RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
USP39-207ENST00000450066 TRBV20-1A0A075B6N2 111 aa9.33□□□□□ -0.92
USP39-207ENST00000450066 SLPIP03973 132 aa9.33□□□□□ -0.92
USP39-207ENST00000450066 COX6CP09669 75 aa9.32□□□□□ -0.92
USP39-207ENST00000450066 H3BMG7 143 aa9.3□□□□□ -0.92
USP39-207ENST00000450066 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
USP39-207ENST00000450066 WFDC2Q14508 124 aa9.3□□□□□ -0.92
USP39-207ENST00000450066 Q8NDZ9 215 aa9.3□□□□□ -0.92
USP39-207ENST00000450066 XAGE1AQ9HD64 81 aa9.3□□□□□ -0.92
USP39-207ENST00000450066 TCL1BO95988 128 aa9.3□□□□□ -0.92
USP39-207ENST00000450066 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
USP39-207ENST00000450066 Q6ZRP5 223 aa9.3□□□□□ -0.92
USP39-207ENST00000450066 RPL28P46779 137 aaKnown RBP9.29□□□□□ -0.92
USP39-207ENST00000450066 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
USP39-207ENST00000450066 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
USP39-207ENST00000450066 OR13C6PQ8NH95 151 aa9.28□□□□□ -0.92
USP39-207ENST00000450066 KMT2AQ03164 3969 aa9.27□□□□□ -0.92
USP39-207ENST00000450066 M0R2N4 97 aa9.27□□□□□ -0.93
USP39-207ENST00000450066 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
USP39-207ENST00000450066 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
USP39-207ENST00000450066 TRBV10-2A0A0K0K1G8 114 aa9.27□□□□□ -0.93
USP39-207ENST00000450066 CNBPP62633 177 aaKnown RBP9.27□□□□□ -0.93
USP39-207ENST00000450066 Q6ZR54 194 aa9.27□□□□□ -0.93
USP39-207ENST00000450066 SMIM11BQ8TCY0 68 aa9.27□□□□□ -0.93
USP39-207ENST00000450066 TMEM126AQ9H061 195 aa9.27□□□□□ -0.93
USP39-207ENST00000450066 NCR3O14931 201 aa9.26□□□□□ -0.93
USP39-207ENST00000450066 ATXN8Q156A1 80 aa9.26□□□□□ -0.93
USP39-207ENST00000450066 LRCOL1A6NCL2 159 aa9.25□□□□□ -0.93
USP39-207ENST00000450066 F8W1H4 67 aa9.25□□□□□ -0.93
USP39-207ENST00000450066 C3orf84H3BNL1 204 aa9.25□□□□□ -0.93
USP39-207ENST00000450066 RPL18AQ02543 176 aaKnown RBP9.25□□□□□ -0.93
USP39-207ENST00000450066 C9orf129Q5T035 196 aaKnown RBP9.24□□□□□ -0.93
USP39-207ENST00000450066 VPREB1P12018 145 aa9.24□□□□□ -0.93
USP39-207ENST00000450066 S100A7L2Q5SY68 101 aa9.24□□□□□ -0.93
USP39-207ENST00000450066 LOC107984640A0A0U1RRK4 108 aa9.23□□□□□ -0.93
USP39-207ENST00000450066 LY6G6CO95867 125 aa9.23□□□□□ -0.93
USP39-207ENST00000450066 CLEC2BQ92478 149 aa9.23□□□□□ -0.93
USP39-207ENST00000450066 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
USP39-207ENST00000450066 LST1O00453 97 aa9.22□□□□□ -0.93
USP39-207ENST00000450066 IGLV6-57P01721 117 aa9.22□□□□□ -0.93
USP39-207ENST00000450066 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
USP39-207ENST00000450066 DNAH6Q9C0G6 4158 aa9.21□□□□□ -0.93
USP39-207ENST00000450066 DNAH2Q9P225 4427 aa9.21□□□□□ -0.94
USP39-207ENST00000450066 H0YGX0 51 aa9.2□□□□□ -0.94
USP39-207ENST00000450066 PLA2G2DQ9UNK4 145 aa9.2□□□□□ -0.94
USP39-207ENST00000450066 M0R378 163 aa9.2□□□□□ -0.94
USP39-207ENST00000450066 LINC01620Q4KN68 170 aa9.2□□□□□ -0.94
USP39-207ENST00000450066 MTURNQ8N3F0 131 aa9.2□□□□□ -0.94
USP39-207ENST00000450066 ALMS1Q8TCU4 4167 aa9.2□□□□□ -0.94
USP39-207ENST00000450066 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.19□□□□□ -0.94
USP39-207ENST00000450066 GAGE2BQ13066 116 aa9.19□□□□□ -0.94
USP39-207ENST00000450066 TRBV10-3A0A0K0K1G6 114 aa9.18□□□□□ -0.94
USP39-207ENST00000450066 C9JAW5 83 aa9.18□□□□□ -0.94
USP39-207ENST00000450066 SMCPP49901 116 aaPredicted RBP9.17□□□□□ -0.94
USP39-207ENST00000450066 Q8N814 137 aa9.17□□□□□ -0.94
USP39-207ENST00000450066 TRACP01848 142 aa9.17□□□□□ -0.94
USP39-207ENST00000450066 C1orf134Q5TEV5 83 aa9.17□□□□□ -0.94
USP39-207ENST00000450066 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
USP39-207ENST00000450066 FAM218AQ96MZ4 157 aa9.17□□□□□ -0.94
USP39-207ENST00000450066 A0A087WTM6 91 aa9.16□□□□□ -0.94
USP39-207ENST00000450066 SLC25A20O43772 301 aa9.16□□□□□ -0.94
USP39-207ENST00000450066 NKAPP1Q8N9T2 125 aa9.16□□□□□ -0.94
USP39-207ENST00000450066 IGLV5-37A0A075B6J1 123 aa9.16□□□□□ -0.94
USP39-207ENST00000450066 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
USP39-207ENST00000450066 C6orf99Q4VX62 202 aa9.16□□□□□ -0.94
USP39-207ENST00000450066 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
USP39-207ENST00000450066 TRAV23DV6A0A075B6W5 121 aa9.15□□□□□ -0.94
USP39-207ENST00000450066 M0QXV9 152 aa9.14□□□□□ -0.95
USP39-207ENST00000450066 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
USP39-207ENST00000450066 CBY1Q9Y3M2 126 aa9.14□□□□□ -0.95
USP39-207ENST00000450066 HECTD4Q9Y4D8 3996 aa9.14□□□□□ -0.95
USP39-207ENST00000450066 A0A096LNI7 61 aa9.14□□□□□ -0.95
USP39-207ENST00000450066 FAM168BA1KXE4 195 aa9.14□□□□□ -0.95
USP39-207ENST00000450066 LINC01600Q96MT4 127 aa9.14□□□□□ -0.95
USP39-207ENST00000450066 A0A087WYN8 130 aa9.13□□□□□ -0.95
USP39-207ENST00000450066 ETDBQ3ZM63 59 aa9.12□□□□□ -0.95
USP39-207ENST00000450066 KRTAP7-1Q8IUC3 87 aa9.12□□□□□ -0.95
USP39-207ENST00000450066 ANKRD29Q8N6D5 301 aa9.12□□□□□ -0.95
USP39-207ENST00000450066 C7orf33Q8WU49 177 aa9.12□□□□□ -0.95
USP39-207ENST00000450066 ZNF73O43830 326 aaPredicted RBP9.12□□□□□ -0.95
USP39-207ENST00000450066 H3BT86 120 aa9.11□□□□□ -0.95
USP39-207ENST00000450066 DIRC1Q969H9 104 aa9.11□□□□□ -0.95
USP39-207ENST00000450066 IGKV2-24A0A0C4DH68 120 aa9.11□□□□□ -0.95
USP39-207ENST00000450066 A0A1B0GX51 115 aa9.11□□□□□ -0.95
USP39-207ENST00000450066 SDIM1Q6ZPB5 146 aa9.11□□□□□ -0.95
USP39-207ENST00000450066 C22orf24Q9Y442 160 aa9.11□□□□□ -0.95
USP39-207ENST00000450066 TRBV7-6A0A0J9YX20 115 aa9.1□□□□□ -0.95
USP39-207ENST00000450066 FAM19A5Q7Z5A7 132 aaPredicted RBP9.1□□□□□ -0.95
USP39-207ENST00000450066 KCNQ1DNQ9H478 68 aa9.1□□□□□ -0.95
USP39-207ENST00000450066 DNAL4O96015 105 aa9.09□□□□□ -0.95
USP39-207ENST00000450066 DNAH17Q9UFH2 4485 aa9.09□□□□□ -0.95
USP39-207ENST00000450066 OCIAD2Q56VL3 154 aa9.09□□□□□ -0.95
USP39-207ENST00000450066 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.95
USP39-207ENST00000450066 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
USP39-207ENST00000450066 FRAS1Q86XX4 4008 aa9.09□□□□□ -0.95
USP39-207ENST00000450066 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
USP39-207ENST00000450066 IGLV1-50A0A075B6I6 118 aa9.08□□□□□ -0.96
USP39-207ENST00000450066 SNCGO76070 127 aa9.08□□□□□ -0.96
USP39-207ENST00000450066 LINC00575Q6W349 94 aa9.08□□□□□ -0.96
USP39-207ENST00000450066 LINC00167Q96N53 147 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms