RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 OCIAD2Q56VL3 154 aa7.03□□□□□ -1.28
VIPAS39-203ENST00000448935 C10orf25Q5T742 122 aa7.03□□□□□ -1.28
VIPAS39-203ENST00000448935 UBE2DNLQ8IWF7 75 aa7.03□□□□□ -1.28
VIPAS39-203ENST00000448935 LINC00337Q8N6G1 96 aa7.03□□□□□ -1.28
VIPAS39-203ENST00000448935 C15orf56Q8N910 161 aa7.03□□□□□ -1.28
VIPAS39-203ENST00000448935 MEGF8Q7Z7M0 2845 aa7.03□□□□□ -1.28
VIPAS39-203ENST00000448935 PRYO14603 147 aa7.02□□□□□ -1.29
VIPAS39-203ENST00000448935 LINC01620Q4KN68 170 aa7.02□□□□□ -1.29
VIPAS39-203ENST00000448935 C9orf116Q5BN46 136 aaPredicted RBP7.02□□□□□ -1.29
VIPAS39-203ENST00000448935 OR13C6PQ8NH95 151 aa7.02□□□□□ -1.29
VIPAS39-203ENST00000448935 LINC00526Q96FQ7 95 aa7.02□□□□□ -1.29
VIPAS39-203ENST00000448935 C6orf48Q9UBA6 75 aa7.02□□□□□ -1.29
VIPAS39-203ENST00000448935 APLNQ9ULZ1 77 aa7.02□□□□□ -1.29
VIPAS39-203ENST00000448935 C9JAW5 83 aa7.01□□□□□ -1.29
VIPAS39-203ENST00000448935 LST1O00453 97 aa7.01□□□□□ -1.29
VIPAS39-203ENST00000448935 HUWE1Q7Z6Z7 4374 aaKnown RBP7.01□□□□□ -1.29
VIPAS39-203ENST00000448935 H0YGX0 51 aa7.01□□□□□ -1.29
VIPAS39-203ENST00000448935 J3QR89 54 aa7.01□□□□□ -1.29
VIPAS39-203ENST00000448935 SLC25A20O43772 301 aa7.01□□□□□ -1.29
VIPAS39-203ENST00000448935 SERTAD4-AS1Q5TG53 156 aa7.01□□□□□ -1.29
VIPAS39-203ENST00000448935 TMEM126AQ9H061 195 aa7.01□□□□□ -1.29
VIPAS39-203ENST00000448935 TGP01266 2768 aa7□□□□□ -1.29
VIPAS39-203ENST00000448935 TRBV10-2A0A0K0K1G8 114 aa7□□□□□ -1.29
VIPAS39-203ENST00000448935 SYCNQ0VAF6 134 aa7□□□□□ -1.29
VIPAS39-203ENST00000448935 MTURNQ8N3F0 131 aa7□□□□□ -1.29
VIPAS39-203ENST00000448935 ETDBQ3ZM63 59 aa6.99□□□□□ -1.29
VIPAS39-203ENST00000448935 Q6ZRU5 148 aa6.99□□□□□ -1.29
VIPAS39-203ENST00000448935 SMIM11BQ8TCY0 68 aa6.99□□□□□ -1.29
VIPAS39-203ENST00000448935 CLEC2BQ92478 149 aa6.99□□□□□ -1.29
VIPAS39-203ENST00000448935 CARD19Q96LW7 228 aa6.99□□□□□ -1.29
VIPAS39-203ENST00000448935 LINC01600Q96MT4 127 aa6.99□□□□□ -1.29
VIPAS39-203ENST00000448935 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
VIPAS39-203ENST00000448935 H3BT86 120 aa6.98□□□□□ -1.29
VIPAS39-203ENST00000448935 TRACP01848 142 aa6.98□□□□□ -1.29
VIPAS39-203ENST00000448935 ANKRD29Q8N6D5 301 aa6.98□□□□□ -1.29
VIPAS39-203ENST00000448935 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
VIPAS39-203ENST00000448935 TEN1Q86WV5 123 aa6.98□□□□□ -1.29
VIPAS39-203ENST00000448935 USP17L23D6RBM5 183 aa6.97□□□□□ -1.29
VIPAS39-203ENST00000448935 TTC32Q5I0X7 151 aa6.97□□□□□ -1.29
VIPAS39-203ENST00000448935 CBY1Q9Y3M2 126 aa6.96□□□□□ -1.3
VIPAS39-203ENST00000448935 NCR3O14931 201 aa6.95□□□□□ -1.3
VIPAS39-203ENST00000448935 SNCGO76070 127 aa6.95□□□□□ -1.3
VIPAS39-203ENST00000448935 TLX1NBP0CAT3 122 aa6.95□□□□□ -1.3
VIPAS39-203ENST00000448935 PPDPFLQ8WWR9 84 aa6.95□□□□□ -1.3
VIPAS39-203ENST00000448935 A0A1B0GX51 115 aa6.94□□□□□ -1.3
VIPAS39-203ENST00000448935 DNAL4O96015 105 aa6.94□□□□□ -1.3
VIPAS39-203ENST00000448935 PSCAO43653 123 aa6.94□□□□□ -1.3
VIPAS39-203ENST00000448935 PRR3P79522 188 aaKnown RBP6.94□□□□□ -1.3
VIPAS39-203ENST00000448935 WWC2-AS2Q96NR7 200 aa6.94□□□□□ -1.3
VIPAS39-203ENST00000448935 XAGE1AQ9HD64 81 aa6.94□□□□□ -1.3
VIPAS39-203ENST00000448935 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
VIPAS39-203ENST00000448935 DNAH9Q9NYC9 4486 aa6.93□□□□□ -1.3
VIPAS39-203ENST00000448935 M0R378 163 aa6.92□□□□□ -1.3
VIPAS39-203ENST00000448935 IGLV6-57P01721 117 aa6.92□□□□□ -1.3
VIPAS39-203ENST00000448935 RPL18AQ02543 176 aaKnown RBP6.92□□□□□ -1.3
VIPAS39-203ENST00000448935 VPREB1P12018 145 aa6.91□□□□□ -1.3
VIPAS39-203ENST00000448935 GAGE2EQ4V326 116 aa6.91□□□□□ -1.3
VIPAS39-203ENST00000448935 Q6ZRP5 223 aa6.91□□□□□ -1.3
VIPAS39-203ENST00000448935 Q8NDZ9 215 aa6.91□□□□□ -1.3
VIPAS39-203ENST00000448935 FAM218AQ96MZ4 157 aa6.91□□□□□ -1.3
VIPAS39-203ENST00000448935 VPS25Q9BRG1 176 aa6.91□□□□□ -1.3
VIPAS39-203ENST00000448935 GAGE2DQ9UEU5 116 aa6.91□□□□□ -1.3
VIPAS39-203ENST00000448935 NBDYA0A0U1RRE5 68 aa6.9□□□□□ -1.3
VIPAS39-203ENST00000448935 CASC10Q5T4H9 136 aa6.9□□□□□ -1.3
VIPAS39-203ENST00000448935 COL7A1Q02388 2944 aa6.9□□□□□ -1.31
VIPAS39-203ENST00000448935 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.31
VIPAS39-203ENST00000448935 C6orf99Q4VX62 202 aa6.9□□□□□ -1.31
VIPAS39-203ENST00000448935 KRTAP1-5Q9BYS1 174 aa6.9□□□□□ -1.31
VIPAS39-203ENST00000448935 STAB2Q8WWQ8 2551 aa6.89□□□□□ -1.31
VIPAS39-203ENST00000448935 TRAV23DV6A0A075B6W5 121 aa6.89□□□□□ -1.31
VIPAS39-203ENST00000448935 LOC107984640A0A0U1RRK4 108 aa6.89□□□□□ -1.31
VIPAS39-203ENST00000448935 A0A087WYN8 130 aa6.88□□□□□ -1.31
VIPAS39-203ENST00000448935 TRBV10-3A0A0K0K1G6 114 aa6.88□□□□□ -1.31
VIPAS39-203ENST00000448935 LECT2O14960 151 aa6.88□□□□□ -1.31
VIPAS39-203ENST00000448935 SLPIP03973 132 aa6.88□□□□□ -1.31
VIPAS39-203ENST00000448935 NKAPP1Q8N9T2 125 aa6.88□□□□□ -1.31
VIPAS39-203ENST00000448935 DIRC1Q969H9 104 aa6.88□□□□□ -1.31
VIPAS39-203ENST00000448935 PKIGQ9Y2B9 76 aa6.88□□□□□ -1.31
VIPAS39-203ENST00000448935 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
VIPAS39-203ENST00000448935 CNBPP62633 177 aaKnown RBP6.87□□□□□ -1.31
VIPAS39-203ENST00000448935 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
VIPAS39-203ENST00000448935 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
VIPAS39-203ENST00000448935 Q8N814 137 aa6.87□□□□□ -1.31
VIPAS39-203ENST00000448935 ORMDL1Q9P0S3 153 aa6.87□□□□□ -1.31
VIPAS39-203ENST00000448935 H3BQ85 93 aa6.86□□□□□ -1.31
VIPAS39-203ENST00000448935 LINC00167Q96N53 147 aa6.86□□□□□ -1.31
VIPAS39-203ENST00000448935 IGLV5-37A0A075B6J1 123 aa6.85□□□□□ -1.31
VIPAS39-203ENST00000448935 TEX49A0A1B0GTD5 131 aa6.85□□□□□ -1.31
VIPAS39-203ENST00000448935 ZNF73O43830 326 aaPredicted RBP6.85□□□□□ -1.31
VIPAS39-203ENST00000448935 LINC00575Q6W349 94 aa6.85□□□□□ -1.31
VIPAS39-203ENST00000448935 hADV29S1A0JD25 119 aa6.84□□□□□ -1.31
VIPAS39-203ENST00000448935 INAFM2P0DMQ5 153 aa6.84□□□□□ -1.31
VIPAS39-203ENST00000448935 GAGE2BQ13066 116 aa6.84□□□□□ -1.31
VIPAS39-203ENST00000448935 TMEM256-PLSCR3K7ERE1 68 aa6.83□□□□□ -1.32
VIPAS39-203ENST00000448935 COX7BP24311 80 aa6.83□□□□□ -1.32
VIPAS39-203ENST00000448935 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
VIPAS39-203ENST00000448935 ELOF1P60002 83 aaKnown RBP6.82□□□□□ -1.32
VIPAS39-203ENST00000448935 KCNQ1DNQ9H478 68 aa6.82□□□□□ -1.32
VIPAS39-203ENST00000448935 C7orf33Q8WU49 177 aa6.81□□□□□ -1.32
VIPAS39-203ENST00000448935 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms