RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 IGLV5-37A0A075B6J1 123 aa10.88□□□□□ -0.67
RFTN1-205ENST00000449415 MEIG1Q5JSS6 88 aa10.86□□□□□ -0.67
RFTN1-205ENST00000449415 IGKV2-28A0A075B6P5 120 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 ZNF861PO60384 105 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 DPM2O94777 84 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 IGKV2D-28P01615 120 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 SMIM13P0DJ93 91 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 VPREB1P12018 145 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 PLNP26678 52 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 Q8NDZ9 215 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 MAP1LC3CQ9BXW4 147 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 TNXBP22105 4242 aa10.85□□□□□ -0.67
RFTN1-205ENST00000449415 BCE1O60756 84 aa10.84□□□□□ -0.67
RFTN1-205ENST00000449415 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
RFTN1-205ENST00000449415 NDUFA12Q9UI09 145 aa10.84□□□□□ -0.67
RFTN1-205ENST00000449415 ATP6V1G1O75348 118 aa10.83□□□□□ -0.68
RFTN1-205ENST00000449415 IGKCP01834 107 aa10.83□□□□□ -0.68
RFTN1-205ENST00000449415 TSPEAR-AS2P59090 65 aa10.83□□□□□ -0.68
RFTN1-205ENST00000449415 PRR26Q8N8Z3 221 aa10.83□□□□□ -0.68
RFTN1-205ENST00000449415 LEPROTO15243 131 aa10.82□□□□□ -0.68
RFTN1-205ENST00000449415 MYMXA0A1B0GTQ4 84 aa10.81□□□□□ -0.68
RFTN1-205ENST00000449415 HERVK_113P61574 105 aa10.81□□□□□ -0.68
RFTN1-205ENST00000449415 HERV-K104P63124 156 aa10.81□□□□□ -0.68
RFTN1-205ENST00000449415 PLEKHB2Q96CS7 222 aa10.81□□□□□ -0.68
RFTN1-205ENST00000449415 KRTAP1-4P0C5Y4 121 aa10.8□□□□□ -0.68
RFTN1-205ENST00000449415 RPL28P46779 137 aaKnown RBP10.8□□□□□ -0.68
RFTN1-205ENST00000449415 MIR7-3HGQ8N6C7 128 aa10.8□□□□□ -0.68
RFTN1-205ENST00000449415 IGLV1-50A0A075B6I6 118 aa10.78□□□□□ -0.68
RFTN1-205ENST00000449415 J3QQQ9 107 aa10.78□□□□□ -0.68
RFTN1-205ENST00000449415 UBE2AP49459 152 aa10.78□□□□□ -0.68
RFTN1-205ENST00000449415 TMEM238C9JI98 176 aa10.77□□□□□ -0.69
RFTN1-205ENST00000449415 SYS1-DBNDD2H3BUS1 97 aa10.77□□□□□ -0.69
RFTN1-205ENST00000449415 LGALS3P17931 250 aaKnown RBP10.77□□□□□ -0.69
RFTN1-205ENST00000449415 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.69
RFTN1-205ENST00000449415 LINC00587B1AMM8 73 aa10.75□□□□□ -0.69
RFTN1-205ENST00000449415 DAND5Q8N907 189 aa10.75□□□□□ -0.69
RFTN1-205ENST00000449415 TMEM126AQ9H061 195 aa10.75□□□□□ -0.69
RFTN1-205ENST00000449415 NCR3O14931 201 aa10.74□□□□□ -0.69
RFTN1-205ENST00000449415 PRLHP81277 87 aa10.74□□□□□ -0.69
RFTN1-205ENST00000449415 FAM19A1Q7Z5A9 133 aa10.74□□□□□ -0.69
RFTN1-205ENST00000449415 HMCN2Q8NDA2 5059 aa10.74□□□□□ -0.69
RFTN1-205ENST00000449415 M0R378 163 aa10.73□□□□□ -0.69
RFTN1-205ENST00000449415 KRTAP13-1Q8IUC0 172 aa10.73□□□□□ -0.69
RFTN1-205ENST00000449415 NMUP48645 174 aa10.72□□□□□ -0.69
RFTN1-205ENST00000449415 E9PLD3 99 aa10.71□□□□□ -0.69
RFTN1-205ENST00000449415 C3orf79P0CE67 100 aa10.71□□□□□ -0.69
RFTN1-205ENST00000449415 COA6Q5JTJ3 125 aaKnown RBP10.71□□□□□ -0.69
RFTN1-205ENST00000449415 LINC01545Q5VT33 79 aa10.71□□□□□ -0.69
RFTN1-205ENST00000449415 PET117Q6UWS5 81 aa10.71□□□□□ -0.69
RFTN1-205ENST00000449415 KRTDAPP60985 99 aa10.7□□□□□ -0.7
RFTN1-205ENST00000449415 RPL13AP40429 203 aaKnown RBP10.69□□□□□ -0.7
RFTN1-205ENST00000449415 ANAPC11Q9NYG5 84 aa10.69□□□□□ -0.7
RFTN1-205ENST00000449415 A0A0J9YXY3 114 aa10.67□□□□□ -0.7
RFTN1-205ENST00000449415 NPC2P61916 151 aa10.67□□□□□ -0.7
RFTN1-205ENST00000449415 A0A087X002 238 aa10.66□□□□□ -0.7
RFTN1-205ENST00000449415 S100A1P23297 94 aa10.66□□□□□ -0.7
RFTN1-205ENST00000449415 MIEN1Q9BRT3 115 aa10.66□□□□□ -0.7
RFTN1-205ENST00000449415 IGKV2D-26A0A0A0MRZ7 120 aa10.65□□□□□ -0.7
RFTN1-205ENST00000449415 TRBV10-3A0A0K0K1G6 114 aa10.65□□□□□ -0.7
RFTN1-205ENST00000449415 LOC107984156A0A0G2JMH3 177 aa10.64□□□□□ -0.71
RFTN1-205ENST00000449415 PRYO14603 147 aa10.64□□□□□ -0.71
RFTN1-205ENST00000449415 CRYGAP11844 174 aa10.64□□□□□ -0.71
RFTN1-205ENST00000449415 ADAMTSL4-AS1Q5T5F5 129 aa10.64□□□□□ -0.71
RFTN1-205ENST00000449415 ARL17AQ8IVW1 177 aa10.64□□□□□ -0.71
RFTN1-205ENST00000449415 HIGD2AQ9BW72 106 aa10.64□□□□□ -0.71
RFTN1-205ENST00000449415 SOSTDC1Q6X4U4 206 aa10.62□□□□□ -0.71
RFTN1-205ENST00000449415 TTTY13Q9BZ97 58 aa10.62□□□□□ -0.71
RFTN1-205ENST00000449415 KCNQ1DNQ9H478 68 aa10.62□□□□□ -0.71
RFTN1-205ENST00000449415 ZNF815PA8K554 130 aa10.61□□□□□ -0.71
RFTN1-205ENST00000449415 EIF4EBP3O60516 100 aaPredicted RBP10.61□□□□□ -0.71
RFTN1-205ENST00000449415 TYMSOSQ8TAI1 123 aa10.61□□□□□ -0.71
RFTN1-205ENST00000449415 C20orf202A1L168 122 aa10.6□□□□□ -0.71
RFTN1-205ENST00000449415 DDTP30046 118 aa10.6□□□□□ -0.71
RFTN1-205ENST00000449415 ATOH7Q8N100 152 aa10.6□□□□□ -0.71
RFTN1-205ENST00000449415 ETDCA0A1B0GVM5 59 aa10.59□□□□□ -0.71
RFTN1-205ENST00000449415 KRTAP13-2Q52LG2 175 aa10.59□□□□□ -0.71
RFTN1-205ENST00000449415 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
RFTN1-205ENST00000449415 TRBV10-2A0A0K0K1G8 114 aa10.58□□□□□ -0.72
RFTN1-205ENST00000449415 SPRR1AP35321 89 aa10.58□□□□□ -0.72
RFTN1-205ENST00000449415 S100A12P80511 92 aa10.58□□□□□ -0.72
RFTN1-205ENST00000449415 LINC00337Q8N6G1 96 aa10.58□□□□□ -0.72
RFTN1-205ENST00000449415 NDUFC2O95298 119 aa10.57□□□□□ -0.72
RFTN1-205ENST00000449415 TSPAN13O95857 204 aa10.57□□□□□ -0.72
RFTN1-205ENST00000449415 FAM229BQ4G0N7 80 aa10.57□□□□□ -0.72
RFTN1-205ENST00000449415 S100A7L2Q5SY68 101 aa10.57□□□□□ -0.72
RFTN1-205ENST00000449415 LITAFQ99732 161 aa10.57□□□□□ -0.72
RFTN1-205ENST00000449415 KRTAP4-16G5E9R7 235 aaPredicted RBP10.56□□□□□ -0.72
RFTN1-205ENST00000449415 ANKRD39Q53RE8 183 aa10.56□□□□□ -0.72
RFTN1-205ENST00000449415 HIST3H2BBQ8N257 126 aa10.55□□□□□ -0.72
RFTN1-205ENST00000449415 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
RFTN1-205ENST00000449415 TIMM17BO60830 172 aa10.54□□□□□ -0.72
RFTN1-205ENST00000449415 S100A2P29034 98 aa10.54□□□□□ -0.72
RFTN1-205ENST00000449415 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
RFTN1-205ENST00000449415 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
RFTN1-205ENST00000449415 B5MCH6 92 aa10.52□□□□□ -0.73
RFTN1-205ENST00000449415 IGLV6-57P01721 117 aa10.52□□□□□ -0.73
RFTN1-205ENST00000449415 C3orf22Q8N5N4 141 aa10.52□□□□□ -0.73
RFTN1-205ENST00000449415 HIST1H2BLQ99880 126 aa10.52□□□□□ -0.73
RFTN1-205ENST00000449415 TRAV23DV6A0A075B6W5 121 aa10.51□□□□□ -0.73
RFTN1-205ENST00000449415 S100A6P06703 90 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms