RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 CRYGAP11844 174 aa9.05□□□□□ -0.96
SMARCA4-205ENST00000450717 SMIM29Q86T20 159 aa9.04□□□□□ -0.96
SMARCA4-205ENST00000450717 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
SMARCA4-205ENST00000450717 SRCAPQ6ZRS2 3230 aa9.04□□□□□ -0.96
SMARCA4-205ENST00000450717 Q6ZQT0 140 aa9.03□□□□□ -0.96
SMARCA4-205ENST00000450717 SPINK1P00995 79 aa9.03□□□□□ -0.96
SMARCA4-205ENST00000450717 LITAFQ99732 161 aa9.03□□□□□ -0.96
SMARCA4-205ENST00000450717 Q8NAQ8 132 aa9.03□□□□□ -0.96
SMARCA4-205ENST00000450717 MDFIQ99750 246 aa9.03□□□□□ -0.96
SMARCA4-205ENST00000450717 GVQW2A0A096LPI5 108 aaPredicted RBP9.02□□□□□ -0.97
SMARCA4-205ENST00000450717 PRO0628Q9UI54 55 aa9.02□□□□□ -0.97
SMARCA4-205ENST00000450717 Q6ZRX8 168 aa9.01□□□□□ -0.97
SMARCA4-205ENST00000450717 WDR87Q6ZQQ6 2873 aa9.01□□□□□ -0.97
SMARCA4-205ENST00000450717 Q8NBF4 154 aa8.98□□□□□ -0.97
SMARCA4-205ENST00000450717 H3BPC8 53 aa8.97□□□□□ -0.97
SMARCA4-205ENST00000450717 MOBPQ13875 183 aa8.97□□□□□ -0.97
SMARCA4-205ENST00000450717 IGKV2D-30A0A075B6S6 120 aa8.96□□□□□ -0.97
SMARCA4-205ENST00000450717 IGKV2-30P06310 120 aa8.96□□□□□ -0.97
SMARCA4-205ENST00000450717 C16orf90A8MZG2 172 aa8.96□□□□□ -0.98
SMARCA4-205ENST00000450717 C7orf65Q6ZTY9 151 aa8.96□□□□□ -0.98
SMARCA4-205ENST00000450717 LINC00476Q8WZB0 136 aa8.95□□□□□ -0.98
SMARCA4-205ENST00000450717 KRTAP24-1Q3LI83 254 aa8.95□□□□□ -0.98
SMARCA4-205ENST00000450717 ABCA12Q86UK0 2595 aa8.95□□□□□ -0.98
SMARCA4-205ENST00000450717 IGLV6-57P01721 117 aa8.94□□□□□ -0.98
SMARCA4-205ENST00000450717 ACYP2P14621 99 aa8.94□□□□□ -0.98
SMARCA4-205ENST00000450717 RPS28P62857 69 aaKnown RBP8.94□□□□□ -0.98
SMARCA4-205ENST00000450717 USP9XQ93008 2570 aaPredicted RBP8.94□□□□□ -0.98
SMARCA4-205ENST00000450717 LINC00588Q9Y4M8 146 aa8.94□□□□□ -0.98
SMARCA4-205ENST00000450717 C4orf26Q17RF5 130 aa8.93□□□□□ -0.98
SMARCA4-205ENST00000450717 ANKRD11Q6UB99 2663 aaPredicted RBP8.93□□□□□ -0.98
SMARCA4-205ENST00000450717 CSNK1G2-AS1Q8NCQ2 148 aa8.92□□□□□ -0.98
SMARCA4-205ENST00000450717 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
SMARCA4-205ENST00000450717 DNAH10OSP0CZ25 163 aa8.92□□□□□ -0.98
SMARCA4-205ENST00000450717 SPACA4Q8TDM5 124 aa8.91□□□□□ -0.98
SMARCA4-205ENST00000450717 NBDYA0A0U1RRE5 68 aa8.91□□□□□ -0.98
SMARCA4-205ENST00000450717 A0A1B0GU69 56 aa8.91□□□□□ -0.98
SMARCA4-205ENST00000450717 VPREB1P12018 145 aa8.91□□□□□ -0.98
SMARCA4-205ENST00000450717 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
SMARCA4-205ENST00000450717 Q6ZRP5 223 aa8.89□□□□□ -0.99
SMARCA4-205ENST00000450717 LRRK2Q5S007 2527 aa8.89□□□□□ -0.99
SMARCA4-205ENST00000450717 CEP295Q9C0D2 2601 aa8.89□□□□□ -0.99
SMARCA4-205ENST00000450717 DOPEY1Q5JWR5 2465 aa8.89□□□□□ -0.99
SMARCA4-205ENST00000450717 RTL8CO15255 209 aa8.89□□□□□ -0.99
SMARCA4-205ENST00000450717 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
SMARCA4-205ENST00000450717 ST20-AS1Q8NBB2 130 aa8.88□□□□□ -0.99
SMARCA4-205ENST00000450717 JMJD1CQ15652 2540 aa8.86□□□□□ -0.99
SMARCA4-205ENST00000450717 FN1P02751 2386 aaKnown RBP8.86□□□□□ -0.99
SMARCA4-205ENST00000450717 A0A096LNT2 108 aa8.86□□□□□ -0.99
SMARCA4-205ENST00000450717 TLN2Q9Y4G6 2542 aa8.85□□□□□ -0.99
SMARCA4-205ENST00000450717 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
SMARCA4-205ENST00000450717 LINC00313P59037 77 aa8.85□□□□□ -0.99
SMARCA4-205ENST00000450717 MUC4Q99102 2169 aa8.85□□□□□ -0.99
SMARCA4-205ENST00000450717 TM2D3Q9BRN9 247 aa8.84□□□□□ -0.99
SMARCA4-205ENST00000450717 KCNQ1DNQ9H478 68 aa8.84□□□□□ -0.99
SMARCA4-205ENST00000450717 FASNP49327 2511 aaKnown RBP8.84□□□□□ -0.99
SMARCA4-205ENST00000450717 ZNF462Q96JM2 2506 aa8.83□□□□□ -1
SMARCA4-205ENST00000450717 IGLV1-50A0A075B6I6 118 aa8.83□□□□□ -1
SMARCA4-205ENST00000450717 PRR34Q9NV39 138 aa8.83□□□□□ -1
SMARCA4-205ENST00000450717 USP9YO00507 2555 aaPredicted RBP8.83□□□□□ -1
SMARCA4-205ENST00000450717 ERC2-IT1O76042 136 aa8.82□□□□□ -1
SMARCA4-205ENST00000450717 LINC00612Q8N6U2 182 aa8.82□□□□□ -1
SMARCA4-205ENST00000450717 TYMSOSQ8TAI1 123 aa8.81□□□□□ -1
SMARCA4-205ENST00000450717 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
SMARCA4-205ENST00000450717 C8orf87E5RJ46 101 aa8.81□□□□□ -1
SMARCA4-205ENST00000450717 SERTAD4-AS1Q5TG53 156 aa8.8□□□□□ -1
SMARCA4-205ENST00000450717 A8MWP4 228 aa8.8□□□□□ -1
SMARCA4-205ENST00000450717 FAM229AH3BQW9 127 aa8.8□□□□□ -1
SMARCA4-205ENST00000450717 LOC101927531A0A1B0GV80 90 aa8.79□□□□□ -1
SMARCA4-205ENST00000450717 ZFYVE26Q68DK2 2539 aa8.79□□□□□ -1
SMARCA4-205ENST00000450717 CHTF8P0CG12 524 aa8.79□□□□□ -1
SMARCA4-205ENST00000450717 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
SMARCA4-205ENST00000450717 C19orf73Q9NVV2 129 aa8.79□□□□□ -1
SMARCA4-205ENST00000450717 FAM168BA1KXE4 195 aa8.79□□□□□ -1
SMARCA4-205ENST00000450717 GIG44P09565 113 aaPredicted RBP8.79□□□□□ -1
SMARCA4-205ENST00000450717 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
SMARCA4-205ENST00000450717 EIF4EBP3O60516 100 aaPredicted RBP8.78□□□□□ -1
SMARCA4-205ENST00000450717 SPTBN4Q9H254 2564 aa8.76□□□□□ -1.01
SMARCA4-205ENST00000450717 C15orf56Q8N910 161 aa8.76□□□□□ -1.01
SMARCA4-205ENST00000450717 CENPFP49454 3210 aa8.76□□□□□ -1.01
SMARCA4-205ENST00000450717 K7EQZ3 153 aa8.74□□□□□ -1.01
SMARCA4-205ENST00000450717 PLA2G2DQ9UNK4 145 aa8.74□□□□□ -1.01
SMARCA4-205ENST00000450717 KRTAP10-11P60412 298 aa8.74□□□□□ -1.01
SMARCA4-205ENST00000450717 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
SMARCA4-205ENST00000450717 TLX1NBP0CAT3 122 aa8.73□□□□□ -1.01
SMARCA4-205ENST00000450717 Q96NJ1 140 aa8.73□□□□□ -1.01
SMARCA4-205ENST00000450717 ANKRD17O75179 2603 aaKnown RBP8.72□□□□□ -1.01
SMARCA4-205ENST00000450717 SETD2Q9BYW2 2564 aaPredicted RBP8.72□□□□□ -1.01
SMARCA4-205ENST00000450717 WWC2-AS2Q96NR7 200 aa8.71□□□□□ -1.01
SMARCA4-205ENST00000450717 KRTAP10-3P60369 221 aa8.71□□□□□ -1.02
SMARCA4-205ENST00000450717 ATP11AUNQ6ZP68 121 aa8.71□□□□□ -1.02
SMARCA4-205ENST00000450717 PKD1L2Q7Z442 2459 aa8.71□□□□□ -1.02
SMARCA4-205ENST00000450717 IGFL1Q6UW32 110 aa8.71□□□□□ -1.02
SMARCA4-205ENST00000450717 C9orf129Q5T035 196 aaKnown RBP8.7□□□□□ -1.02
SMARCA4-205ENST00000450717 K7EIL1 84 aa8.69□□□□□ -1.02
SMARCA4-205ENST00000450717 PLA2G1BP04054 148 aaKnown RBP8.69□□□□□ -1.02
SMARCA4-205ENST00000450717 Q8N377 158 aa8.68□□□□□ -1.02
SMARCA4-205ENST00000450717 KLKP1Q107X0 134 aa8.67□□□□□ -1.02
SMARCA4-205ENST00000450717 PRR15Q8IV56 129 aa8.66□□□□□ -1.02
SMARCA4-205ENST00000450717 COA5Q86WW8 74 aa8.66□□□□□ -1.02
SMARCA4-205ENST00000450717 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms