QQQ9 107 aa6.1□□□□□ -1.43
LINC01238-204ENST00000451070 COX7A2LO14548 114 aa6.1□□□□□ -1.43
LINC01238-204ENST00000451070 FCER1GP30273 86 aa6.1□□□□□ -1.43
LINC01238-204ENST00000451070 SUMO2P61956 95 aaKnown RBP6.1□□□□□ -1.43
LINC01238-204ENST00000451070 CD164Q04900 197 aa6.1□□□□□ -1.43
LINC01238-204ENST00000451070 REG3GQ6UW15 175 aa6.1□□□□□ -1.43
LINC01238-204ENST00000451070 FAM19A1Q7Z5A9 133 aa6.1□□□□□ -1.43
LINC01238-204ENST00000451070 TRAV13-1A0A0B4J241 112 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 MYMXA0A1B0GTQ4 84 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 FAM236AA0A1B0GUQ0 79 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 FAM236BA0A1B0GV22 79 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 NPYP01303 97 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 ACYP1P07311 99 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 PFN2P35080 140 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 CXCL5P42830 114 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 RIGQ13278 110 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 MRPL51Q4U2R6 128 aaKnown RBP6.09□□□□□ -1.43
LINC01238-204ENST00000451070 LINC00173Q6ZV60 143 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 FAM104AQ969W3 186 aa6.09□□□□□ -1.43
LINC01238-204ENST00000451070 PPP1R17O96001 155 aa6.08□□□□□ -1.44
LINC01238-204ENST00000451070 FAM104BQ5XKR9 115 aa6.08□□□□□ -1.44
LINC01238-204ENST00000451070 C5orf38Q86SI9 138 aa6.08□□□□□ -1.44
LINC01238-204ENST00000451070 C2orf48Q96LS8 159 aa6.08□□□□□ -1.44
LINC01238-204ENST00000451070 CAMK2N2Q96S95 79 aa6.08□□□□□ -1.44
LINC01238-204ENST00000451070 TIMM21Q9BVV7 248 aa6.08□□□□□ -1.44
LINC01238-204ENST00000451070 ATOX1O00244 68 aa6.07□□□□□ -1.44
LINC01238-204ENST00000451070 IGKCP01834 107 aa6.07□□□□□ -1.44
LINC01238-204ENST00000451070 RPL39P62891 51 aaKnown RBP6.07□□□□□ -1.44
LINC01238-204ENST00000451070 C9orf116Q5BN46 136 aaPredicted RBP6.07□□□□□ -1.44
LINC01238-204ENST00000451070 LAMTOR3Q9UHA4 124 aa6.07□□□□□ -1.44
LINC01238-204ENST00000451070 PSORS1C2Q9UIG4 136 aa6.07□□□□□ -1.44
LINC01238-204ENST00000451070 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
LINC01238-204ENST00000451070 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
LINC01238-204ENST00000451070 K7ERJ3 54 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 302.8 ms