RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 NCR3O14931 201 aa7.74□□□□□ -1.17
RFX3-208ENST00000449234 SLPIP03973 132 aa7.74□□□□□ -1.17
RFX3-208ENST00000449234 PRR3P79522 188 aaKnown RBP7.74□□□□□ -1.17
RFX3-208ENST00000449234 C6orf223Q8N319 242 aa7.74□□□□□ -1.17
RFX3-208ENST00000449234 SPATA3Q8NHX4 192 aa7.74□□□□□ -1.17
RFX3-208ENST00000449234 BCE1O60756 84 aa7.73□□□□□ -1.17
RFX3-208ENST00000449234 COX7CP15954 63 aa7.73□□□□□ -1.17
RFX3-208ENST00000449234 EGFEM1PQ0D2K5 195 aa7.73□□□□□ -1.17
RFX3-208ENST00000449234 C9orf116Q5BN46 136 aaPredicted RBP7.73□□□□□ -1.17
RFX3-208ENST00000449234 C9orf129Q5T035 196 aaKnown RBP7.73□□□□□ -1.17
RFX3-208ENST00000449234 CCDC168Q8NDH2 2452 aa7.73□□□□□ -1.17
RFX3-208ENST00000449234 C2CD3Q4AC94 2353 aa7.73□□□□□ -1.17
RFX3-208ENST00000449234 RBM3P98179 157 aaKnown RBP7.72□□□□□ -1.17
RFX3-208ENST00000449234 RPL18AQ02543 176 aaKnown RBP7.72□□□□□ -1.17
RFX3-208ENST00000449234 C10orf25Q5T742 122 aa7.72□□□□□ -1.17
RFX3-208ENST00000449234 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.72□□□□□ -1.17
RFX3-208ENST00000449234 NF1P21359 2839 aa7.71□□□□□ -1.17
RFX3-208ENST00000449234 HTN3P15516 51 aa7.71□□□□□ -1.18
RFX3-208ENST00000449234 M0R378 163 aa7.7□□□□□ -1.18
RFX3-208ENST00000449234 KPRPQ5T749 579 aaPredicted RBP7.7□□□□□ -1.18
RFX3-208ENST00000449234 KRTAP26-1Q6PEX3 210 aa7.7□□□□□ -1.18
RFX3-208ENST00000449234 DIRC1Q969H9 104 aa7.7□□□□□ -1.18
RFX3-208ENST00000449234 UBL5Q9BZL1 73 aa7.7□□□□□ -1.18
RFX3-208ENST00000449234 C6orf48Q9UBA6 75 aa7.7□□□□□ -1.18
RFX3-208ENST00000449234 JMJD1CQ15652 2540 aa7.69□□□□□ -1.18
RFX3-208ENST00000449234 CRYGAP11844 174 aa7.69□□□□□ -1.18
RFX3-208ENST00000449234 SS18L2Q9UHA2 77 aa7.69□□□□□ -1.18
RFX3-208ENST00000449234 CSMD2Q7Z408 3487 aa7.68□□□□□ -1.18
RFX3-208ENST00000449234 ACANP16112 2415 aa7.68□□□□□ -1.18
RFX3-208ENST00000449234 TRAV23DV6A0A075B6W5 121 aa7.68□□□□□ -1.18
RFX3-208ENST00000449234 COX7BP24311 80 aa7.68□□□□□ -1.18
RFX3-208ENST00000449234 C9orf153Q5TBE3 101 aa7.68□□□□□ -1.18
RFX3-208ENST00000449234 Q6ZQT0 140 aa7.68□□□□□ -1.18
RFX3-208ENST00000449234 Q8NDZ9 215 aa7.68□□□□□ -1.18
RFX3-208ENST00000449234 LINC01556Q5JQF7 62 aa7.67□□□□□ -1.18
RFX3-208ENST00000449234 SERP2Q8N6R1 65 aa7.67□□□□□ -1.18
RFX3-208ENST00000449234 CAMK2N2Q96S95 79 aa7.67□□□□□ -1.18
RFX3-208ENST00000449234 TENM4Q6N022 2769 aa7.67□□□□□ -1.18
RFX3-208ENST00000449234 IGKV3D-7A0A0C4DH55 119 aa7.66□□□□□ -1.18
RFX3-208ENST00000449234 VPREB1P12018 145 aa7.66□□□□□ -1.18
RFX3-208ENST00000449234 DSCR8Q96T75 97 aa7.66□□□□□ -1.18
RFX3-208ENST00000449234 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
RFX3-208ENST00000449234 KMT2BQ9UMN6 2715 aaPredicted RBP7.65□□□□□ -1.18
RFX3-208ENST00000449234 NDUFC2-KCTD14E9PQ53 114 aa7.65□□□□□ -1.18
RFX3-208ENST00000449234 ZNF73O43830 326 aaPredicted RBP7.65□□□□□ -1.18
RFX3-208ENST00000449234 ELOF1P60002 83 aaKnown RBP7.65□□□□□ -1.18
RFX3-208ENST00000449234 UNC79Q9P2D8 2635 aa7.65□□□□□ -1.18
RFX3-208ENST00000449234 LAMTOR3Q9UHA4 124 aa7.65□□□□□ -1.18
RFX3-208ENST00000449234 USP17L23D6RBM5 183 aa7.64□□□□□ -1.19
RFX3-208ENST00000449234 MTORP42345 2549 aa7.63□□□□□ -1.19
RFX3-208ENST00000449234 ZNF469Q96JG9 3925 aaPredicted RBP7.63□□□□□ -1.19
RFX3-208ENST00000449234 ESRGQ1W209 222 aa7.63□□□□□ -1.19
RFX3-208ENST00000449234 Q6ZQY7 126 aa7.63□□□□□ -1.19
RFX3-208ENST00000449234 WFDC10BQ8IUB3 73 aa7.63□□□□□ -1.19
RFX3-208ENST00000449234 SMIM20Q8N5G0 67 aa7.63□□□□□ -1.19
RFX3-208ENST00000449234 C1orf43Q9BWL3 253 aa7.63□□□□□ -1.19
RFX3-208ENST00000449234 PLA2G2DQ9UNK4 145 aa7.63□□□□□ -1.19
RFX3-208ENST00000449234 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
RFX3-208ENST00000449234 ITPR2Q14571 2701 aa7.61□□□□□ -1.19
RFX3-208ENST00000449234 TRBV7-4A0A0J9YYF1 115 aa7.61□□□□□ -1.19
RFX3-208ENST00000449234 KRTAP10-11P60412 298 aa7.61□□□□□ -1.19
RFX3-208ENST00000449234 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
RFX3-208ENST00000449234 CXCL6P80162 114 aa7.61□□□□□ -1.19
RFX3-208ENST00000449234 Q6ZRU5 148 aa7.61□□□□□ -1.19
RFX3-208ENST00000449234 C15orf56Q8N910 161 aa7.61□□□□□ -1.19
RFX3-208ENST00000449234 SETD2Q9BYW2 2564 aaPredicted RBP7.6□□□□□ -1.19
RFX3-208ENST00000449234 A0A1B0GW54 56 aa7.6□□□□□ -1.19
RFX3-208ENST00000449234 DNAH10OSP0CZ25 163 aa7.6□□□□□ -1.19
RFX3-208ENST00000449234 SYCNQ0VAF6 134 aa7.6□□□□□ -1.19
RFX3-208ENST00000449234 Q6ZTC4 211 aa7.6□□□□□ -1.19
RFX3-208ENST00000449234 DEFB131BA0A096LNP1 70 aa7.59□□□□□ -1.19
RFX3-208ENST00000449234 C11orf45Q8TAV5 145 aa7.59□□□□□ -1.19
RFX3-208ENST00000449234 XAGE1AQ9HD64 81 aa7.59□□□□□ -1.19
RFX3-208ENST00000449234 FN1P02751 2386 aaKnown RBP7.58□□□□□ -1.2
RFX3-208ENST00000449234 SVIPQ8NHG7 77 aa7.58□□□□□ -1.2
RFX3-208ENST00000449234 RMI2Q96E14 147 aa7.58□□□□□ -1.2
RFX3-208ENST00000449234 UPK3BQ9BT76 320 aa7.58□□□□□ -1.2
RFX3-208ENST00000449234 KCNQ1DNQ9H478 68 aa7.58□□□□□ -1.2
RFX3-208ENST00000449234 IGLV5-37A0A075B6J1 123 aa7.57□□□□□ -1.2
RFX3-208ENST00000449234 HIGD2BQ4VC39 106 aa7.57□□□□□ -1.2
RFX3-208ENST00000449234 TRAV10A0A0B4J240 114 aa7.56□□□□□ -1.2
RFX3-208ENST00000449234 LOC107984640A0A0U1RRK4 108 aa7.56□□□□□ -1.2
RFX3-208ENST00000449234 TMEM258P61165 79 aa7.56□□□□□ -1.2
RFX3-208ENST00000449234 Q6ZVQ6 151 aa7.56□□□□□ -1.2
RFX3-208ENST00000449234 NIPBLQ6KC79 2804 aaeCLIP7.56□□□□□ -1.2
RFX3-208ENST00000449234 IGKV2D-24A0A075B6R9 120 aa7.55□□□□□ -1.2
RFX3-208ENST00000449234 TRAV7A0A075B6U4 112 aa7.55□□□□□ -1.2
RFX3-208ENST00000449234 A0A087WVE0 104 aa7.55□□□□□ -1.2
RFX3-208ENST00000449234 LINC01547P58512 204 aaPredicted RBP7.55□□□□□ -1.2
RFX3-208ENST00000449234 RETNQ9HD89 108 aa7.55□□□□□ -1.2
RFX3-208ENST00000449234 HELZ2Q9BYK8 2649 aaKnown RBP7.54□□□□□ -1.2
RFX3-208ENST00000449234 NOTCH2Q04721 2471 aa7.54□□□□□ -1.2
RFX3-208ENST00000449234 C3orf56Q8N813 242 aa7.54□□□□□ -1.2
RFX3-208ENST00000449234 DHRS4-AS1Q9P1J3 65 aa7.54□□□□□ -1.2
RFX3-208ENST00000449234 FASNP49327 2511 aaKnown RBP7.54□□□□□ -1.2
RFX3-208ENST00000449234 Q6ZRP5 223 aa7.53□□□□□ -1.2
RFX3-208ENST00000449234 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
RFX3-208ENST00000449234 NKAPP1Q8N9T2 125 aa7.53□□□□□ -1.2
RFX3-208ENST00000449234 MRAPQ8TCY5 172 aa7.53□□□□□ -1.2
RFX3-208ENST00000449234 PRYO14603 147 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms